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PROSITE entry PS00332


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General information about the entry

Entry name [info] SOD_CU_ZN_2
Accession [info] PS00332
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00082

Name and characterization of the entry

Description [info] Copper/Zinc superoxide dismutase signature 2.
Pattern [info] 
G-[GNHD]-[SGA]-[GR]-x-R-x-[SGAWRV]-C-x(2)-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 165 in 165 different sequences
Number of true positive hits 163 in 163 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 18
Precision (true positives / (true positives + false positives)) 98.79 %
Recall (true positives / (true positives + false negatives)) 94.77 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] disulfide at position 9
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 163 sequences 

CCS_HUMAN   (O14618), CCS_MOUSE   (Q9WU84), CCS_PIG (Q6PWT7), 

CCS_RAT (Q9JK72), SOD1A_XENLA (P13926), SOD1B_XENLA (P15107), 
SODC1_AQUAE (O67149), SODC1_ARATH (P24704), SODC1_BRAJU (Q42611), 
SODC1_DEBHA (O42724), SODC1_MESCR (P93258), SODC1_ORYSI (A2XGP6), 
SODC1_ORYSJ (Q0DRV6), SODC1_SALT4 (E8XDJ8), SODC1_SALTY (P0CW86), 
SODC1_SOLLC (P14830), SODC2_AQUAE (O66602), SODC2_ARATH (O78310), 
SODC2_BRAJU (Q42612), SODC2_MAIZE (P11428), SODC2_MESCR (O49044), 
SODC2_OLEEU (Q8L5E0), SODC2_ORYSJ (P28757), SODC2_SOLLC (Q43779), 
SODC3_ARATH (Q9FK60), SODC4_MAIZE (P23345), SODC5_DICDI (Q54G70), 
SODC5_MAIZE (P23346), SODC6_DICDI (Q54TW8), SODCP_MEDSA (O65198), 
SODCP_ORYSJ (P93407), SODCP_PEA   (P11964), SODCP_PETHY (P10792), 
SODCP_PINSY (P24707), SODCP_POPTM (P36214), SODCP_SOLCS (O04997), 
SODCP_SOLLC (P14831), SODCP_SPIOL (P07505), SODCP_VITVI (O65199), 
SODCP_ZANAE (O65175), SODC_ACTPL  (P24702), SODC_ANACO  (Q9SQL5), 
SODC_ASPFL  (Q8X1S6), SODC_ASPFU  (Q9Y8D9), SODC_ASPNC  (A2QMY6), 
SODC_ASPNG  (P85978), SODC_ASPOR  (Q877B5), SODC_BOMMO  (P82205), 
SODC_BOSMU  (Q52RN5), SODC_BOTFU  (Q70Q35), SODC_BOVIN  (P00442), 
SODC_BRAOC  (P09678), SODC_BRUAB  (P15453), SODC_BRUME  (P66826), 
SODC_BRUPA  (P41962), SODC_BRUSU  (P66827), SODC_CAEBR  (A8XCP3), 
SODC_CAEEL  (P34697), SODC_CALJA  (Q8HXP8), SODC_CAMDR  (H6BDU4), 
SODC_CANAX  (O59924), SODC_CANGA  (Q6FWL5), SODC_CANLF  (Q8WNN6), 
SODC_CAPAN  (O22373), SODC_CARCR  (P80174), SODC_CARPA  (O65768), 
SODC_CAUVC  (P20379), SODC_CAVPO  (P33431), SODC_CERCA  (P28755), 
SODC_CEREL  (O46412), SODC_CHICK  (P80566), SODC_CHYAM  (Q07182), 
SODC_CLAP2  (Q96VL0), SODC_COLGL  (O94178), SODC_CORMI  (Q8J0N2), 
SODC_CORTN  (Q8J0N3), SODC_CRYGA  (Q9C0N4), SODC_CRYNH  (J9VLJ9), 
SODC_DANRE  (O73872), SODC_DROBS  (P54407), SODC_DROER  (Q9U4X4), 
SODC_DROMA  (P61853), SODC_DROME  (P61851), SODC_DROOR  (Q9U4X5), 
SODC_DROPS  (Q95086), SODC_DROSE  (P61854), SODC_DROSI  (P61852), 
SODC_DROTE  (Q9U4X2), SODC_DROVI  (P10791), SODC_DROWI  (P41973), 
SODC_DROYA  (Q9U4X3), SODC_ECO57  (P0AGD2), SODC_ECOLI  (P0AGD1), 
SODC_EMENI  (Q9HEY7), SODC_EREGS  (Q751L8), SODC_FRATH  (Q59448), 
SODC_HAEDU  (Q59452), SODC_HAEIF  (P25841), SODC_HAEPA  (P25842), 
SODC_HALRO  (P81926), SODC_HORSE  (P00443), SODC_HUMAN  (P00441), 
SODC_HUMLT  (P83684), SODC_HYLLA  (Q8HXQ3), SODC_IPOBA  (Q07796), 
SODC_KLULA  (Q6CPE2), SODC_LEGPH  (Q5ZT17), SODC_LEGPN  (P69049), 
SODC_MACFA  (Q8HXQ1), SODC_MACFU  (Q8HXQ2), SODC_MACMU  (Q8HXQ0), 
SODC_MOUSE  (P08228), SODC_MYCBO  (P0A609), SODC_MYCLE  (Q9CBI6), 
SODC_MYCPA  (Q9AGW2), SODC_MYCTO  (P9WGE8), SODC_MYCTU  (P9WGE9), 
SODC_NEIMA  (P57005), SODC_NEIMB  (Q59623), SODC_NEUCR  (P07509), 
SODC_NICPL  (P27082), SODC_NPVAC  (P24705), SODC_NPVOP  (O12933), 
SODC_ONCVO  (P24706), SODC_PANGI  (O22668), SODC_PANTR  (P60052), 
SODC_PASMU  (Q59689), SODC_PBCV1  (Q90023), SODC_PEA(Q02610), 
SODC_PHOLE  (P00446), SODC_PIG(P04178), SODC_PINSY  (P24669), 
SODC_PODAS  (Q711T9), SODC_POLSN  (Q6T3B0), SODC_PONPY  (Q8HXQ4), 
SODC_PRIGL  (P11418), SODC_RABIT  (P09212), SODC_RAT(P07632), 
SODC_SALTY  (O68901), SODC_SAPAP  (Q8HXP9), SODC_SCHMA  (Q01137), 
SODC_SCHPO  (P28758), SODC_SHEEP  (P09670), SODC_SOLCS  (O04996), 
SODC_SOYBN  (Q7M1R5), SODC_SPIOL  (P22233), SODC_XENTR  (Q0IIW3), 
SODC_XIPGL  (P03946), SODC_YARLI  (Q6C662), SODC_YEAST  (P00445), 
SODC_ZANAE  (O65174), SODC_ZINOF  (C0HK70), SODE_BRUPA  (P41963), 
SODE_CAEEL  (P34461), SODE_DIRIM  (P41974), SODE_DROME  (Q7JR71), 
SODE_HAECO  (P51547), SODE_HUMAN  (P08294), SODE_MOUSE  (O09164), 
SODE_ONCVO  (Q07449), SODE_RABIT  (P41975), SODE_RAT(Q08420), 
SODE_SCHMA  (P16026)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

CCS1_DEBHA  (Q6BK66), CCS_DICDI   (Q54F73), SODC2_DICDI (Q54RN1), 

SODC3_DICDI (Q54RQ1), SODC_ASPJA  (Q12548), SODC_DEIRA  (Q9RU48), 
SODC_HAECO  (Q27666), SODC_PAUKA  (O49073), YOJM_BACSU  (O31851)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 18 sequences 

SODC1_OLEEU (P80740), SODC2_DEBHN (P82902), SODC2_PICAB (P29428), 

SODCP_PICAB (P29427), SODCP_PINPS (P81082), SODC_AGGAC  (Q59081), 
SODC_DROMD  (Q95081), SODC_DROMI  (Q95079), SODC_DROOB  (Q95085), 
SODC_DROPB  (Q95087), SODC_DROPE  (Q95088), SODC_DROTO  (Q95095), 
SODC_HORVU  (P34936), SODC_LAMCR  (P81036), SODC_LITCT  (P23417), 
SODC_MANHA  (Q51853), SODC_PAROL  (P83129), SODC_STRHE  (P81163)
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

BURS_PERAM  (P84118), STT3A_ORYSJ (Q6F2Z1)


				
	

	

		PDB
[Detailed view]		
		
			195 PDB
			


			1AZV; 1B4L; 1B4T; 1BA9; 1BZO; 1CB4; 1CBJ; 1COB; 1DO5; 1DSW; 1E9O; 1E9P; 
			
				1E9Q; 1EQW; 1ESO; 1F18; 1F1A; 1F1D; 1F1G; 1FUN; 1HL4; 1HL5; 1IB5; 1IBB; 
				1IBD; 1IBF; 1IBH; 1JCV; 1JK9; 1KMG; 1L3N; 1MFM; 1N18; 1N19; 1OAJ; 1OAL; 
				1OEZ; 1OZT; 1OZU; 1P1V; 1PTZ; 1PU0; 1PZS; 1Q0E; 1RK7; 1SDA; 1SDY; 1SOS; 
				1SPD; 1SRD; 1SXA; 1SXB; 1SXC; 1SXN; 1SXS; 1SXZ; 1TO4; 1TO5; 1UXL; 1UXM; 
				1XSO; 1YAI; 1YAZ; 1YSO; 1Z9N; 1Z9P; 2AEO; 2AF2; 2APS; 2AQN; 2AQP; 2AQQ; 
				2AQR; 2AQS; 2AQT; 2C9S; 2C9U; 2C9V; 2GBT; 2JCW; 2JLP; 2LU5; 2NAM; 2NNX; 
				2R27; 2SOD; 2V0A; 2VR6; 2VR7; 2VR8; 2WKO; 2WYT; 2WYZ; 2WZ0; 2WZ5; 2WZ6; 
				2XJK; 2XJL; 2Z7U; 2Z7W; 2Z7Y; 2Z7Z; 2ZKW; 2ZKX; 2ZKY; 2ZOW; 3CQP; 3CQQ; 
				3ECU; 3ECV; 3ECW; 3GQF; 3GTT; 3GTV; 3GZO; 3GZP; 3GZQ; 3H2P; 3H2Q; 3HFF; 
				3HOG; 3HW7; 3K91; 3KBE; 3KBF; 3KH3; 3KH4; 3KM1; 3KM2; 3L9E; 3L9Y; 3LTV; 
				3MKG; 3PU7; 3QQD; 3RE0; 3S0P; 3SOD; 3T5W; 4A7G; 4A7Q; 4A7S; 4A7T; 4A7U; 
				4A7V; 4B3E; 4BCY; 4FF9; 4L05; 4MCM; 4MCN; 5IN2; 5K02; 5O3Y; 5O40; 5U9M; 
				5YTO; 5YTU; 5YUL; 6A9O; 6D52; 6DTK; 6FFK; 6FN8; 6FOL; 6FON; 6FP6; 6SPA; 
				6SPH; 6SPI; 6SPJ; 6SPK; 6VBS; 6VBT; 6Z3V; 6Z4G; 6Z4H; 6Z4I; 6Z4J; 6Z4K; 
				6Z4L; 6Z4M; 6Z4O; 7FB9; 7NXX; 7T8E; 7T8F; 7T8G; 7T8H; 7VZF; 7WWT; 7WWY; 
				7WX0; 7WX1; 8GSQ
			
			

			» more