PROSITE entry PS00365
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General information about the entry
| Entry name [info] | NIR_SIR |
| Accession [info] | PS00365 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00314 |
Name and characterization of the entry
| Description [info] | Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. |
| Pattern [info] |
[STVN]-G-C-x(3)-C-x(6)-[DE]-[LIVMF]-[GAT]-[LIVMF]. |
Numerical results [info]
| Total number of hits | 206 in 205 different sequences |
| Number of true positive hits | 205 in 204 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 8 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 99.51 % |
| Recall (true positives / (true positives + false negatives)) | 96.24 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 2 |
| Site [info] | iron_sulfur at position 3 |
| Site [info] | iron_sulfur/siroheme at position 5 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
204 sequences
ASRC_SALTI (P0A1Y3), ASRC_SALTY (P0A1Y2), CBIH_PRIMG (O87689), COBG_SINSX (P21637), CYSI1_KLEP3 (B5XV25), CYSI1_PECCP (C6DCZ7), CYSI2_KLEP3 (B5Y1B5), CYSI2_PECCP (C6DDH3), CYSI_ACIF2 (B7JAM6), CYSI_ACIF5 (B5EQW2), CYSI_ACTP2 (A3N3D8), CYSI_ACTP7 (B3GZ95), CYSI_ACTPJ (B0BT17), CYSI_ACTPL (Q8VSR0), CYSI_ACTSZ (A6VPZ1), CYSI_AERHH (A0KNL0), CYSI_AFIC5 (B6JCW3), CYSI_ALIF1 (Q5E840), CYSI_ALIFM (B5FGI9), CYSI_ALISL (B6ELM5), CYSI_ALTMD (B4RYS6), CYSI_ANOFW (B7GJU8), CYSI_BACLD (Q65L57), CYSI_BACP2 (A8FDY3), CYSI_BACSU (O32213), CYSI_BACVZ (A7Z8R5), CYSI_BAUCH (Q1LTP2), CYSI_BLOFL (Q7VQH1), CYSI_BLOPB (Q493N3), CYSI_BORPD (A9IT77), CYSI_BUCA5 (B8D9K5), CYSI_BUCAI (P57502), CYSI_BUCAP (P0C0B2), CYSI_BUCAT (B8D7V7), CYSI_CHRSD (Q1QU16), CYSI_CITK8 (A8ANX0), CYSI_COLP3 (Q47UW8), CYSI_CROS8 (A7MJ64), CYSI_DICC1 (C6CLS0), CYSI_ECO24 (A7ZQK6), CYSI_ECO27 (B7UHH5), CYSI_ECO45 (B7MKN0), CYSI_ECO55 (B7LEI2), CYSI_ECO57 (Q8X7U2), CYSI_ECO5E (B5Z3C6), CYSI_ECO7I (B7NTA0), CYSI_ECO81 (B7MYR1), CYSI_ECO8A (B7LXH6), CYSI_ECOBD (C5W865), CYSI_ECOBR (C6UCN7), CYSI_ECOBW (C4ZZR7), CYSI_ECOHS (A8A3P4), CYSI_ECOK1 (A1AEU9), CYSI_ECOL5 (Q0TEA3), CYSI_ECOL6 (Q8FEI8), CYSI_ECOLC (B1IU78), CYSI_ECOLI (P17846), CYSI_ECOLU (B7N6Z7), CYSI_ECOSE (B6I6F7), CYSI_ECOSM (B1LQ86), CYSI_ECOUT (Q1R7T5), CYSI_ENT38 (A4WDW0), CYSI_ERWT9 (B2VG06), CYSI_ESCF3 (B7LWN9), CYSI_GEOKA (Q5L041), CYSI_GEOTN (A4IMT6), CYSI_HALH5 (Q9KF75), CYSI_KLEP7 (A6TD48), CYSI_LEPBA (B0SF75), CYSI_LEPBP (B0SNL6), CYSI_LYSSC (B1HXC1), CYSI_MANSM (Q65T54), CYSI_METC4 (B7L0Y4), CYSI_METEA (C5APZ1), CYSI_METEP (A9W4X6), CYSI_METNO (B8IRY2), CYSI_METPB (B1Z7C5), CYSI_METRJ (B1LS97), CYSI_METS4 (B0U8Y9), CYSI_METSB (B8EKI5), CYSI_MUSP7 (C6CAW9), CYSI_MYXXD (Q1D9W9), CYSI_NEIM0 (A9LZ72), CYSI_NEIMA (Q9JUD9), CYSI_NEIMB (Q9JS33), CYSI_NEIMF (A1KU05), CYSI_NITEC (Q0AGU3), CYSI_NITEU (Q82W45), CYSI_NITHX (Q1QQC7), CYSI_NITOC (Q3JBJ1), CYSI_NITWN (Q3SV33), CYSI_OCEIH (Q8EQP0), CYSI_PECAS (Q6D1A2), CYSI_PHOLL (Q7N8L5), CYSI_PHOPR (Q6LM59), CYSI_PROMH (B4F234), CYSI_PSEA6 (Q15NK1), CYSI_PSYIN (A1T054), CYSI_SALA4 (B5F430), CYSI_SALAR (A9MF17), CYSI_SALCH (Q57KH8), CYSI_SALDC (B5FTU2), CYSI_SALEP (B5QW35), CYSI_SALG2 (B5RDS0), CYSI_SALHS (B4TFY4), CYSI_SALNS (B4T474), CYSI_SALPA (Q5PEH8), CYSI_SALPB (A9N2E5), CYSI_SALPC (C0PXC5), CYSI_SALPK (B5BEZ8), CYSI_SALSV (B4TTX8), CYSI_SALTI (Q8Z459), CYSI_SALTY (P17845), CYSI_SERP5 (A8G9X7), CYSI_SHEB2 (B8EE51), CYSI_SHEB5 (A3D829), CYSI_SHEB8 (A6WJT5), CYSI_SHEB9 (A9L2P8), CYSI_SHEDO (Q12QQ5), CYSI_SHEFN (Q07Y86), CYSI_SHEHH (B0TTE4), CYSI_SHELP (A3QAP0), CYSI_SHEON (Q8EB00), CYSI_SHEPA (A8H094), CYSI_SHEPC (A4Y9Z3), CYSI_SHEPW (B8CJV9), CYSI_SHESA (A0KTH5), CYSI_SHESH (A8FZY7), CYSI_SHESM (Q0HFL7), CYSI_SHESR (Q0HYB3), CYSI_SHESW (A1RGD7), CYSI_SHEWM (B1KE86), CYSI_SHIB3 (B2TZH1), CYSI_SHIBS (Q31XM5), CYSI_SHIDS (Q32CG4), CYSI_SHIF8 (Q0T1I7), CYSI_SHIFL (Q83QE0), CYSI_SHISS (Q3YY95), CYSI_SODGM (Q2NVN3), CYSI_STAEQ (Q5HKZ7), CYSI_STAES (Q8CMX5), CYSI_STAHJ (Q4L9F1), CYSI_STAS1 (Q49UL9), CYSI_THIRO (P52673), CYSI_TOLAT (C4L9J8), CYSI_VIBA3 (B7VI85), CYSI_VIBC1 (A7MSZ7), CYSI_VIBC3 (A5F3I5), CYSI_VIBCH (Q9KUX3), CYSI_VIBCM (C3LRB7), CYSI_VIBPA (Q87L91), CYSI_VIBVU (Q8DCK1), CYSI_VIBVY (Q7MHA6), CYSI_XANAC (Q8PHC8), CYSI_XANC5 (Q3BPY4), CYSI_XANC8 (Q4UY08), CYSI_XANCB (B0RPG6), CYSI_XANCP (Q8P608), CYSI_XANOM (Q2P0H2), CYSI_XANOP (B2SI05), CYSI_XANOR (Q8KQT8), CYSI_XYLF2 (B2IA31), CYSI_XYLFA (Q9PD81), CYSI_XYLFM (B0U6W0), CYSI_XYLFT (Q87DH0), CYSI_YERE8 (A1JJS3), CYSI_YERP3 (A7FLY9), CYSI_YERPA (Q1C3Z1), CYSI_YERPB (B2K566), CYSI_YERPE (Q8ZBN7), CYSI_YERPN (Q1CLS7), CYSI_YERPP (A4TPY6), CYSI_YERPS (Q66ED3), CYSI_YERPY (B1JK04), CYSI_ZYMMO (Q5NRM2), FSR_METJA (Q58280), MET5_YEAST (P47169), NASD_HALMT (I3R637), NIRB_ECOLI (P08201), NIRB_KLEOX (Q06458), NIR_ARATH (Q39161), NIR_BETPN (P38500), NIR_EMENI (P22944), NIR_MAIZE (P17847), NIR_NEUCR (P38681), NIR_ORYSJ (Q42997), NIR_PHOLA (Q51879), NIR_PINSY (Q43090), NIR_SPIOL (P05314), NIR_SYNE7 (P39661), SIR1_MYCPA (Q73YC1), SIR1_TOBAC (O82802), SIR2_MYCPA (Q73XV0), SIR_ARATH (Q9LZ66), SIR_DESVH (Q05805), SIR_MAIZE (O23813), SIR_MYCBO (Q7TYP6), SIR_MYCTO (P9WJ02), SIR_MYCTU (P9WJ03), SIR_PEA (Q75NZ0), SIR_SOYBN (Q9AWB2), SIR_SYNE7 (P30008), SIR_SYNY3 (P72854), Y551_METJA (Q57971)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
8 sequences
CYSI_ALKCK (Q5WKE7), CYSI_BREBN (C0Z9X2), CYSI_PAESJ (C6CXN6), CYSI_PSET1 (Q3IFM1), CYSI_SHEAM (A1S9I4), CYSI_STACT (B9DLM4), MET5_SCHPO (Q1K9C2), NASD_BACSU (P42435)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
NIR_LEPMC (P43504) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
ARGJ_DESPS (Q6AJL0) |
| PDB [Detailed view] |
25 PDB
1AOP; 1ZJ8; 1ZJ9; 2AKJ; 2AOP; 2GEP; 3AOP; 3GEO; 4AOP; 4G38; 4G39; 4GEP; 4HTR; 5AOP; 5GEP; 5H8V; 5H8Y; 5H92; 6C3M; 6C3X; 6C3Y; 6GEP; 7GEP; 7NP8; 8GEP » more |