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PROSITE entry PS00365


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General information about the entry

Entry name [info] NIR_SIR
Accession [info] PS00365
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00314

Name and characterization of the entry

Description [info] Nitrite and sulfite reductases iron-sulfur/siroheme-binding site.
Pattern [info] 
[STVN]-G-C-x(3)-C-x(6)-[DE]-[LIVMF]-[GAT]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 206 in 205 different sequences
Number of true positive hits 205 in 204 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 8
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.51 %
Recall (true positives / (true positives + false negatives)) 96.24 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur/siroheme at position 5
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 204 sequences 

ASRC_SALTI  (P0A1Y3), ASRC_SALTY  (P0A1Y2), CBIH_PRIMG  (O87689), 

COBG_SINSX  (P21637), CYSI1_KLEP3 (B5XV25), CYSI1_PECCP (C6DCZ7), 
CYSI2_KLEP3 (B5Y1B5), CYSI2_PECCP (C6DDH3), CYSI_ACIF2  (B7JAM6), 
CYSI_ACIF5  (B5EQW2), CYSI_ACTP2  (A3N3D8), CYSI_ACTP7  (B3GZ95), 
CYSI_ACTPJ  (B0BT17), CYSI_ACTPL  (Q8VSR0), CYSI_ACTSZ  (A6VPZ1), 
CYSI_AERHH  (A0KNL0), CYSI_AFIC5  (B6JCW3), CYSI_ALIF1  (Q5E840), 
CYSI_ALIFM  (B5FGI9), CYSI_ALISL  (B6ELM5), CYSI_ALTMD  (B4RYS6), 
CYSI_ANOFW  (B7GJU8), CYSI_BACLD  (Q65L57), CYSI_BACP2  (A8FDY3), 
CYSI_BACSU  (O32213), CYSI_BACVZ  (A7Z8R5), CYSI_BAUCH  (Q1LTP2), 
CYSI_BLOFL  (Q7VQH1), CYSI_BLOPB  (Q493N3), CYSI_BORPD  (A9IT77), 
CYSI_BUCA5  (B8D9K5), CYSI_BUCAI  (P57502), CYSI_BUCAP  (P0C0B2), 
CYSI_BUCAT  (B8D7V7), CYSI_CHRSD  (Q1QU16), CYSI_CITK8  (A8ANX0), 
CYSI_COLP3  (Q47UW8), CYSI_CROS8  (A7MJ64), CYSI_DICC1  (C6CLS0), 
CYSI_ECO24  (A7ZQK6), CYSI_ECO27  (B7UHH5), CYSI_ECO45  (B7MKN0), 
CYSI_ECO55  (B7LEI2), CYSI_ECO57  (Q8X7U2), CYSI_ECO5E  (B5Z3C6), 
CYSI_ECO7I  (B7NTA0), CYSI_ECO81  (B7MYR1), CYSI_ECO8A  (B7LXH6), 
CYSI_ECOBD  (C5W865), CYSI_ECOBR  (C6UCN7), CYSI_ECOBW  (C4ZZR7), 
CYSI_ECOHS  (A8A3P4), CYSI_ECOK1  (A1AEU9), CYSI_ECOL5  (Q0TEA3), 
CYSI_ECOL6  (Q8FEI8), CYSI_ECOLC  (B1IU78), CYSI_ECOLI  (P17846), 
CYSI_ECOLU  (B7N6Z7), CYSI_ECOSE  (B6I6F7), CYSI_ECOSM  (B1LQ86), 
CYSI_ECOUT  (Q1R7T5), CYSI_ENT38  (A4WDW0), CYSI_ERWT9  (B2VG06), 
CYSI_ESCF3  (B7LWN9), CYSI_GEOKA  (Q5L041), CYSI_GEOTN  (A4IMT6), 
CYSI_HALH5  (Q9KF75), CYSI_KLEP7  (A6TD48), CYSI_LEPBA  (B0SF75), 
CYSI_LEPBP  (B0SNL6), CYSI_LYSSC  (B1HXC1), CYSI_MANSM  (Q65T54), 
CYSI_METC4  (B7L0Y4), CYSI_METEA  (C5APZ1), CYSI_METEP  (A9W4X6), 
CYSI_METNO  (B8IRY2), CYSI_METPB  (B1Z7C5), CYSI_METRJ  (B1LS97), 
CYSI_METS4  (B0U8Y9), CYSI_METSB  (B8EKI5), CYSI_MUSP7  (C6CAW9), 
CYSI_MYXXD  (Q1D9W9), CYSI_NEIM0  (A9LZ72), CYSI_NEIMA  (Q9JUD9), 
CYSI_NEIMB  (Q9JS33), CYSI_NEIMF  (A1KU05), CYSI_NITEC  (Q0AGU3), 
CYSI_NITEU  (Q82W45), CYSI_NITHX  (Q1QQC7), CYSI_NITOC  (Q3JBJ1), 
CYSI_NITWN  (Q3SV33), CYSI_OCEIH  (Q8EQP0), CYSI_PECAS  (Q6D1A2), 
CYSI_PHOLL  (Q7N8L5), CYSI_PHOPR  (Q6LM59), CYSI_PROMH  (B4F234), 
CYSI_PSEA6  (Q15NK1), CYSI_PSYIN  (A1T054), CYSI_SALA4  (B5F430), 
CYSI_SALAR  (A9MF17), CYSI_SALCH  (Q57KH8), CYSI_SALDC  (B5FTU2), 
CYSI_SALEP  (B5QW35), CYSI_SALG2  (B5RDS0), CYSI_SALHS  (B4TFY4), 
CYSI_SALNS  (B4T474), CYSI_SALPA  (Q5PEH8), CYSI_SALPB  (A9N2E5), 
CYSI_SALPC  (C0PXC5), CYSI_SALPK  (B5BEZ8), CYSI_SALSV  (B4TTX8), 
CYSI_SALTI  (Q8Z459), CYSI_SALTY  (P17845), CYSI_SERP5  (A8G9X7), 
CYSI_SHEB2  (B8EE51), CYSI_SHEB5  (A3D829), CYSI_SHEB8  (A6WJT5), 
CYSI_SHEB9  (A9L2P8), CYSI_SHEDO  (Q12QQ5), CYSI_SHEFN  (Q07Y86), 
CYSI_SHEHH  (B0TTE4), CYSI_SHELP  (A3QAP0), CYSI_SHEON  (Q8EB00), 
CYSI_SHEPA  (A8H094), CYSI_SHEPC  (A4Y9Z3), CYSI_SHEPW  (B8CJV9), 
CYSI_SHESA  (A0KTH5), CYSI_SHESH  (A8FZY7), CYSI_SHESM  (Q0HFL7), 
CYSI_SHESR  (Q0HYB3), CYSI_SHESW  (A1RGD7), CYSI_SHEWM  (B1KE86), 
CYSI_SHIB3  (B2TZH1), CYSI_SHIBS  (Q31XM5), CYSI_SHIDS  (Q32CG4), 
CYSI_SHIF8  (Q0T1I7), CYSI_SHIFL  (Q83QE0), CYSI_SHISS  (Q3YY95), 
CYSI_SODGM  (Q2NVN3), CYSI_STAEQ  (Q5HKZ7), CYSI_STAES  (Q8CMX5), 
CYSI_STAHJ  (Q4L9F1), CYSI_STAS1  (Q49UL9), CYSI_THIRO  (P52673), 
CYSI_TOLAT  (C4L9J8), CYSI_VIBA3  (B7VI85), CYSI_VIBC1  (A7MSZ7), 
CYSI_VIBC3  (A5F3I5), CYSI_VIBCH  (Q9KUX3), CYSI_VIBCM  (C3LRB7), 
CYSI_VIBPA  (Q87L91), CYSI_VIBVU  (Q8DCK1), CYSI_VIBVY  (Q7MHA6), 
CYSI_XANAC  (Q8PHC8), CYSI_XANC8  (Q4UY08), CYSI_XANCB  (B0RPG6), 
CYSI_XANCP  (Q8P608), CYSI_XANE5  (Q3BPY4), CYSI_XANOM  (Q2P0H2), 
CYSI_XANOP  (B2SI05), CYSI_XANOR  (Q8KQT8), CYSI_XYLF2  (B2IA31), 
CYSI_XYLFA  (Q9PD81), CYSI_XYLFM  (B0U6W0), CYSI_XYLFT  (Q87DH0), 
CYSI_YERE8  (A1JJS3), CYSI_YERP3  (A7FLY9), CYSI_YERPA  (Q1C3Z1), 
CYSI_YERPB  (B2K566), CYSI_YERPE  (Q8ZBN7), CYSI_YERPN  (Q1CLS7), 
CYSI_YERPP  (A4TPY6), CYSI_YERPS  (Q66ED3), CYSI_YERPY  (B1JK04), 
CYSI_ZYMMO  (Q5NRM2), FSR_METJA   (Q58280), MET5_YEAST  (P47169), 
NASD_HALMT  (I3R637), NIRB_ECOLI  (P08201), NIRB_KLEOX  (Q06458), 
NIR_ARATH   (Q39161), NIR_BETPN   (P38500), NIR_EMENI   (P22944), 
NIR_MAIZE   (P17847), NIR_NEUCR   (P38681), NIR_ORYSJ   (Q42997), 
NIR_PHOLA   (Q51879), NIR_PINSY   (Q43090), NIR_SPIOL   (P05314), 
NIR_SYNE7   (P39661), SIR1_MYCPA  (Q73YC1), SIR1_TOBAC  (O82802), 
SIR2_MYCPA  (Q73XV0), SIR_ARATH   (Q9LZ66), SIR_MAIZE   (O23813), 
SIR_MYCBO   (Q7TYP6), SIR_MYCTO   (P9WJ02), SIR_MYCTU   (P9WJ03), 
SIR_NITV2   (Q05805), SIR_PEA (Q75NZ0), SIR_SOYBN   (Q9AWB2), 
SIR_SYNE7   (P30008), SIR_SYNY3   (P72854), Y551_METJA  (Q57971)
» more

UniProtKB/Swiss-Prot
False negative sequences		 8 sequences 

CYSI_BREBN  (C0Z9X2), CYSI_PAESJ  (C6CXN6), CYSI_PSET1  (Q3IFM1), 

CYSI_SHEAM  (A1S9I4), CYSI_SHOC1  (Q5WKE7), CYSI_STACT  (B9DLM4), 
MET5_SCHPO  (Q1K9C2), NASD_BACSU  (P42435)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

NIR_LEPMC   (P43504)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
ARGJ_DESPS  (Q6AJL0)


				
	

	

		PDB
[Detailed view]		
		
			25 PDB
			


			1AOP; 1ZJ8; 1ZJ9; 2AKJ; 2AOP; 2GEP; 3AOP; 3GEO; 4AOP; 4G38; 4G39; 4GEP; 
			
				4HTR; 5AOP; 5GEP; 5H8V; 5H8Y; 5H92; 6C3M; 6C3X; 6C3Y; 6GEP; 7GEP; 7NP8; 
				8GEP
			
			

			» more