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Entry: PS00365

General information about the entry

Entry name [info] NIR_SIR
Accession [info] PS00365
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00314

Name and characterization of the entry

Description [info] Nitrite and sulfite reductases iron-sulfur/siroheme-binding site.
Pattern [info]
[STVN]-G-C-x(3)-C-x(6)-[DE]-[LIVMF]-[GAT]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 206 in 205 different sequences
Number of true positive hits 205 in 204 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 8
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.51 %
Recall (true positives / (true positives + false negatives)) 96.24 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur/siroheme at position 5
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
204 sequences

ASRC_SALTI  (P0A1Y3    ), ASRC_SALTY  (P0A1Y2    ), CBIH_BACME  (O87689    ), 
COBG_SINSX  (P21637    ), CYSI1_KLEP3 (B5XV25    ), CYSI1_PECCP (C6DCZ7    ), 
CYSI2_KLEP3 (B5Y1B5    ), CYSI2_PECCP (C6DDH3    ), CYSI_ACIF2  (B7JAM6    ), 
CYSI_ACIF5  (B5EQW2    ), CYSI_ACTP2  (A3N3D8    ), CYSI_ACTP7  (B3GZ95    ), 
CYSI_ACTPJ  (B0BT17    ), CYSI_ACTPL  (Q8VSR0    ), CYSI_ACTSZ  (A6VPZ1    ), 
CYSI_AERHH  (A0KNL0    ), CYSI_ALIF1  (Q5E840    ), CYSI_ALIFM  (B5FGI9    ), 
CYSI_ALISL  (B6ELM5    ), CYSI_ALTMD  (B4RYS6    ), CYSI_ANOFW  (B7GJU8    ), 
CYSI_BACHD  (Q9KF75    ), CYSI_BACLD  (Q65L57    ), CYSI_BACP2  (A8FDY3    ), 
CYSI_BACSU  (O32213    ), CYSI_BACVZ  (A7Z8R5    ), CYSI_BAUCH  (Q1LTP2    ), 
CYSI_BLOFL  (Q7VQH1    ), CYSI_BLOPB  (Q493N3    ), CYSI_BORPD  (A9IT77    ), 
CYSI_BUCA5  (B8D9K5    ), CYSI_BUCAI  (P57502    ), CYSI_BUCAP  (P0C0B2    ), 
CYSI_BUCAT  (B8D7V7    ), CYSI_CHRSD  (Q1QU16    ), CYSI_CITK8  (A8ANX0    ), 
CYSI_COLP3  (Q47UW8    ), CYSI_CROS8  (A7MJ64    ), CYSI_DICC1  (C6CLS0    ), 
CYSI_DICP7  (C6CAW9    ), CYSI_ECO24  (A7ZQK6    ), CYSI_ECO27  (B7UHH5    ), 
CYSI_ECO45  (B7MKN0    ), CYSI_ECO55  (B7LEI2    ), CYSI_ECO57  (Q8X7U2    ), 
CYSI_ECO5E  (B5Z3C6    ), CYSI_ECO7I  (B7NTA0    ), CYSI_ECO81  (B7MYR1    ), 
CYSI_ECO8A  (B7LXH6    ), CYSI_ECOBD  (C5W865    ), CYSI_ECOBR  (C6UCN7    ), 
CYSI_ECOBW  (C4ZZR7    ), CYSI_ECOHS  (A8A3P4    ), CYSI_ECOK1  (A1AEU9    ), 
CYSI_ECOL5  (Q0TEA3    ), CYSI_ECOL6  (Q8FEI8    ), CYSI_ECOLC  (B1IU78    ), 
CYSI_ECOLI  (P17846    ), CYSI_ECOLU  (B7N6Z7    ), CYSI_ECOSE  (B6I6F7    ), 
CYSI_ECOSM  (B1LQ86    ), CYSI_ECOUT  (Q1R7T5    ), CYSI_ENT38  (A4WDW0    ), 
CYSI_ERWT9  (B2VG06    ), CYSI_ESCF3  (B7LWN9    ), CYSI_GEOKA  (Q5L041    ), 
CYSI_GEOTN  (A4IMT6    ), CYSI_KLEP7  (A6TD48    ), CYSI_LEPBA  (B0SF75    ), 
CYSI_LEPBP  (B0SNL6    ), CYSI_LYSSC  (B1HXC1    ), CYSI_MANSM  (Q65T54    ), 
CYSI_METC4  (B7L0Y4    ), CYSI_METEA  (C5APZ1    ), CYSI_METEP  (A9W4X6    ), 
CYSI_METNO  (B8IRY2    ), CYSI_METPB  (B1Z7C5    ), CYSI_METRJ  (B1LS97    ), 
CYSI_METS4  (B0U8Y9    ), CYSI_METSB  (B8EKI5    ), CYSI_MYXXD  (Q1D9W9    ), 
CYSI_NEIM0  (A9LZ72    ), CYSI_NEIMA  (Q9JUD9    ), CYSI_NEIMB  (Q9JS33    ), 
CYSI_NEIMF  (A1KU05    ), CYSI_NITEC  (Q0AGU3    ), CYSI_NITEU  (Q82W45    ), 
CYSI_NITHX  (Q1QQC7    ), CYSI_NITOC  (Q3JBJ1    ), CYSI_NITWN  (Q3SV33    ), 
CYSI_OCEIH  (Q8EQP0    ), CYSI_OLICO  (B6JCW3    ), CYSI_PECAS  (Q6D1A2    ), 
CYSI_PHOLL  (Q7N8L5    ), CYSI_PHOPR  (Q6LM59    ), CYSI_PROMH  (B4F234    ), 
CYSI_PSEA6  (Q15NK1    ), CYSI_PSYIN  (A1T054    ), CYSI_SALA4  (B5F430    ), 
CYSI_SALAR  (A9MF17    ), CYSI_SALCH  (Q57KH8    ), CYSI_SALDC  (B5FTU2    ), 
CYSI_SALEP  (B5QW35    ), CYSI_SALG2  (B5RDS0    ), CYSI_SALHS  (B4TFY4    ), 
CYSI_SALNS  (B4T474    ), CYSI_SALPA  (Q5PEH8    ), CYSI_SALPB  (A9N2E5    ), 
CYSI_SALPC  (C0PXC5    ), CYSI_SALPK  (B5BEZ8    ), CYSI_SALSV  (B4TTX8    ), 
CYSI_SALTI  (Q8Z459    ), CYSI_SALTY  (P17845    ), CYSI_SERP5  (A8G9X7    ), 
CYSI_SHEB2  (B8EE51    ), CYSI_SHEB5  (A3D829    ), CYSI_SHEB8  (A6WJT5    ), 
CYSI_SHEB9  (A9L2P8    ), CYSI_SHEDO  (Q12QQ5    ), CYSI_SHEFN  (Q07Y86    ), 
CYSI_SHEHH  (B0TTE4    ), CYSI_SHELP  (A3QAP0    ), CYSI_SHEON  (Q8EB00    ), 
CYSI_SHEPA  (A8H094    ), CYSI_SHEPC  (A4Y9Z3    ), CYSI_SHEPW  (B8CJV9    ), 
CYSI_SHESA  (A0KTH5    ), CYSI_SHESH  (A8FZY7    ), CYSI_SHESM  (Q0HFL7    ), 
CYSI_SHESR  (Q0HYB3    ), CYSI_SHESW  (A1RGD7    ), CYSI_SHEWM  (B1KE86    ), 
CYSI_SHIB3  (B2TZH1    ), CYSI_SHIBS  (Q31XM5    ), CYSI_SHIDS  (Q32CG4    ), 
CYSI_SHIF8  (Q0T1I7    ), CYSI_SHIFL  (Q83QE0    ), CYSI_SHISS  (Q3YY95    ), 
CYSI_SODGM  (Q2NVN3    ), CYSI_STAEQ  (Q5HKZ7    ), CYSI_STAES  (Q8CMX5    ), 
CYSI_STAHJ  (Q4L9F1    ), CYSI_STAS1  (Q49UL9    ), CYSI_THIRO  (P52673    ), 
CYSI_TOLAT  (C4L9J8    ), CYSI_VIBC3  (A5F3I5    ), CYSI_VIBCB  (A7MSZ7    ), 
CYSI_VIBCH  (Q9KUX3    ), CYSI_VIBCM  (C3LRB7    ), CYSI_VIBPA  (Q87L91    ), 
CYSI_VIBTL  (B7VI85    ), CYSI_VIBVU  (Q8DCK1    ), CYSI_VIBVY  (Q7MHA6    ), 
CYSI_XANAC  (Q8PHC8    ), CYSI_XANC5  (Q3BPY4    ), CYSI_XANC8  (Q4UY08    ), 
CYSI_XANCB  (B0RPG6    ), CYSI_XANCP  (Q8P608    ), CYSI_XANOM  (Q2P0H2    ), 
CYSI_XANOP  (B2SI05    ), CYSI_XANOR  (Q8KQT8    ), CYSI_XYLF2  (B2IA31    ), 
CYSI_XYLFA  (Q9PD81    ), CYSI_XYLFM  (B0U6W0    ), CYSI_XYLFT  (Q87DH0    ), 
CYSI_YERE8  (A1JJS3    ), CYSI_YERP3  (A7FLY9    ), CYSI_YERPA  (Q1C3Z1    ), 
CYSI_YERPB  (B2K566    ), CYSI_YERPE  (Q8ZBN7    ), CYSI_YERPN  (Q1CLS7    ), 
CYSI_YERPP  (A4TPY6    ), CYSI_YERPS  (Q66ED3    ), CYSI_YERPY  (B1JK04    ), 
CYSI_ZYMMO  (Q5NRM2    ), FSR_METJA   (Q58280    ), MET5_YEAST  (P47169    ), 
NASD_HALMT  (I3R637    ), NIRB_ECOLI  (P08201    ), NIRB_KLEOX  (Q06458    ), 
NIR_ARATH   (Q39161    ), NIR_BETPN   (P38500    ), NIR_EMENI   (P22944    ), 
NIR_MAIZE   (P17847    ), NIR_NEUCR   (P38681    ), NIR_ORYSJ   (Q42997    ), 
NIR_PHOLA   (Q51879    ), NIR_PINSY   (Q43090    ), NIR_SPIOL   (P05314    ), 
NIR_SYNE7   (P39661    ), SIR1_MYCPA  (Q73YC1    ), SIR1_TOBAC  (O82802    ), 
SIR2_MYCPA  (Q73XV0    ), SIR_ARATH   (Q9LZ66    ), SIR_DESVH   (Q05805    ), 
SIR_MAIZE   (O23813    ), SIR_MYCBO   (Q7TYP6    ), SIR_MYCTO   (P9WJ02    ), 
SIR_MYCTU   (P9WJ03    ), SIR_PEA     (Q75NZ0    ), SIR_SOYBN   (Q9AWB2    ), 
SIR_SYNE7   (P30008    ), SIR_SYNY3   (P72854    ), Y551_METJA  (Q57971    )
» more

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

CYSI_BACSK  (Q5WKE7    ), CYSI_BREBN  (C0Z9X2    ), CYSI_PAESJ  (C6CXN6    ), 
CYSI_PSEHT  (Q3IFM1    ), CYSI_SHEAM  (A1S9I4    ), CYSI_STACT  (B9DLM4    ), 
MET5_SCHPO  (Q1K9C2    ), NASD_BACSU  (P42435    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

NIR_LEPMC   (P43504    )

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ARGJ_DESPS  (Q6AJL0    )

		
PDB
[Detailed view]
24 PDB

1AOP; 1ZJ8; 1ZJ9; 2AKJ; 2AOP; 2GEP; 3AOP; 3GEO; 4AOP; 4G38; 4G39; 4GEP; 4HTR; 5AOP; 5GEP; 5H8V; 5H8Y; 5H92; 6C3M; 6C3X; 6C3Y; 6GEP; 7GEP; 8GEP
» more

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