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Entry: PS00369

General information about the entry

Entry name [info] PTS_HPR_HIS
Accession [info] PS00369
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-DEC-2001 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00318

Name and characterization of the entry

Description [info] PTS HPR domain histidine phosphorylation site signature.
Pattern [info]
G-[LIVM]-H-[STAV]-R-[PAS]-[GSTA]-[STAMVN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 82 in 81 different sequences
Number of true positive hits 72 in 71 different sequences
Number of 'unknown' hits 0
Number of false positive hits 10 in 10 different sequences
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 87.80 %
Recall (true positives / (true positives + false negatives)) 90.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] phosphorylation at position 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
71 sequences

DHAM_ECOLI  (P37349    ), DHAM_KLEOK  (A0A0H3H456), DHAM_PANAM  (D4GL26    ), 
PTFAH_ECO57 (P69812    ), PTFAH_ECOLI (P69811    ), PTFAH_HAEIN (P44715    ), 
PTFAH_SALTI (Q8Z591    ), PTFAH_SALTY (P17127    ), PTFAX_RHOCA (P23388    ), 
PTFAX_XANCP (P45597    ), PTFX2_ECOLI (P32670    ), PTHP_BACHD  (Q9K8D2    ), 
PTHP_BACME  (O69250    ), PTHP_BACSU  (P08877    ), PTHP_BACTI  (Q9F166    ), 
PTHP_BORBU  (O51507    ), PTHP_BUCAI  (Q9WXI5    ), PTHP_BUCAP  (Q8KA49    ), 
PTHP_BUCBP  (Q89B03    ), PTHP_CUPNH  (P23537    ), PTHP_ECO57  (P0AA06    ), 
PTHP_ECOL6  (P0AA05    ), PTHP_ECOLI  (P0AA04    ), PTHP_ENTFA  (P07515    ), 
PTHP_GEOSE  (P42013    ), PTHP_HAEIN  (P43921    ), PTHP_HALVD  (D4GYE3    ), 
PTHP_KLEPN  (P16481    ), PTHP_LACCA  (Q9KJV3    ), PTHP_LACLA  (Q9CJ83    ), 
PTHP_LACLC  (Q9ZAD9    ), PTHP_LACSK  (O07125    ), PTHP_LISIN  (P0A439    ), 
PTHP_LISMO  (P0A438    ), PTHP_LYSSH  (Q84F84    ), PTHP_MYCCT  (P45611    ), 
PTHP_MYCGE  (P47287    ), PTHP_MYCPN  (P75061    ), PTHP_NEIMA  (P65876    ), 
PTHP_NEIMB  (P65877    ), PTHP_PSEAE  (Q9HVV2    ), PTHP_PSEPU  (Q9Z426    ), 
PTHP_SALTI  (P0AA08    ), PTHP_SALTY  (P0AA07    ), PTHP_SHIFL  (P0AA09    ), 
PTHP_STAAC  (Q5HH02    ), PTHP_STAAM  (P0A0E1    ), PTHP_STAAN  (P99143    ), 
PTHP_STAAR  (Q6GI02    ), PTHP_STAAS  (Q6GAD1    ), PTHP_STAAU  (P0A0E3    ), 
PTHP_STAAW  (P0A0E2    ), PTHP_STACA  (P23534    ), PTHP_STAXY  (Q9EYQ9    ), 
PTHP_STRCO  (O50515    ), PTHP_STREI  (Q9WXK8    ), PTHP_STRMU  (P45596    ), 
PTHP_STRSA  (P24365    ), PTHP_STRSL  (P24366    ), PTHP_TREPA  (O83598    ), 
PTHP_VIBCH  (Q9KTD6    ), PTHP_XYLFA  (Q9PDH6    ), PTHP_XYLFT  (Q87DQ0    ), 
PTSO_ECO57  (P0A9N2    ), PTSO_ECOL6  (P0A9N1    ), PTSO_ECOLI  (P0A9N0    ), 
PTSO_KLEOX  (P51185    ), PTSO_PROMH  (Q9ZA86    ), PTSO_SHEVD  (Q9S0K8    ), 
PTSO_SHIFL  (P0A9N3    ), PTSO_VIBCH  (Q9KP46    )
» more

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

DHAM_PROSM  (P0DN88    ), PTFX1_ECOLI (P77439    ), PTFX_ECO57  (Q8XBQ8    ), 
PTFX_ECOL6  (Q8FFD8    ), PTFX_SHIFL  (Q83QP3    ), PTHP_CHLMU  (Q9PK56    ), 
PTHP_CHLPN  (Q9Z9E4    ), PTHP_CHLTR  (O84341    )
» more

UniProtKB/Swiss-Prot
False positive sequences
10 sequences

ATP25_NEOFI (A1DIN7    ), BIOB_HERAR  (A4G1F1    ), BIOB_JANMA  (A6SU66    ), 
IRS4_YEAS7  (A6ZZY3    ), IRS4_YEAST  (P36115    ), NPD_DEIRA   (Q9RYD4    ), 
NPD_THET2   (Q72IV5    ), RME6_DROME  (Q9VZ08    ), Y503_VIBVU  (Q8DET1    ), 
Y538_VIBPA  (Q87S86    )
» more

PDB
[Detailed view]
45 PDB

1FU0; 1GGR; 1HDN; 1J6T; 1JEM; 1KA5; 1KKL; 1KKM; 1OPD; 1PCH; 1PFH; 1POH; 1PTF; 1QFR; 1QR5; 1RZR; 1SPH; 1VRC; 1Y4Y; 1Y50; 1Y51; 2FEP; 2HID; 2HPR; 2JEL; 2LRK; 2LRL; 2NZU; 2NZV; 2OEN; 2XDF; 3EZA; 3EZB; 3EZE; 3OQM; 3OQN; 3OQO; 4XWJ; 5T17; 5T1N; 5T1O; 5YA0; 5YA1; 5YA2; 6KCR
» more

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