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PROSITE entry PS00380


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General information about the entry

Entry name [info] RHODANESE_1
Accession [info] PS00380
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-JUL-1998 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00322

Name and characterization of the entry

Description [info] Rhodanese signature 1.
Pattern [info] 
[FY]-x(3)-H-[LIV]-P-G-A-x(2)-[LIVF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 31 in 31 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 31
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.94 %
Recall (true positives / (true positives + false negatives)) 50.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 31 sequences 

GLPE_EDWI9  (C5B970), GLPE_PECAS  (Q6CZL2), GLPE_PECCP  (C6DH73), 

STR2_ARATH  (Q24JL3), THT2_MYCBO  (Q7TWT6), THT2_MYCLE  (P46700), 
THT2_MYCTO  (P9WHF6), THT2_MYCTU  (P9WHF7), THT3_MYCTO  (P9WHF4), 
THT3_MYCTU  (P9WHF5), THTM_ECO57  (P58388), THTM_ECOLI  (P31142), 
THTM_HUMAN  (P25325), THTM_MOUSE  (Q99J99), THTM_RAT(P97532), 
THTR_AZOVI  (P52197), THTR_BOVIN  (P00586), THTR_CHICK  (P25324), 
THTR_CORGL  (P71121), THTR_CRIGR  (P46635), THTR_DEIRA  (Q9RXT9), 
THTR_HUMAN  (Q16762), THTR_METTH  (O26719), THTR_MOUSE  (P52196), 
THTR_PSEAE  (Q9HUK9), THTR_RAT(P24329), THTR_SACER  (P16385), 
THTR_SYNE7  (P27477), TTUD_THET2  (Q72JV2), Y324_MYCTU  (O08446), 
YNJE_ECOLI  (P78067)
» more

UniProtKB/Swiss-Prot
False negative sequences		 31 sequences 

ACR21_ORYSJ (Q336V5), ACR22_ORYSJ (Q10SX6), CAS_ARATH   (Q9FN48), 

CDC25_ARATH (Q8GY31), HARC1_ARATH (Q8RUD6), MOCS3_ARATH (Q9ZNW0), 
RHODA_ALLVD (D3RPB9), STR10_ARATH (Q9SR92), STR11_ARATH (Q0WWT7), 
STR12_ARATH (Q93WI0), STR14_ARATH (Q94A65), STR15_ARATH (Q38853), 
STR16_ARATH (Q39129), STR17_ARATH (F4IPI4), STR18_ARATH (Q9FKW8), 
STR1_ARATH  (O64530), STR4A_ARATH (Q56XR7), STR4_ARATH  (Q9M158), 
STR6_ARATH  (Q94AC1), STR7_ARATH  (Q1JPN0), STR8_ARATH  (F4I933), 
STR9_ARATH  (O48529), THTM_PSEAE  (Q9I452), THTR1_MYCBO (P59989), 
THTR2_MYCBO (Q7TX80), THTR_HALVD  (D4GYM0), THTR_MYCLE  (Q50036), 
THTR_MYCS2  (A0R4C9), THTR_MYCTO  (P9WHF8), THTR_MYCTU  (P9WHF9), 
YTWF_BACSU  (O32072)
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

ACCH2_ARATH (Q9C5K7), ZN703_DANRE (Q90ZE2)


				
	

	

		PDB
[Detailed view]		
		
			22 PDB
			


			1BOH; 1BOI; 1DP2; 1E0C; 1H4K; 1H4M; 1ORB; 1RHD; 1RHS; 1URH; 2ORA; 2WLR; 
			
				2WLX; 3HZU; 3IPO; 3IPP; 3OLH; 4JGT; 5WQJ; 5WQK; 8AGF; 8BGQ
			
			

			» more