PROSITE entry PS00380
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General information about the entry
Entry name [info] | RHODANESE_1 |
Accession [info] | PS00380 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1990 CREATED;
01-JUL-1998 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00322 |
Name and characterization of the entry
Description [info] | Rhodanese signature 1. |
Pattern [info] |
[FY]-x(3)-H-[LIV]-P-G-A-x(2)-[LIVF]. |
Numerical results [info]
Total number of hits | 33 in 33 different sequences |
Number of true positive hits | 31 in 31 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 31 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 93.94 % |
Recall (true positives / (true positives + false negatives)) | 50.00 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
31 sequences
GLPE_EDWI9 (C5B970), GLPE_PECAS (Q6CZL2), GLPE_PECCP (C6DH73), STR2_ARATH (Q24JL3), THT2_MYCBO (Q7TWT6), THT2_MYCLE (P46700), THT2_MYCTO (P9WHF6), THT2_MYCTU (P9WHF7), THT3_MYCTO (P9WHF4), THT3_MYCTU (P9WHF5), THTM_ECO57 (P58388), THTM_ECOLI (P31142), THTM_HUMAN (P25325), THTM_MOUSE (Q99J99), THTM_RAT(P97532), THTR_AZOVI (P52197), THTR_BOVIN (P00586), THTR_CHICK (P25324), THTR_CORGL (P71121), THTR_CRIGR (P46635), THTR_DEIRA (Q9RXT9), THTR_HUMAN (Q16762), THTR_METTH (O26719), THTR_MOUSE (P52196), THTR_PSEAE (Q9HUK9), THTR_RAT(P24329), THTR_SACER (P16385), THTR_SYNE7 (P27477), TTUD_THET2 (Q72JV2), Y324_MYCTU (O08446), YNJE_ECOLI (P78067)» more
|
UniProtKB/Swiss-Prot False negative sequences |
31 sequences
ACR21_ORYSJ (Q336V5), ACR22_ORYSJ (Q10SX6), CAS_ARATH (Q9FN48), CDC25_ARATH (Q8GY31), HARC1_ARATH (Q8RUD6), MOCS3_ARATH (Q9ZNW0), RHODA_ALLVD (D3RPB9), STR10_ARATH (Q9SR92), STR11_ARATH (Q0WWT7), STR12_ARATH (Q93WI0), STR14_ARATH (Q94A65), STR15_ARATH (Q38853), STR16_ARATH (Q39129), STR17_ARATH (F4IPI4), STR18_ARATH (Q9FKW8), STR1_ARATH (O64530), STR4A_ARATH (Q56XR7), STR4_ARATH (Q9M158), STR6_ARATH (Q94AC1), STR7_ARATH (Q1JPN0), STR8_ARATH (F4I933), STR9_ARATH (O48529), THTM_PSEAE (Q9I452), THTR1_MYCBO (P59989), THTR2_MYCBO (Q7TX80), THTR_HALVD (D4GYM0), THTR_MYCLE (Q50036), THTR_MYCS2 (A0R4C9), THTR_MYCTO (P9WHF8), THTR_MYCTU (P9WHF9), YTWF_BACSU (O32072)» more |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
ACCH2_ARATH (Q9C5K7), ZN703_DANRE (Q90ZE2) |
PDB [Detailed view] |
22 PDB
1BOH; 1BOI; 1DP2; 1E0C; 1H4K; 1H4M; 1ORB; 1RHD; 1RHS; 1URH; 2ORA; 2WLR; 2WLX; 3HZU; 3IPO; 3IPP; 3OLH; 4JGT; 5WQJ; 5WQK; 8AGF; 8BGQ » more |