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PROSITE entry PS00388


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General information about the entry

Entry name [info] PROTEASOME_ALPHA_1
Accession [info] PS00388
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-JUL-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00326

Name and characterization of the entry

Description [info] Proteasome alpha-type subunits signature.
Pattern [info]
[FYNAGS]-x(4)-[STNLV]-x-[FYW]-S-[PDS]-x(0,1)-G-[RKHDS]-x(2)-Q-[LIVA]-
[DENR]-[YH]-[GSAD]-x(2)-[GSAG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 174 in 174 different sequences
Number of true positive hits 174 in 174 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 64
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.11 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
174 sequences

PSA1A_ARATH (P34066), PSA1B_ARATH (O23712), PSA1_BOVIN  (Q3T0X5), 
PSA1_CAEEL  (O44156), PSA1_CHICK  (O42265), PSA1_DICDI  (Q27562), 
PSA1_DROME  (P12881), PSA1_HALMA  (Q5V2X8), PSA1_HALVD  (Q9V2V6), 
PSA1_HUMAN  (P25786), PSA1_MACFA  (Q4R3H2), PSA1_MOUSE  (Q9R1P4), 
PSA1_ORYSJ  (P52428), PSA1_PONAB  (Q5REN2), PSA1_RAT(P18420), 
PSA1_SCHPO  (O94517), PSA1_TRYBB  (Q9GU37), PSA1_TRYBR  (O96788), 
PSA1_TRYCR  (P92188), PSA1_YEAST  (P21243), PSA2A_ARATH (O23708), 
PSA2B_ARATH (Q8L4A7), PSA2_BOVIN  (Q3T0Y5), PSA2_CAEEL  (Q27488), 
PSA2_CARAU  (O73672), PSA2_DICDI  (Q54DM7), PSA2_DROME  (P40301), 
PSA2_HALMA  (Q5V1D4), PSA2_HALVD  (Q9V2V5), PSA2_HUMAN  (P25787), 
PSA2_MOUSE  (P49722), PSA2_NEUCR  (Q8X077), PSA2_ORYSI  (A2YVR7), 
PSA2_ORYSJ  (Q10KF0), PSA2_RAT(P17220), PSA2_SCHPO  (O94579), 
PSA2_TRYBB  (Q9U793), PSA2_XENLA  (P24495), PSA2_YEAST  (P23639), 
PSA3_ACACA  (P90513), PSA3_ARATH  (O23715), PSA3_BOVIN  (Q58DU5), 
PSA3_CAEEL  (Q09583), PSA3_DICDI  (Q27563), PSA3_DROME  (Q9V5C6), 
PSA3_HUMAN  (P25788), PSA3_MOUSE  (O70435), PSA3_ORYSJ  (Q9LSU0), 
PSA3_RAT(P18422), PSA3_SCHPO  (Q09682), PSA3_SPIOL  (O24362), 
PSA3_YEAST  (P23638), PSA4A_ARATH (O81148), PSA4A_ORYSI (A2Y9X7), 
PSA4A_ORYSJ (P0DKK3), PSA4B_ARATH (F4JJE5), PSA4B_ORYSI (P0C8Y9), 
PSA4B_ORYSJ (Q5VRG3), PSA4C_ORYSJ (P0DKK4), PSA4L_DROME (Q9VA12), 
PSA4_BOVIN  (Q3ZCK9), PSA4_CAEEL  (Q9N599), PSA4_DICDI  (P34119), 
PSA4_DROME  (P18053), PSA4_HUMAN  (P25789), PSA4_MACFA  (Q4R932), 
PSA4_MOUSE  (Q9R1P0), PSA4_PETHY  (O82530), PSA4_RAT(P21670), 
PSA4_SCHPO  (Q10329), PSA4_SPIOL  (P52427), PSA4_YEAST  (P40303), 
PSA5A_ARATH (O81149), PSA5B_ARATH (Q42134), PSA5_BOVIN  (Q5E987), 
PSA5_CAEEL  (Q95008), PSA5_DICDI  (Q55G04), PSA5_DROME  (Q95083), 
PSA5_ENCCU  (Q8SRU3), PSA5_ENTH1  (Q94561), PSA5_HUMAN  (P28066), 
PSA5_MOUSE  (Q9Z2U1), PSA5_ORYSJ  (Q9LSU1), PSA5_RAT(P34064), 
PSA5_SCHPO  (Q9UT97), PSA5_SOYBN  (Q9M4T8), PSA5_TRYBB  (Q9XZG5), 
PSA5_YEAST  (P32379), PSA6A_ARATH (O81146), PSA6B_ARATH (O81147), 
PSA6_BOVIN  (Q2YDE4), PSA6_CAEEL  (O17586), PSA6_DROME  (Q9XZJ4), 
PSA6_HUMAN  (P60900), PSA6_MOUSE  (Q9QUM9), PSA6_ORYSJ  (Q9LSU3), 
PSA6_RAT(P60901), PSA6_SCHPO  (O14250), PSA6_SOYBN  (O48551), 
PSA6_TOBAC  (Q9XG77), PSA6_YEAST  (P40302), PSA71_DROME (P22769), 
PSA71_DROVI (O16811), PSA72_DROME (Q24178), PSA73_DROME (Q27575), 
PSA73_DROVI (O16812), PSA7A_ARATH (P30186), PSA7A_ORYSI (A2YXU2), 
PSA7A_ORYSJ (Q6YT00), PSA7A_XENLA (Q9PVY6), PSA7B_ARATH (O24616), 
PSA7B_ORYSI (A2Z3I9), PSA7B_ORYSJ (Q0J006), PSA7B_XENLA (Q9PVQ1), 
PSA7L_MACFA (Q4R7D9), PSA7_BOVIN  (Q3ZBG0), PSA7_CAEEL  (Q95005), 
PSA7_CARAU  (Q9PTW9), PSA7_CHICK  (O13268), PSA7_CICAR  (Q9SXU1), 
PSA7_DICDI  (P34120), PSA7_HUMAN  (O14818), PSA7_MOUSE  (Q9Z2U0), 
PSA7_PONAB  (Q5RDH8), PSA7_RAT(P48004), PSA7_SCHPO  (O59770), 
PSA7_SOLLC  (O24030), PSA7_TRYBB  (Q9NDA2), PSA7_YEAST  (P21242), 
PSA_AERPE   (Q9YC01), PSA_ARCFU   (O29760), PSA_HALS3   (B0R2T2), 
PSA_HALSA   (P57697), PSA_HALWD   (Q18K08), PSA_METAC   (Q8TPX5), 
PSA_METB6   (A7I9C7), PSA_METBF   (Q469M6), PSA_METJA   (Q60177), 
PSA_METKA   (Q8TYB7), PSA_METM5   (A4FZT6), PSA_METM6   (A9A846), 
PSA_METM7   (A6VIP0), PSA_METMA   (Q8PTU1), PSA_METMJ   (A3CW55), 
PSA_METMP   (Q6M0L9), PSA_METPE   (B8GEZ3), PSA_METS3   (A5UJS2), 
PSA_METS5   (A4YCU9), PSA_METTE   (Q59565), PSA_METTH   (O26782), 
PSA_METVS   (A6URN9), PSA_NATPD   (Q3IPJ1), PSA_PICTO   (Q6L0W3), 
PSA_PYRAB   (Q9V122), PSA_PYRAE   (Q8ZVM1), PSA_PYRFU   (Q8U0L6), 
PSA_PYRHO   (O59219), PSA_SACS2   (Q9UXC6), PSA_SULAC   (Q4JB24), 
PSA_SULIA   (C3N5R0), PSA_SULIK   (C4KHD9), PSA_SULIL   (C3MQ43), 
PSA_SULIM   (C3MVG1), PSA_SULIN   (C3NHC6), PSA_SULIY   (C3NEC6), 
PSA_SULTO   (Q975G5), PSA_THEAC   (P25156), PSA_THEGJ   (C5A2C2), 
PSA_THEK1   (O24733), PSA_THEKO   (Q5JIU9), PSA_THEON   (B6YSH9), 
PSA_THEVO   (Q97BZ8), PSMA8_HUMAN (Q8TAA3), PSMA8_MOUSE (Q9CWH6)
» more

UniProtKB/Swiss-Prot
False negative sequences
64 sequences

PSA1_RHOER  (Q53080), PSA2_RHOER  (Q53084), PSA3_ENCCU  (Q8SRU7), 
PSA6_DICDI  (Q54XM7), PSA6_ENCCU  (Q8SQS5), PSA7_ENCCU  (Q8SQP9), 
PSA_ACIC1   (A0LU51), PSA_ACIFD   (C7LYP8), PSA_ACTMD   (C6WID9), 
PSA_ARTS2   (A0JWY7), PSA_CATAD   (C7PVV3), PSA_FRAAA   (Q0RLT6), 
PSA_FRACC   (Q2J9Q4), PSA_FRASN   (A8LH53), PSA_GEOOG   (D2S6E3), 
PSA_GORB4   (D0LDT2), PSA_JONDD   (C7R404), PSA_KINRD   (A6W971), 
PSA_KRIFD   (D2Q4H5), PSA_MYCA1   (A0QFB6), PSA_MYCA9   (B1MAI3), 
PSA_MYCBO   (Q7TZ14), PSA_MYCBP   (A1KKF2), PSA_MYCBT   (C1AQ25), 
PSA_MYCGI   (A4TB55), PSA_MYCLB   (B8ZRF4), PSA_MYCLE   (Q9S375), 
PSA_MYCMM   (B2HFV5), PSA_MYCPA   (Q73YW9), PSA_MYCS2   (A0QZ46), 
PSA_MYCSJ   (A3Q192), PSA_MYCSK   (A1UHS6), PSA_MYCSS   (Q1B798), 
PSA_MYCTA   (A5U4D5), PSA_MYCTF   (A5WP83), PSA_MYCTK   (C6DPV2), 
PSA_MYCTO   (P9WHU0), PSA_MYCTU   (P9WHU1), PSA_MYCUA   (A0PQT2), 
PSA_MYCVP   (A1TAP3), PSA_NAKMY   (C8XAQ3), PSA_NOCFA   (Q5YUX3), 
PSA_NOCSJ   (A1SK14), PSA_PAEAT   (A1R6Q8), PSA_PSECP   (B8H8L7), 
PSA_RENSM   (A9WSI0), PSA_RHOE4   (C0ZZU6), PSA_RHOJR   (Q0SIG0), 
PSA_RHOOB   (C1ASP6), PSA_SACEN   (A4FBY2), PSA_SACVD   (C7MWV6), 
PSA_SALAI   (A8M2A4), PSA_SALTO   (A4X745), PSA_SANKS   (D1BHT8), 
PSA_STANL   (D3Q556), PSA_STRAW   (Q828I7), PSA_STRCO   (Q7AKQ6), 
PSA_STRGG   (B1W307), PSA_STRRD   (D2ATV0), PSA_STRSW   (C9Z4D1), 
PSA_THECD   (D1A2T0), PSA_THEFY   (Q47NZ5), PSA_THESM   (C6A459), 
PSA_XYLCX   (D1BS27)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PSMA_HALDO  (P84799)

		
PDB
[Detailed view]
467 PDB

1FNT; 1G0U; 1G65; 1IRU; 1J2P; 1JD2; 1PMA; 1RYP; 1YA7; 1YAR; 1YAU; 1Z7Q; 2F16; 2FAK; 2GPL; 2KU1; 2KU2; 2Z5C; 2ZCY; 3BDM; 3C91; 3C92; 3D29; 3DY3; 3DY4; 3E47; 3GPJ; 3GPT; 3GPW; 3H4P; 3HYE; 3IPM; 3JCO; 3JCP; 3JRM; 3JSE; 3JTL; 3MG0; 3MG4; 3MG6; 3MG7; 3MG8; 3NZJ; 3NZW; 3NZX; 3OEU; 3OEV; 3OKJ; 3SDI; 3SDK; 3SHJ; 3TDD; 3UN4; 3UN8; 3UNB; 3UNE; 3UNF; 3UNH; 3WXR; 4CR2; 4CR3; 4CR4; 4EU2; 4FZC; 4FZG; 4G4S; 4GK7; 4HNP; 4HRC; 4HRD; 4INR; 4INT; 4INU; 4J70; 4JSQ; 4JSU; 4JT0; 4LQI; 4LTC; 4NNN; 4NNW; 4NO1; 4NO6; 4NO8; 4NO9; 4Q1S; 4QBY; 4QLQ; 4QLS; 4QLT; 4QLU; 4QLV; 4QUX; 4QUY; 4QV0; 4QV1; 4QV3; 4QV4; 4QV5; 4QV6; 4QV7; 4QV8; 4QV9; 4QVL; 4QVM; 4QVN; 4QVP; 4QVQ; 4QVV; 4QVW; 4QVY; 4QW0; 4QW1; 4QW3; 4QW4; 4QW5; 4QW6; 4QW7; 4QWF; 4QWG; 4QWI; 4QWJ; 4QWK; 4QWL; 4QWR; 4QWS; 4QWU; 4QWX; 4QXJ; 4QZ0; 4QZ1; 4QZ2; 4QZ3; 4QZ4; 4QZ5; 4QZ6; 4QZ7; 4QZW; 4QZX; 4QZZ; 4R00; 4R02; 4R17; 4R18; 4R3O; 4R67; 4RUR; 4V7O; 4X6Z; 4Y69; 4Y6A; 4Y6V; 4Y6Z; 4Y70; 4Y74; 4Y75; 4Y77; 4Y78; 4Y7W; 4Y7X; 4Y7Y; 4Y80; 4Y81; 4Y82; 4Y84; 4Y8G; 4Y8H; 4Y8I; 4Y8J; 4Y8K; 4Y8L; 4Y8M; 4Y8N; 4Y8O; 4Y8P; 4Y8Q; 4Y8R; 4Y8S; 4Y8T; 4Y8U; 4Y9Y; 4Y9Z; 4YA0; 4YA1; 4YA2; 4YA3; 4YA4; 4YA5; 4YA7; 4YA9; 4Z1L; 5A0Q; 5A5B; 5AHJ; 5BOU; 5BXL; 5BXN; 5CGF; 5CGG; 5CGH; 5CGI; 5CZ4; 5CZ5; 5CZ6; 5CZ7; 5CZ8; 5CZ9; 5CZA; 5D0S; 5D0T; 5D0V; 5D0W; 5D0X; 5D0Z; 5DKI; 5DKJ; 5DSV; 5FG7; 5FG9; 5FGA; 5FGD; 5FGE; 5FGF; 5FGG; 5FGH; 5FGI; 5FHS; 5GJQ; 5GJR; 5JHR; 5JHS; 5L4G; 5L52; 5L54; 5L55; 5L5A; 5L5B; 5L5D; 5L5E; 5L5F; 5L5H; 5L5I; 5L5J; 5L5O; 5L5P; 5L5Q; 5L5R; 5L5S; 5L5T; 5L5U; 5L5V; 5L5W; 5L5X; 5L5Y; 5L5Z; 5L60; 5L61; 5L62; 5L63; 5L64; 5L65; 5L66; 5L67; 5L68; 5L69; 5L6A; 5L6B; 5L6C; 5LAI; 5LAJ; 5LE5; 5LEX; 5LEY; 5LEZ; 5LF0; 5LF1; 5LF3; 5LF4; 5LF6; 5LF7; 5LN3; 5LTT; 5M2B; 5M32; 5MP9; 5MPA; 5MPB; 5MPC; 5NIF; 5T0C; 5T0G; 5T0H; 5T0I; 5T0J; 5VFO; 5VFP; 5VFQ; 5VFR; 5VFS; 5VFT; 5VFU; 5WVI; 5WVK; 6AVO; 6BDF; 6E5B; 6EF0; 6EF1; 6EF2; 6EF3; 6EPC; 6EPD; 6EPE; 6EPF; 6FVT; 6FVU; 6FVV; 6FVW; 6FVX; 6FVY; 6G7F; 6G8M; 6G8N; 6GOP; 6H39; 6HE5; 6HE8; 6HE9; 6HEA; 6HEC; 6HED; 6HTB; 6HTC; 6HTD; 6HTP; 6HTR; 6HUB; 6HUC; 6HUQ; 6HUU; 6HUV; 6HV3; 6HV4; 6HV5; 6HV7; 6HVA; 6HVR; 6HVS; 6HVT; 6HVU; 6HVV; 6HVW; 6HVX; 6HVY; 6HW0; 6HW3; 6HW4; 6HW5; 6HW6; 6HW7; 6HW8; 6HW9; 6HWA; 6HWB; 6HWC; 6HWD; 6HWE; 6HWF; 6J2C; 6J2N; 6J2Q; 6J2X; 6J30; 6KWY; 6MSB; 6MSD; 6MSE; 6MSG; 6MSH; 6MSJ; 6MSK; 6R70; 6REY; 6RGQ; 6TU3; 6UTF; 6UTH; 6UTI; 6WJD; 6WJN; 6XMJ; 6Z46; 6ZOU; 6ZP6; 6ZP8; 7AWE; 7B12; 7DR6; 7DR7; 7DRW; 7E55; 7LS5; 7LS6; 7LSX; 7LXV; 7NAN; 7NAO; 7NAP; 7NAQ; 7NHT; 7O2L; 7PG9; 7QO3; 7QO5; 7QVE; 7QXN; 7QXP; 7QXU; 7QXW; 7QXX; 7QY7; 7QYA; 7QYB; 7TEJ; 7TEO; 7V5G; 7V5M; 7W37; 7W38; 7W39; 7W3A; 7W3B; 7W3C; 7W3F; 7W3G; 7W3H; 7W3I; 7W3J; 7W3K; 7W3M; 8AZK; 8BW1; 8BZL; 8CVR; 8CVS; 8CVT; 8CXB; 8F66; 8F6A; 8F7K; 8FZ5; 8FZ6; 8OHZ; 8OI1; 8OLR; 8QYJ; 8QYL; 8QYM; 8QYN; 8QYO; 8QYS; 8QZ9; 8T08; 8T0M; 8U6Y; 8U7U; 8UD9
» more