Home  |  Contact
Due to work on this service, it may not be fully operational on Wednesday March 20 between 1.30 pm and 2.30 pm CEST. Apologies for the incovenience.
Entry: PS00418

General information about the entry

Entry name [info] POTEX_CARLAVIRUS_COAT
Accession [info] PS00418
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE;
13-FEB-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00346

Name and characterization of the entry

Description [info] Potexviruses and carlaviruses coat protein signature.
Pattern [info] 
[RK]-[FYW]-A-[GAP]-F-D-x-F-x(2)-[LV]-x(3)-[GASTY]-[GASTV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_02 which contains 559'228 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 29 sequences 

CAPSD_ASPVP (Q64966    ), CAPSD_BOTVX (Q6YNQ5    ), CAPSD_CLBVS (Q91QZ1    ), 

CAPSD_CMVSI (Q00467    ), CAPSD_CVB   (P37991    ), CAPSD_CYMV  (P16486    ), 
CAPSD_FXMV  (P22172    ), CAPSD_HELVS (Q00556    ), CAPSD_ICRSV (Q9QEE7    ), 
CAPSD_LSV   (P27335    ), CAPSD_LVX   (P27334    ), CAPSD_NMV   (P15100    ), 
CAPSD_P1AMV (Q07506    ), CAPSD_PAMV  (P37993    ), CAPSD_PMV   (P16596    ), 
CAPSD_POPMV (Q02106    ), CAPSD_PVMG  (Q01669    ), CAPSD_PVMR  (P17529    ), 
CAPSD_PVSP  (P16653    ), CAPSD_PVX   (P07699    ), CAPSD_PVXCP (P62406    ), 
CAPSD_PVXHB (Q07626    ), CAPSD_PVXU3 (P31798    ), CAPSD_PVXX3 (P17782    ), 
CAPSD_PVXXC (P10468    ), CAPSD_SHVX  (Q04572    ), CAPSD_SMYEA (P28899    ), 
CAPSD_WCMVM (P09502    ), CAPSD_WCMVO (P15406    )
» more

PDB
[Detailed view]		 1 PDB

4DOX

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission