We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE entry PS00437
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PURL: https://purl.expasy.org/prosite/signature/PS00437
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CATALASE_1 |
| Accession [info] | PS00437 |
| Entry type [info] | PATTERN |
| Date [info] |
01-MAY-1991 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00395 |
Name and characterization of the entry
| Description [info] | Catalase proximal heme-ligand signature. |
| Pattern [info] |
R-[LIVMFSTAN]-F-[GASTNP]-Y-x-D-[AST]-[QEH]. |
Numerical results [info]
| Total number of hits | 149 in 149 different sequences |
| Number of true positive hits | 148 in 148 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 7 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 99.33 % |
| Recall (true positives / (true positives + false negatives)) | 95.48 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | heme at position 5 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
148 sequences
BCA_STRVP (P33569), CAT1_NEUCR (Q9C168), CAT1_PENJA (P81138), CATA1_ARATH (Q96528), CATA1_CAEEL (Q27487), CATA1_CUCPE (P48350), CATA1_GOSHI (P17598), CATA1_HORVU (P55307), CATA1_MAIZE (P18122), CATA1_NICPL (P49315), CATA1_ORYSI (P0C549), CATA1_ORYSJ (Q0E4K1), CATA1_RICCO (Q01297), CATA1_SOLLC (P30264), CATA1_SOLTU (P49284), CATA1_SOYBN (P29756), CATA1_TOBAC (P49319), CATA1_WHEAT (Q43206), CATA2_ARATH (P25819), CATA2_CAEEL (O61235), CATA2_CUCPE (P48351), CATA2_GOSHI (P30567), CATA2_HORVU (P55308), CATA2_MAIZE (P12365), CATA2_NICPL (P49316), CATA2_ORYSI (A2YH64), CATA2_ORYSJ (Q0D9C4), CATA2_RICCO (P49318), CATA2_SOLLC (Q9XHH3), CATA2_SOLTU (P55312), CATA2_WHEAT (P55313), CATA3_ARATH (Q42547), CATA3_CUCPE (P48352), CATA3_MAIZE (P18123), CATA3_NICPL (P49317), CATA3_ORYSI (B8AME2), CATA3_ORYSJ (Q10S82), CATA3_SOYBN (O48560), CATA4_SOYBN (O48561), CATA_ALIF1 (O68146), CATA_ASCSU (P90682), CATA_ASPFU (P78574), CATA_AVIMR (Q9AXH0), CATA_BACFR (P45737), CATA_BACSU (P26901), CATA_BORBR (P0A324), CATA_BORPA (P0A325), CATA_BORPE (P0A323), CATA_BOVIN (P00432), CATA_BRUAB (P0A327), CATA_BRUME (P0A326), CATA_BRUSU (Q8FWU0), CATA_CALJA (Q2I6W4), CATA_CAMJE (Q59296), CATA_CANAL (O13289), CATA_CANBO (Q96VB8), CATA_CANLF (O97492), CATA_CANTR (P07820), CATA_CAPAN (Q9M5L6), CATA_CAVPO (Q64405), CATA_DANRE (Q9PT92), CATA_DEIRA (Q59337), CATA_DICDI (O77229), CATA_DROME (P17336), CATA_EMENI (P55305), CATA_GLARU (Q9PWF7), CATA_HAEIN (P44390), CATA_HELAN (P45739), CATA_HELPJ (Q9ZKX5), CATA_HELPY (P77872), CATA_HUMAN (P04040), CATA_IPOBA (P07145), CATA_LATSK (P30265), CATA_LISIN (Q926X0), CATA_LISMO (Q8Y3P9), CATA_LISSE (P24168), CATA_METBF (O93662), CATA_MICLU (P29422), CATA_MOUSE (P24270), CATA_NEIGO (Q59602), CATA_NITV9 (Q9ZN99), CATA_ONCVE (Q27710), CATA_PEA(P25890), CATA_PICAN (P30263), CATA_PIG(O62839), CATA_PONAB (Q5RF10), CATA_PROMI (P42321), CATA_PSEAE (O52762), CATA_PSEPU (Q59714), CATA_RAT(P04762), CATA_RHIME (P95631), CATA_SCHPO (P55306), CATA_SECCE (P55310), CATA_SOLAP (O24339), CATA_SOLME (P55311), CATA_STAA3 (Q2FH99), CATA_STAA8 (Q2FYU7), CATA_STAAB (Q2YXT2), CATA_STAAC (Q5HG86), CATA_STAAM (Q99UE2), CATA_STAAN (Q7A5T2), CATA_STAAR (Q6GH72), CATA_STAAS (Q6G9M4), CATA_STAAU (Q9L4S1), CATA_STAAW (Q8NWV5), CATA_STAEP (Q2PUJ9), CATA_STAEQ (Q5HPK8), CATA_STAES (Q8CPD0), CATA_STAHJ (Q4L643), CATA_STAS1 (Q49XC1), CATA_STAWA (Q9KW19), CATA_STAXY (Q9EV50), CATA_STRCO (Q9Z598), CATA_TOXGO (Q9XZD5), CATA_VIBCH (Q9KRQ1), CATA_VIBPA (Q87JE8), CATA_VIBVU (Q8D452), CATA_VIBVY (Q7MFM6), CATA_VIGRR (P32290), CATA_YEAST (P15202), CATB_ASPFU (Q92405), CATB_ASPOR (Q877A8), CATB_DICDI (Q55DH8), CATB_EMENI (P78619), CATB_PSEAE (Q59635), CATB_PSESY (P46206), CATB_STAAU (Q9L4S2), CATB_STAXY (Q66V81), CATE_ALKPO (P30266), CATE_BACSU (P42234), CATE_ECOLI (P21179), CATE_MYCAV (P50979), CATE_PSEAE (Q9I1W8), CATE_PSEPU (P95539), CATE_RHIME (Q9X576), CATR_ASPNG (P55303), CATT_YEAS7 (A6ZV70), CATT_YEAST (P06115), CATX_BACSU (P94377), CNSD_PENEN (A0A0A2JW88), EASC_ARTBC (D4AK44), EASC_ARTOC (C5FTM9), EASC_ASPFU (Q4WZ63), EASC_CLAFS (A8C7R6), EASC_CLAP2 (M1WA44), EASC_CLAPU (Q6ZXC2), EASC_TRIVH (D4D445), IFGD_PENRF (W6QJS4)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
7 sequences
CAT3_NEUCR (Q9C169), CATA_BLUHO (Q8X1P0), CATA_BOTFU (P55304), CATA_PENJA (P11934), CATB_AJECA (Q9Y7C2), CRPE_MYCPA (Q73WB6), SRPA_SYNE7 (Q55025)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
CAT1_COMTR (P83657) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
ATR_ENCCU (Q8SSE7) |
| PDB [Detailed view] |
101 PDB
pdb_00001a4e; pdb_00001cf9; pdb_00001dgb; pdb_00001dgf; pdb_00001dgg; pdb_00001dgh; pdb_00001e93; pdb_00001f4j; pdb_00001gg9; pdb_00001gge; pdb_00001ggf; pdb_00001ggh; pdb_00001ggj; pdb_00001ggk; pdb_00001gwe; pdb_00001gwf; pdb_00001gwh; pdb_00001h6n; pdb_00001h7k; pdb_00001hbz; pdb_00001iph; pdb_00001m7s; pdb_00001m85; pdb_00001mqf; pdb_00001nm0; pdb_00001p7y; pdb_00001p7z; pdb_00001p80; pdb_00001p81; pdb_00001qf7; pdb_00001qqw; pdb_00001qwl; pdb_00001qwm; pdb_00001qws; pdb_00001sy7; pdb_00001tgu; pdb_00001th2; pdb_00001th3; pdb_00001th4; pdb_00001ye9; pdb_00002a9e; pdb_00002cag; pdb_00002cah; pdb_00002iqf; pdb_00002xq1; pdb_00003hb6; pdb_00003j7b; pdb_00003nwl; pdb_00003p9p; pdb_00003p9q; pdb_00003p9r; pdb_00003p9s; pdb_00003pq2; pdb_00003pq3; pdb_00003pq4; pdb_00003pq5; pdb_00003pq6; pdb_00003pq7; pdb_00003pq8; pdb_00003re8; pdb_00003rgp; pdb_00003rgs; pdb_00003vu3; pdb_00004bfl; pdb_00004blc; pdb_00004cab; pdb_00004e37; pdb_00004enp; pdb_00004enq; pdb_00004enr; pdb_00004ens; pdb_00004ent; pdb_00004enu; pdb_00004env; pdb_00004enw; pdb_00005bv2; pdb_00005gkn; pdb_00006by0; pdb_00006jnt; pdb_00006jnu; pdb_00006pm7; pdb_00006po0; pdb_00006ztv; pdb_00006ztw; pdb_00006ztx; pdb_00007cat; pdb_00007di8; pdb_00007p8w; pdb_00007vd9; pdb_00008cat; pdb_00008el9; pdb_00008hid; pdb_00008pvd; pdb_00008sgv; pdb_00008wzh; pdb_00008wzj; pdb_00008wzk; pdb_00008wzm; pdb_00009bdj; pdb_00009jdb; pdb_00009jdc » more |