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Entry: PS00441

General information about the entry

Entry name [info] CHALCONE_SYNTH
Accession [info] PS00441
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00403
Associated ProRule [info] PRU10023

Name and characterization of the entry

Description [info] Chalcone and stilbene synthases active site.
Pattern [info]
R-[LIVMFYS]-x-[LIVM]-x-[QHG]-x-G-C-[FYNA]-[GAPV]-G-[GAC]-[STAVK]-x-
[LIVMF]-[RAL].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 156 in 156 different sequences
Number of true positive hits 156 in 156 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 25
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.19 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
156 sequences

2PS_GERHY   (P48391    ), ACS2_RUTGR  (Q9FSC0    ), ACS3_RUTGR  (Q9FSC2    ), 
ACS4_RUTGR  (Q9FSC1    ), BBS_PHASS   (P53416    ), BCSA_BACSU  (P54157    ), 
CHS1_CAMSI  (P48386    ), CHS1_CASGL  (Q9ZRR8    ), CHS1_CICAR  (Q9SML4    ), 
CHS1_CITSI  (Q9XJ58    ), CHS1_DAUCA  (Q9ZS41    ), CHS1_GERHY  (P48390    ), 
CHS1_HORVU  (P26018    ), CHS1_IPOBA  (Q9MB33    ), CHS1_MAIZE  (P24824    ), 
CHS1_MEDSA  (P30073    ), CHS1_ORYSI  (A2ZEX7    ), CHS1_ORYSJ  (Q2R3A1    ), 
CHS1_PEA    (Q01286    ), CHS1_RUTGR  (Q9FSB9    ), CHS1_SECCE  (P53414    ), 
CHS1_SINAL  (P13416    ), CHS1_SOLLC  (P23418    ), CHS1_SORBI  (Q9XGX2    ), 
CHS1_SOYBN  (P24826    ), CHS1_TRISU  (P51083    ), CHS2_CAMSI  (P48387    ), 
CHS2_CITSI  (Q9XJ57    ), CHS2_DAUCA  (Q9ZS40    ), CHS2_HORVU  (Q96562    ), 
CHS2_IPOBA  (Q9MB41    ), CHS2_MAIZE  (P24825    ), CHS2_MEDSA  (P30074    ), 
CHS2_ORYSJ  (Q8H4L3    ), CHS2_PEA    (Q01287    ), CHS2_RUTGR  (Q9FSB8    ), 
CHS2_SECCE  (P53415    ), CHS2_SOLLC  (P23419    ), CHS2_SOLTU  (Q43188    ), 
CHS2_SORBI  (Q9SBL7    ), CHS2_SOYBN  (P17957    ), CHS2_TRISU  (P51084    ), 
CHS3_BROFI  (O23729    ), CHS3_CAMSI  (P48388    ), CHS3_GERHY  (P48392    ), 
CHS3_IPOBA  (Q9MB40    ), CHS3_MEDSA  (P51077    ), CHS3_PEA    (O23883    ), 
CHS3_RUTGR  (Q9FSB7    ), CHS3_SINAL  (P13417    ), CHS3_SORBI  (Q9SBL6    ), 
CHS3_SOYBN  (P19168    ), CHS3_TRISU  (P51085    ), CHS4_BROFI  (O23730    ), 
CHS4_IPOBA  (Q9MB39    ), CHS4_MEDSA  (P30075    ), CHS4_PEA    (O23882    ), 
CHS4_SORBI  (Q9SBL5    ), CHS4_TRISU  (P51086    ), CHS5_MEDSA  (P51078    ), 
CHS5_PEA    (O23884    ), CHS5_SORBI  (Q9SBL4    ), CHS5_SOYBN  (P48406    ), 
CHS5_TRISU  (P51087    ), CHS6_IPOBA  (Q9MB38    ), CHS6_MEDSA  (P51079    ), 
CHS6_PEA    (Q01288    ), CHS6_SORBI  (Q9SBL3    ), CHS6_SOYBN  (P30080    ), 
CHS6_TRISU  (P51088    ), CHS7_IPOBA  (Q9MB37    ), CHS7_MEDSA  (P51080    ), 
CHS7_PICMA  (Q9M5M0    ), CHS7_SORBI  (Q9XGX1    ), CHS7_SOYBN  (P30081    ), 
CHS8_BROFI  (O23731    ), CHS8_IPOBA  (Q9MB36    ), CHS8_MEDSA  (P30076    ), 
CHS9_DAUCA  (Q9SB26    ), CHS9_MEDSA  (P30077    ), CHSA_IPOCO  (P48393    ), 
CHSA_IPONI  (P48395    ), CHSA_IPOPL  (P48400    ), CHSA_IPOPU  (P48397    ), 
CHSA_IPOTF  (P48401    ), CHSA_IPOTR  (P48403    ), CHSA_PEA    (P51081    ), 
CHSA_PETHY  (P08894    ), CHSA_SOLTU  (Q41436    ), CHSB_IPOCO  (P48394    ), 
CHSB_IPONI  (P48396    ), CHSB_IPOPU  (P48398    ), CHSB_IPOTF  (P48402    ), 
CHSB_IPOTR  (P48404    ), CHSB_PEA    (P51082    ), CHSB_PETHY  (P22924    ), 
CHSB_SOLTU  (Q43163    ), CHSC_IPOPU  (P48399    ), CHSD_IPONI  (O22045    ), 
CHSD_PETHY  (P22925    ), CHSE_IPONI  (O22046    ), CHSE_IPOPU  (O22047    ), 
CHSF_PETHY  (P22926    ), CHSG_PETHY  (P22927    ), CHSJ_PETHY  (P22928    ), 
CHSY_ANTMA  (P06515    ), CHSY_ARAAL  (Q9SEP4    ), CHSY_ARATH  (P13114    ), 
CHSY_BETPN  (P51075    ), CHSY_CALCH  (P48385    ), CHSY_CARAN  (Q9SEP2    ), 
CHSY_CATRO  (Q9ZRS4    ), CHSY_CHRAE  (O04220    ), CHSY_DIACA  (P48389    ), 
CHSY_DIAMO  (Q9LKP7    ), CHSY_EQUAR  (Q9MBB1    ), CHSY_HYDMC  (O82144    ), 
CHSY_HYPAN  (Q9FUB7    ), CHSY_MATIN  (P17818    ), CHSY_ONOVI  (O22586    ), 
CHSY_PERAE  (Q9ZU06    ), CHSY_PERFR  (O04111    ), CHSY_PETCR  (P16107    ), 
CHSY_PHAVU  (P49440    ), CHSY_PINST  (O65872    ), CHSY_PINSY  (P30079    ), 
CHSY_PUEML  (P23569    ), CHSY_RAPSA  (O22652    ), CHSY_VIGUN  (P51089    ), 
CHSY_VITVI  (P51090    ), CHS_CANSA   (Q8RVK9    ), DPS1_PINST  (P48407    ), 
DPS2_PINST  (P48408    ), DPSS_PINSY  (Q02323    ), OLIS_CANSA  (B1Q2B6    ), 
PKS1_RUBID  (Q9AU11    ), PKS2_RUBID  (Q9AU10    ), PKS3_RUBID  (Q9AU09    ), 
PKS4_RUBID  (B0LDU5    ), PKS5_RUBID  (B0LDU6    ), PKSF3_CANSA (F1LKH5    ), 
PKSG1_CANSA (F1LKH6    ), PKSG2_CANSA (F1LKH7    ), PKSG4_CANSA (F1LKH8    ), 
PKSG5_CANSA (F1LKH9    ), THS1_ARAHY  (P20178    ), THS1_VITVI  (P28343    ), 
THS2_ARAHY  (P20077    ), THS2_VITVI  (P51070    ), THS3_ARAHY  (P51069    ), 
THS3_VITVI  (P51071    ), THS4_VITVI  (A5AEM3    ), THS5_VITVI  (A5C9M2    ), 
THS7_VITVI  (A2ICC6    ), VPS_HUMLU   (O80400    ), VPS_PSINU   (Q9SLX9    )
» more

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

BAS_RHEPA   (Q94FV7    ), CURS1_CURLO (C0SVZ6    ), CURS2_CURLO (C6L7V8    ), 
CURS3_CURLO (C6L7V9    ), CUS_ORYSJ   (Q8LIL0    ), DCS_CURLO   (C0SVZ5    ), 
DPGA_AMYBA  (Q939X3    ), DPGA_AMYOR  (G4V4T4    ), DPGA_STRTO  (Q8KLK5    ), 
OKS_ALOAR   (Q3L7F5    ), PCS_ALOAR   (Q58VP7    ), PHLD_PSEF5  (Q4K418    ), 
PHLD_PSEFL  (Q51725    ), PKS10_MYCTO (P9WPF4    ), PKS10_MYCTU (P9WPF5    ), 
PKS1_DICDI  (Q55E72    ), PKS37_DICDI (Q54FI3    ), PKS3_ALOAR  (C4MBZ5    ), 
PKS4_ALOAR  (C4NF90    ), PKS5_ALOAR  (C4NF91    ), PKSA_ARATH  (O23674    ), 
PKSB_ARATH  (Q8LDM2    ), RPPA_STRC0  (B0FYK7    ), RPPA_STRCO  (Q9FCA7    ), 
RPPA_STRGR  (Q54240    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

CHSY_FRAAN  (P51076    ), CHSY_MALDO  (P30078    )

		
PDB
[Detailed view]
24 PDB

1BI5; 1BQ6; 1CGK; 1CGZ; 1D6H; 1D6I; 1EE0; 1I86; 1I88; 1I89; 1I8B; 1JWX; 1QLV; 1U0U; 1U0V; 1U0W; 1XES; 1XET; 4YJY; 6DX9; 6DXA; 6DXB; 6DXD; 6GW3
» more

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View entry in raw text format (no links)
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