PROSITE entry PS00468

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General information about the entry

Entry name [info]	COBALAMIN_BINDING
Accession [info]	PS00468
Entry type [info]	PATTERN
Date [info]	01-MAY-1991 CREATED; 01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00428

Name and characterization of the entry

Description [info]	Eukaryotic cobalamin-binding proteins signature.
Pattern [info]	[SN]-[VT]-D-T-[GAME]-A-[LIVM]-[AV]-x-[LM]-A-[LIVMF]-[ST]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	11 in 11 different sequences
Number of true positive hits	11 in 11 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

11 sequences

IF_CANLF(Q5XWD5), IF_HUMAN(P27352), IF_MOUSE(P52787),

IF_RAT  (P17267), TCO1_HUMAN  (P20061), TCO1_PIG(P17630), 
TCO2_BOVIN  (Q9XSC9), TCO2_HUMAN  (P20062), TCO2_MOUSE  (O88968), 
TCO2_PONAB  (Q5REL7), TCO2_RAT(Q9R0D6)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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[Clustal format, plain text] [Fasta format]
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PDB
[Detailed view]

17 PDB

2BB5; 2BB6; 2BBC; 2PMV; 2V3N; 2V3P; 3KQ4; 4KKI; 4KKJ; 4ZRP; 4ZRQ; 7QBD; 7QBE; 7QBF; 7QBG; 8IXT; 8IXU
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