PROSITE entry PS00471
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00471
Direct ScanProsite submission
General information about the entry
| Entry name [info] | SMALL_CYTOKINES_CXC |
| Accession [info] | PS00471 |
| Entry type [info] | PATTERN |
| Date [info] |
01-MAY-1991 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00434 |
Name and characterization of the entry
| Description [info] | Small cytokines (intercrine/chemokine) C-x-C subfamily signature. |
| Pattern [info] |
C-x-C-[LIVMS]-x(4,6)-[LIVMFY]-x(2)-[RKSEQNA]-x-[LIVM]-x(2)-[LIVMA]-x(5)- [STAG]-x(2)-C-x(3)-[EQ]-[LIVM](2)-x(9,10)-C-[LV]-[DN]. |
Numerical results [info]
| Total number of hits | 65 in 65 different sequences |
| Number of true positive hits | 65 in 65 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 16 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.25 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 3 |
| Site [info] | disulfide at position 16 |
| Site [info] | disulfide at position 21 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
65 sequences
AMC2_PIG(P22952), AMC_RABIT (P82535), CX116_DANRE (B0R191),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
16 sequences
CX111_DANRE (A0A0R4INB9), CXL14_HUMAN (O95715), CXL14_MOUSE (Q9WUQ5),» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
GRO1_RABIT (P30782), PLF4_RABIT (P83470) |
| PDB [Detailed view] |
67 PDB
1F9P; 1F9Q; 1F9R; 1F9S; 1IKL; 1IKM; 1IL8; 1ILP; 1ILQ; 1LV9; 1MGS; 1MI2; » more |