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Entry: PS00471 |
Entry name [info] | SMALL_CYTOKINES_CXC |
Accession [info] | PS00471 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-APR-2006 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00434 |
Description [info] | Small cytokines (intercrine/chemokine) C-x-C subfamily signature. |
Pattern [info] |
C-x-C-[LIVMS]-x(4,6)-[LIVMFY]-x(2)-[RKSEQNA]-x-[LIVM]-x(2)-[LIVMA]-x(5)- [STAG]-x(2)-C-x(3)-[EQ]-[LIVM](2)-x(9,10)-C-[LV]-[DN]. |
Total number of hits | 65 in 65 different sequences |
Number of true positive hits | 65 in 65 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 16 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 80.25 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 3 |
Site [info] | disulfide at position 16 |
Site [info] | disulfide at position 21 |
Version [info] | 2 |
UniProtKB/Swiss-Prot True positive sequences |
65 sequences
AMC2_PIG (P22952 ), AMC_RABIT (P82535 ), CX116_DANRE (B0R191 ), CXCL2_HUMAN (P19875 ), CXCL2_MOUSE (P10889 ), CXCL2_RAT (P30348 ), CXCL3_HUMAN (P19876 ), CXCL3_MOUSE (Q6W5C0 ), CXCL3_RAT (Q10746 ), CXCL5_HUMAN (P42830 ), CXCL5_MOUSE (P50228 ), CXCL5_RAT (P97885 ), CXCL6_BOVIN (P80221 ), CXCL6_HORSE (Q8MIN2 ), CXCL6_HUMAN (P80162 ), CXCL7_HUMAN (P02775 ), CXCL7_PIG (P43030 ), CXCL9_BOVIN (A9QWP9 ), CXCL9_HUMAN (Q07325 ), CXCL9_MOUSE (P18340 ), CXL10_BOVIN (Q2KIQ8 ), CXL10_CANLF (Q5KSV9 ), CXL10_HUMAN (P02778 ), CXL10_MACMU (Q8MIZ1 ), CXL10_MACNE (Q865F5 ), CXL10_MOUSE (P17515 ), CXL10_RAT (P48973 ), CXL11_BOVIN (A9QWQ1 ), CXL11_HUMAN (O14625 ), CXL11_MOUSE (Q9JHH5 ), CXL13_HUMAN (O43927 ), CXL13_MOUSE (O55038 ), CXL15_MOUSE (Q9WVL7 ), GRO2_RABIT (P47854 ), GROA_BOVIN (O46676 ), GROA_CAVPO (O55235 ), GROA_CRIGR (P09340 ), GROA_HUMAN (P09341 ), GROA_MOUSE (P12850 ), GROA_RAT (P14095 ), GROA_SHEEP (O46678 ), GROB_BOVIN (O46677 ), GROG_BOVIN (O46675 ), IL8_BOVIN (P79255 ), IL8_CANLF (P41324 ), IL8_CAVPO (P49113 ), IL8_CERAT (P46653 ), IL8_CHICK (P08317 ), IL8_DASNO (Q102R3 ), IL8_FELCA (Q9XSX5 ), IL8_HORSE (O62812 ), IL8_HUMAN (P10145 ), IL8_MACMU (P67813 ), IL8_MACNE (P67814 ), IL8_PIG (P26894 ), IL8_RABIT (P19874 ), IL8_SHEEP (P36925 ), IL8_TURTR (Q7YRB5 ), PF4V_HUMAN (P10720 ), PLF4_BOVIN (P02777 ), PLF4_HUMAN (P02776 ), PLF4_MOUSE (Q9Z126 ), PLF4_PIG (P30034 ), PLF4_RAT (P06765 ), PLF4_SHEEP (P30035 )» more
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UniProtKB/Swiss-Prot False negative sequences |
16 sequences
CX111_DANRE (A0A0R4INB9), CXL14_HUMAN (O95715 ), CXL14_MOUSE (Q9WUQ5 ), CXL16_BOVIN (Q29RT9 ), CXL16_HUMAN (Q9H2A7 ), CXL16_MOUSE (Q8BSU2 ), CXL16_PIG (Q9GKE2 ), CXL16_RAT (Q6AXU5 ), CXL17_BOVIN (A4IFR0 ), CXL17_HUMAN (Q6UXB2 ), CXL17_MOUSE (Q5UW37 ), SDF1_FELCA (O62657 ), SDF1_HUMAN (P48061 ), SDF1_MOUSE (P40224 ), SDF1_XENLA (Q8UUJ9 ), SDF1_XENTR (Q5EBF6 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
GRO1_RABIT (P30782 ), PLF4_RABIT (P83470 ) |
PDB [Detailed view] |
49 PDB
1F9P; 1F9Q; 1F9R; 1F9S; 1IKL; 1IKM; 1IL8; 1ILP; 1ILQ; 1LV9; 1MGS; 1MI2; 1MSG; 1MSH; 1NAP; 1O7Y; 1O7Z; 1O80; 1PFM; 1PFN; 1PLF; 1QE6; 1QNK; 1RHP; 1RJT; 1ROD; 1TVX; 2IL8; 2MGS; 2R3Z; 3IL8; 3N52; 4HSV; 4R9W; 4R9Y; 4RAU; 4XDX; 5CBA; 5CBE; 5D14; 5IZB; 5L7M; 5OB5; 5WDZ; 6LFM; 6LFO; 6N2U; 6VGJ; 7JNY » more |