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Entry: PS00472 |
Entry name [info] | SMALL_CYTOKINES_CC |
Accession [info] | PS00472 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-APR-2006 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00434 |
Description [info] | Small cytokines (intercrine/chemokine) C-C subfamily signature. |
Pattern [info] |
C-C-[LIFYTRQ]-x(5,8)-[LIR]-x(4)-[LIVMFA]-x(2)-[FYWECI]-x(5,8)-C-x(3,4)- [SAG]-[LIVM](2)-[FL]-x(7,9)-C-[STAV]. |
Total number of hits | 90 in 90 different sequences |
Number of true positive hits | 90 in 90 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 14 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 86.54 % |
Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 2 |
Site [info] | disulfide at position 11 |
Site [info] | disulfide at position 17 |
Version [info] | 2 |
UniProtKB/Swiss-Prot True positive sequences |
90 sequences
CC4L_HUMAN (Q8NHW4 ), CCL11_BOVIN (Q9TTS6 ), CCL11_CAVPO (P80325 ), CCL11_HORSE (Q9TTQ4 ), CCL11_HUMAN (P51671 ), CCL11_MACMU (Q8MIT7 ), CCL11_MOUSE (P48298 ), CCL11_RAT (P97545 ), CCL12_MOUSE (Q62401 ), CCL13_CANLF (Q68Y88 ), CCL13_HUMAN (Q99616 ), CCL14_HUMAN (Q16627 ), CCL15_HUMAN (Q16663 ), CCL16_HUMAN (O15467 ), CCL17_CANLF (Q95N01 ), CCL17_FELCA (Q8I021 ), CCL17_HUMAN (Q92583 ), CCL17_MACMU (Q8HYP9 ), CCL18_HUMAN (P55774 ), CCL18_MACMU (Q8HYP8 ), CCL19_HUMAN (Q99731 ), CCL19_MOUSE (O70460 ), CCL1_HUMAN (P22362 ), CCL1_MOUSE (P10146 ), CCL20_BOVIN (Q8SQB1 ), CCL20_HUMAN (P78556 ), CCL20_MOUSE (O89093 ), CCL22_HUMAN (O00626 ), CCL22_MOUSE (O88430 ), CCL23_HUMAN (P55773 ), CCL23_MACMU (Q8HYP4 ), CCL24_MOUSE (Q9JKC0 ), CCL25_CANLF (Q68A93 ), CCL26_CANLF (Q64H35 ), CCL26_HUMAN (Q9Y258 ), CCL28_CANLF (Q68A91 ), CCL28_HUMAN (Q9NRJ3 ), CCL2_BOVIN (P28291 ), CCL2_CANLF (P52203 ), CCL2_CAVPO (Q08782 ), CCL2_HORSE (Q9TTQ3 ), CCL2_HUMAN (P13500 ), CCL2_MACFA (P61274 ), CCL2_MACMU (P61275 ), CCL2_MOUSE (P10148 ), CCL2_PIG (P42831 ), CCL2_PONAB (Q5RA36 ), CCL2_RABIT (P28292 ), CCL2_RAT (P14844 ), CCL3_BOVIN (Q8SQA6 ), CCL3_CANLF (Q68A92 ), CCL3_HUMAN (P10147 ), CCL3_MACMU (Q8HYQ3 ), CCL3_MOUSE (P10855 ), CCL3_PANTR (Q5I1Z0 ), CCL3_RAT (P50229 ), CCL4_BOVIN (Q17QA1 ), CCL4_CANLF (Q68AZ0 ), CCL4_CHICK (Q90826 ), CCL4_HUMAN (P13236 ), CCL4_MACMU (Q8HYQ2 ), CCL4_MOUSE (P14097 ), CCL4_PIG (Q711P4 ), CCL4_RABIT (P46632 ), CCL4_RAT (P50230 ), CCL5_BOVIN (O97919 ), CCL5_CANLF (Q8HYS0 ), CCL5_CAVPO (P97272 ), CCL5_FELCA (Q8SQ40 ), CCL5_HORSE (Q8MKD0 ), CCL5_HUMAN (P13501 ), CCL5_MACMU (Q8HYQ1 ), CCL5_MOUSE (P30882 ), CCL5_RAT (P50231 ), CCL5_SIGHI (Q91ZL1 ), CCL6_MOUSE (P27784 ), CCL6_RAT (Q68FP3 ), CCL7_HUMAN (P80098 ), CCL7_MOUSE (Q03366 ), CCL7_RAT (Q9QXY8 ), CCL8_BOVIN (Q09141 ), CCL8_CANLF (Q68AY9 ), CCL8_HUMAN (P80075 ), CCL8_MOUSE (Q9Z121 ), CCL8_PIG (P49873 ), CCL9_MOUSE (P51670 ), CL3L1_HUMAN (P16619 ), MCPB_BOVIN (P80343 ), REG1_BOVIN (P82943 ), VMI2_HHV8P (Q98157 )» more
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UniProtKB/Swiss-Prot False negative sequences |
14 sequences
CC21A_MOUSE (P84444 ), CC21B_MOUSE (P86792 ), CC21C_MOUSE (P86793 ), CCL20_RAT (P97884 ), CCL21_HUMAN (O00585 ), CCL21_MACMU (Q8HYP5 ), CCL24_CANLF (Q68Y86 ), CCL24_HUMAN (O00175 ), CCL25_HUMAN (O15444 ), CCL25_MOUSE (O35903 ), CCL25_PIG (Q4PR21 ), CCL27_HUMAN (Q9Y4X3 ), CCL27_MOUSE (Q9Z1X0 ), CCL28_MOUSE (Q9JIL2 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
CCL5_PIG (Q29288 ) |
PDB [Detailed view] |
88 PDB
1B3A; 1B50; 1B53; 1BO0; 1CM9; 1DOK; 1DOL; 1DOM; 1DON; 1EL0; 1EOT; 1ESR; 1G2S; 1G2T; 1G91; 1HA6; 1HFG; 1HFN; 1HHV; 1HRJ; 1HUM; 1HUN; 1M8A; 1ML0; 1NCV; 1NR2; 1NR4; 1RTN; 1RTO; 1U4L; 1U4M; 1U4P; 1U4R; 1VMP; 2BDN; 2EOT; 2FFK; 2FHT; 2FIN; 2FJ2; 2HCC; 2HCI; 2JYO; 2L9H; 2MP1; 2MPM; 2NZ1; 2Q8R; 2Q8T; 2RA4; 2VXW; 2X69; 2X6G; 2X6L; 3FPU; 3H44; 3IFD; 3KBX; 3TN2; 4DN4; 4MHE; 4OIJ; 4OIK; 4R8I; 4RA8; 4RAL; 4RWS; 4ZK9; 4ZKB; 4ZKC; 4ZLT; 5CMD; 5COR; 5COY; 5D65; 5DNF; 5L2U; 5LTL; 5UIW; 5UR7; 5WK3; 5YAM; 6AEZ; 6C6D; 6CWS; 6FGP; 6STK; 6WWZ » more |