PROSITE entry PS00484
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General information about the entry
Entry name [info] | THYROGLOBULIN_1_1 |
Accession [info] | PS00484 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-JUL-1999 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00377 |
Name and characterization of the entry
Description [info] | Thyroglobulin type-1 repeat signature. |
Pattern [info] |
[FYWHPVAS]-x(3)-C-x(3,4)-[SG]-x-[FYW]-x(3)-Q-x(5,12)-[FYW]-C-[VA]- x(3,4)-[SG]. |
Numerical results [info]
Total number of hits | 122 in 74 different sequences |
Number of true positive hits | 122 in 74 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 98.39 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 9 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
74 sequences
COW_DROME (Q9VCR3), EPCAM_BOVIN (Q3T0L5), EPCAM_CHICK (Q5F381), EPCAM_HUMAN (P16422), EPCAM_MACMU (Q1WER1), EPCAM_MOUSE (Q99JW5), EPCAM_PIG (Q75QW1), EPCAM_RAT (O55159), EQSTC_ACTEQ (P81439), HG2A_HUMAN (P04233), HG2A_MOUSE (P04441), HG2A_RAT(P10247), IBP1_BOVIN (P24591), IBP1_HUMAN (P08833), IBP1_ICTTR (Q6Q484), IBP1_MOUSE (P47876), IBP1_PIG(Q75ZP3), IBP1_RAT(P21743), IBP2A_DANRE (Q9PTH3), IBP2_BOVIN (P13384), IBP2_CHICK (P49705), IBP2_HUMAN (P18065), IBP2_MOUSE (P47877), IBP2_PIG(P24853), IBP2_RAT(P12843), IBP2_SHEEP (Q29400), IBP2_XENLA (Q5XHC5), IBP2_XENTR (A4IIA2), IBP3_BOVIN (P20959), IBP3_HUMAN (P17936), IBP3_MOUSE (P47878), IBP3_PIG(P16611), IBP3_RAT(P15473), IBP4_BOVIN (Q05716), IBP4_HUMAN (P22692), IBP4_MOUSE (P47879), IBP4_PIG(P24854), IBP4_RAT(P21744), IBP4_SHEEP (Q28893), IBP5_BOVIN (Q05717), IBP5_HUMAN (P24593), IBP5_MOUSE (Q07079), IBP5_PIG(Q28985), IBP5_RAT(P24594), IBP5_XENLA (Q90WV8), IBP6_BOVIN (Q05718), IBP6_HUMAN (P24592), IBP6_MOUSE (P47880), IBP6_RAT(P35572), NID1_HUMAN (P14543), NID1_MOUSE (P10493), NID2_HUMAN (Q14112), NID2_MOUSE (O88322), NID2_RAT(B5DFC9), SAX_LITCT (P31226), SMOC1_HUMAN (Q9H4F8), SMOC1_MOUSE (Q8BLY1), SMOC2_HUMAN (Q9H3U7), SMOC2_MOUSE (Q8CD91), TACD2_HUMAN (P09758), TACD2_MOUSE (Q8BGV3), TACD2_RAT (Q6P9Z6), THYG_BOVIN (P01267), THYG_HUMAN (P01266), THYG_MOUSE (O08710), THYG_PIG(F1RRV3), THYG_RAT(P06882), TICN1_HUMAN (Q08629), TICN1_MOUSE (Q62288), TICN2_HUMAN (Q92563), TICN2_MOUSE (Q9ER58), TICN3_HUMAN (Q9BQ16), TICN3_MOUSE (Q8BKV0), TICN3_PONAB (Q5RD69)» more
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UniProtKB/Swiss-Prot False negative sequences |
2 sequences
IBP2B_DANRE (B3F211), PN16_PHONI (P84032) |
PDB [Detailed view] |
26 PDB
1ICF; 1L3H; 1RMJ; 1ZT3; 1ZT5; 2DSQ; 2DSR; 2H7T; 4MZV; 6I07; 6O0D; 6O0E; 6O0F; 6SCJ; 7B75; 7E5M; 7E5N; 7PEE; 7QTQ; 7UFG; 7WRQ; 8D6P; 8D6Q; 8D6S; 8D6T; 8D6U » more |