PROSITE entry PS00496
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General information about the entry
| Entry name [info] | PII_GLNB_UMP |
| Accession [info] | PS00496 |
| Entry type [info] | PATTERN |
| Date [info] |
01-MAY-1991 CREATED;
01-JUL-2003 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00439 |
Name and characterization of the entry
| Description [info] | P-II protein uridylation site. |
| Pattern [info] |
Y-[KR]-G-[AS]-[AE]-Y. |
Numerical results [info]
| Total number of hits | 43 in 43 different sequences |
| Number of true positive hits | 31 in 31 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 12 in 12 different sequences |
| Number of false negative sequences | 5 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 72.09 % |
| Recall (true positives / (true positives + false negatives)) | 86.11 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | uridylation at position 6 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
31 sequences
GLNB_AZOBR (P21193), GLNB_BRADU (P14179), GLNB_CERSP (P43519), GLNB_ECO57 (P0A9Z3), GLNB_ECOL6 (P0A9Z2), GLNB_ECOLI (P0A9Z1), GLNB_HAEIN (P43795), GLNB_KLEOX (P11671), GLNB_MICDP (Q47894), GLNB_MYCBO (P64250), GLNB_MYCTO (P9WN30), GLNB_MYCTU (P9WN31), GLNB_NEOYE (Q1XDN3), GLNB_NOSP7 (O30794), GLNB_PASMU (Q9CJK1), GLNB_PORPU (P51254), GLNB_RHILO (Q98N18), GLNB_RHILV (P09827), GLNB_RHIME (Q52905), GLNB_RHOCA (P13556), GLNB_RHORT (Q53044), GLNB_SALTI (P0A9Z5), GLNB_SALTY (P0A9Z4), GLNB_SHIFL (P0A9Z6), GLNB_SYNE7 (P0A3F4), GLNB_SYNP6 (P0A3F5), GLNB_SYNY3 (Q55247), GLNK_ECO57 (P0AC57), GLNK_ECOL6 (P0AC56), GLNK_ECOLI (P0AC55), GLNK_SHIFL (P0AC58)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
5 sequences
GLNB_AQUAE (O66513), GLNB_CYACA (Q9TM37), GLNB_RHIEC (O54053), GLNK1_HALMT (B8ZYW0), GLNK2_HALMT (B8ZYW1)» more |
| UniProtKB/Swiss-Prot False positive sequences |
12 sequences
ATS15_HUMAN (Q8TE58), ATS15_MOUSE (P59384), AX22B_VIGRR (P32294), FTSQ_PSEAE (G3XDA7), GLND_COLP3 (Q485H4), IAA4_PEA(P49679), KINH_CAEEL (P34540), RL24_LEPIC (Q72NH2), RL24_LEPIN (Q9XD25), YIDC_PROMI (P22833), YIDC_WIGBR (Q8D3I8), YIDC_YERPE (Q8Z9U3)» more |
| PDB [Detailed view] |
20 PDB
1GNK; 1PIL; 1QY7; 1UL3; 2GNK; 2JJ4; 2NUU; 2PII; 2V5H; 2XBP; 2XG8; 2XUL; 2XZW; 3BZQ; 3LF0; 4AFF; 4C3K; 4C3L; 4C3M; 5L9N » more |