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Entry: PS00496

General information about the entry

Entry name [info] PII_GLNB_UMP
Accession [info] PS00496
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-JUL-2003 DATA UPDATE;
02-JUN-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00439

Name and characterization of the entry

Description [info] P-II protein uridylation site.
Pattern [info] 
Y-[KR]-G-[AS]-[AE]-Y.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_03 which contains 565'254 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 31 in 31 different sequences
Number of 'unknown' hits 0
Number of false positive hits 12 in 12 different sequences
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 72.09 %
Recall (true positives / (true positives + false negatives)) 86.11 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] uridylation at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 31 sequences 

GLNB_AZOBR  (P21193    ), GLNB_BRADU  (P14179    ), GLNB_ECO57  (P0A9Z3    ), 

GLNB_ECOL6  (P0A9Z2    ), GLNB_ECOLI  (P0A9Z1    ), GLNB_HAEIN  (P43795    ), 
GLNB_KLEOX  (P11671    ), GLNB_MICDP  (Q47894    ), GLNB_MYCBO  (P64250    ), 
GLNB_MYCTO  (P9WN30    ), GLNB_MYCTU  (P9WN31    ), GLNB_NOSP7  (O30794    ), 
GLNB_PASMU  (Q9CJK1    ), GLNB_PORPU  (P51254    ), GLNB_PYRYE  (Q1XDN3    ), 
GLNB_RHILO  (Q98N18    ), GLNB_RHILV  (P09827    ), GLNB_RHIME  (Q52905    ), 
GLNB_RHOCA  (P13556    ), GLNB_RHORT  (Q53044    ), GLNB_RHOSH  (P43519    ), 
GLNB_SALTI  (P0A9Z5    ), GLNB_SALTY  (P0A9Z4    ), GLNB_SHIFL  (P0A9Z6    ), 
GLNB_SYNE7  (P0A3F4    ), GLNB_SYNP6  (P0A3F5    ), GLNB_SYNY3  (Q55247    ), 
GLNK_ECO57  (P0AC57    ), GLNK_ECOL6  (P0AC56    ), GLNK_ECOLI  (P0AC55    ), 
GLNK_SHIFL  (P0AC58    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

GLNB_AQUAE  (O66513    ), GLNB_CYACA  (Q9TM37    ), GLNB_RHIEC  (O54053    ), 

GLNK1_HALMT (B8ZYW0    ), GLNK2_HALMT (B8ZYW1    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 12 sequences 

ATS15_HUMAN (Q8TE58    ), ATS15_MOUSE (P59384    ), AX22B_VIGRR (P32294    ), 

FTSQ_PSEAE  (G3XDA7    ), GLND_COLP3  (Q485H4    ), IAA4_PEA    (P49679    ), 
KINH_CAEEL  (P34540    ), RL24_LEPIC  (Q72NH2    ), RL24_LEPIN  (Q9XD25    ), 
YIDC_PROMI  (P22833    ), YIDC_WIGBR  (Q8D3I8    ), YIDC_YERPE  (Q8Z9U3    )
» more

PDB
[Detailed view]		 20 PDB

1GNK; 1PIL; 1QY7; 1UL3; 2GNK; 2JJ4; 2NUU; 2PII; 2V5H; 2XBP; 2XG8; 2XUL; 2XZW; 3BZQ; 3LF0; 4AFF; 4C3K; 4C3L; 4C3M; 5L9N
» more

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