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Entry: PS00502 |
Entry name [info] | POLYGALACTURONASE |
Accession [info] | PS00502 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-NOV-1997 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00415 |
Associated ProRule [info] | PRU10052 |
Description [info] | Polygalacturonase active site. |
Pattern [info] |
[GSDENKRH]-x(2)-[VMFC]-x(2)-[GS]-H-G-[LIVMAG]-x(1,2)-[LIVM]-G-S. |
Total number of hits | 108 in 108 different sequences |
Number of true positive hits | 108 in 108 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 54 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 66.67 % |
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site at position 6 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
108 sequences
ADPG1_ARATH (O23147 ), ADPG2_ARATH (Q8RY29 ), PEHX_DICCH (P15922 ), PGLR1_ARATH (P49062 ), PGLR1_ASPAC (O74213 ), PGLR1_ASPCL (A1CIV8 ), PGLR1_ASPFN (B8N8M2 ), PGLR1_ASPNC (A2QAH3 ), PGLR1_ASPNG (P26213 ), PGLR1_ASPOR (Q2UHL4 ), PGLR1_ASPTN (Q0CMU3 ), PGLR1_COLLN (Q00446 ), PGLR1_MAIZE (P26216 ), PGLR1_PECCC (P18192 ), PGLR1_PENOL (Q9Y834 ), PGLR1_SCLSC (Q12708 ), PGLR2_ARATH (P49063 ), PGLR2_ASPAC (Q70HJ4 ), PGLR2_ASPAW (Q9P359 ), PGLR2_ASPKW (Q8NK98 ), PGLR2_ASPNA (P26214 ), PGLR2_ASPNC (A2R5S4 ), PGLR2_ASPNG (P0CU55 ), PGLR2_ASPTU (P0CU54 ), PGLR2_CHAOB (Q7M1E7 ), PGLR2_CRYJA (P43212 ), PGLR2_JUNAS (Q9FY19 ), PGLR2_MAIZE (P35338 ), PGLR2_PECPM (P26509 ), PGLR2_PENOL (Q9Y833 ), PGLR3_ARATH (Q9LW07 ), PGLR3_MAIZE (P35339 ), PGLR4_ARATH (Q949Z1 ), PGLR5_ARATH (Q94AJ5 ), PGLRA_ASPAW (Q9P358 ), PGLRA_ASPFA (P41749 ), PGLRA_ASPFC (B0Y4Z4 ), PGLRA_ASPFU (Q4WQT2 ), PGLRA_ASPKW (Q8NK99 ), PGLRA_ASPNC (A2R8F8 ), PGLRA_ASPNG (Q9P4W4 ), PGLRA_ASPPA (P49575 ), PGLRA_NEOFI (A1CVV8 ), PGLRB_ASPFA (P41750 ), PGLRB_ASPFC (B0YAH0 ), PGLRB_ASPFN (B8N7Z8 ), PGLRB_ASPFU (Q4WBE1 ), PGLRB_ASPKA (Q1HAY5 ), PGLRB_ASPNC (A2QCV8 ), PGLRB_ASPNG (Q9P4W3 ), PGLRB_ASPOR (P35335 ), PGLRB_EMENI (Q5B508 ), PGLRB_NEOFI (A1DAQ2 ), PGLRD_ASPFN (B8MW78 ), PGLRD_ASPNC (A2QTU0 ), PGLRD_ASPNG (Q9P4W2 ), PGLRD_ASPOR (Q2UT29 ), PGLRD_EMENI (Q5AYH4 ), PGLRD_NEOFI (A1DBR6 ), PGLRE_ASPNC (A2QBB6 ), PGLRE_ASPNG (O42809 ), PGLRX_ASPFC (B0YDE8 ), PGLRX_ASPFN (B8NG16 ), PGLRX_ASPFU (Q4WCZ8 ), PGLRX_ASPNC (A2R060 ), PGLRX_ASPNG (Q27UB3 ), PGLRX_ASPTN (Q0CGP0 ), PGLRX_ASPTU (Q00293 ), PGLRX_COCCA (Q00359 ), PGLRX_NEOFI (A1DLC1 ), PGLR_ACTDE (P35336 ), PGLR_ASPFC (B0XPA1 ), PGLR_ASPFU (Q4WR80 ), PGLR_BRANA (P35337 ), PGLR_COCCA (P26215 ), PGLR_CUPSE (C0HKB1 ), PGLR_EMENI (Q5ATQ3 ), PGLR_GIBFU (Q07181 ), PGLR_GOSBA (Q39766 ), PGLR_GOSHI (Q39786 ), PGLR_MALDO (P48978 ), PGLR_MEDSA (Q40312 ), PGLR_NEOFI (A1D145 ), PGLR_OENOR (P24548 ), PGLR_PENDI (Q9Y718 ), PGLR_PENEN (O59925 ), PGLR_PENGR (O93883 ), PGLR_PENJA (O42824 ), PGLR_PERAE (Q02096 ), PGLR_PRUPE (P48979 ), PGLR_RALSL (P20041 ), PGLR_RALSO (P58598 ), PGLR_RHIRD (P27644 ), PGLR_SOLLC (P05117 ), PGLR_TOBAC (Q05967 ), PGLR_YEAST (P47180 ), PGLX1_EMENI (Q5ASG9 ), PGLX2_EMENI (Q5ARN5 ), PGXA_ASPNC (A2QW66 ), PGXA_ASPNG (Q27UB2 ), QRT2_ARATH (Q9SFB7 ), SALK6_KALTU (W8P8Q3 ), XGHA_ASPFC (B0Y9F8 ), XGHA_ASPFN (B8NPS8 ), XGHA_ASPFU (Q4WBT4 ), XGHA_ASPOR (Q2UBD8 ), XGHA_EMENI (Q5B7U1 ), XGHA_NEOFI (A1DBT5 )» more
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UniProtKB/Swiss-Prot False negative sequences |
54 sequences
PGLR2_PLAAC (Q6H9K0 ), PGLR6_ARATH (O22818 ), PGLRC_ASPAC (Q70HJ3 ), PGLRC_ASPNC (A2QL39 ), PGLRC_ASPNG (Q12554 ), PGLR_PHACE (O97400 ), PGLR_VITVI (A7PZL3 ), PGXB_ASPFC (B0YAA4 ), PGXB_ASPFN (B8NX60 ), PGXB_ASPFU (Q4WBK6 ), PGXB_ASPNC (A2QHG0 ), PGXB_ASPNG (Q27UB1 ), PGXB_ASPOR (Q2TW03 ), PGXB_ASPTN (Q0C7H7 ), PGXB_EMENI (Q873X6 ), PGXB_NEOFI (A1DAX2 ), PGXC_ASPFC (B0XYC4 ), PGXC_ASPFN (B8MZZ6 ), PGXC_ASPFU (Q4WX94 ), PGXC_ASPNC (A2QEW2 ), PGXC_ASPNG (Q27UB0 ), PGXC_ASPOR (Q2UQ40 ), PGXC_ASPTN (Q0CXI3 ), PGXC_NEOFI (A1D7I1 ), RGXA_ASPFN (B8NJB0 ), RGXA_ASPNC (A2QBB4 ), RGXA_ASPNG (Q2EQQ2 ), RGXA_ASPOR (Q2UP32 ), RGXB_ASPNC (A2QG68 ), RGXC_ASPNC (A2RAY7 ), RGXC_NEOFI (A1D415 ), RHGA_ASPAC (Q00001 ), RHGA_ASPFN (B8NK45 ), RHGA_ASPNC (A2QYE5 ), RHGA_ASPNG (P87160 ), RHGA_ASPOR (Q2U293 ), RHGA_EMENI (Q5ARE6 ), RHGB_ASPFC (B0Y0Q3 ), RHGB_ASPFU (Q4WV23 ), RHGB_ASPNC (A2R3G4 ), RHGB_ASPNG (P87161 ), RHGB_ASPOR (Q2TWN8 ), RHGB_ASPTN (Q0CFC7 ), RHGB_NEOFI (A1DED1 ), RHGC_ASPFN (B8NGP8 ), RHGC_ASPNC (A2QLQ5 ), RHGC_ASPOR (Q2UFD2 ), RHGD_ASPNC (A2QWT2 ), RHGE_ASPFN (B8NKB9 ), RHGE_ASPNC (A2QXE8 ), RHGE_ASPNG (Q1ZZM3 ), RHGE_ASPOR (Q2U7A4 ), XGHA_ASPNC (A2QK83 ), XGHA_ASPTU (Q9UUZ2 )» more |
PDB [Detailed view] |
6 PDB
1BHE; 1CZF; 1HG8; 1IA5; 1IB4; 1NHC |