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PROSITE entry PS00506


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PURL: https://purl.expasy.org/prosite/signature/PS00506

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General information about the entry

Entry name [info] BETA_AMYLASE_1
Accession [info] PS00506
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-MAY-1991 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00414

Name and characterization of the entry

Description [info] Beta-amylase active site 1.
Pattern [info] 
H-x-C-G-G-N-V-G-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 84.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 21 sequences 

AMYB_BACCE  (P36924), AMYB_CYTFI  (P96513), AMYB_HORVS  (P82993), 

AMYB_HORVU  (P16098), AMYB_IPOBA  (P10537), AMYB_MAIZE  (P55005), 
AMYB_MEDSA  (O22585), AMYB_NIACI  (P06547), AMYB_PAEPO  (P21543), 
AMYB_SOYBN  (P10538), AMYB_THETU  (P19584), AMYB_TRIRP  (O65015), 
AMYB_VIGUN  (O64407), AMYB_WHEAT  (P93594), BAM1_ARATH  (Q9LIR6), 
BAM2_ARATH  (O65258), BAM3_ARATH  (O23553), BAM5_ARATH  (P25853), 
BAM7_ARATH  (O80831), BAMY1_ORYSJ (Q9AV88), BAMY2_ORYSJ (Q10RZ1)
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

BAM4_ARATH  (Q9FM68), BAM6_ARATH  (Q8L762), BAM8_ARATH  (Q9FH80), 

BAM9_ARATH  (Q8VYW2)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

AMYB_SECCE  (P30271)


				
	

	

		PDB
[Detailed view]		
		
			47 PDB
			


			1B1Y; 1B90; 1B9Z; 1BFN; 1BTC; 1BYA; 1BYB; 1BYC; 1BYD; 1FA2; 1ITC; 1J0Y; 
			
				1J0Z; 1J10; 1J11; 1J12; 1J18; 1Q6C; 1Q6D; 1Q6E; 1Q6F; 1Q6G; 1UKO; 1UKP; 
				1V3H; 1V3I; 1VEM; 1VEN; 1VEO; 1VEP; 1WDP; 1WDQ; 1WDR; 1WDS; 2XFF; 2XFR; 
				2XFY; 2XG9; 2XGB; 2XGI; 3VOC; 5BCA; 5WQS; 5WQU; 6GER; 8J5D; 8ZRZ
			
			

			» more