PROSITE entry PS00512
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General information about the entry
Entry name [info] | ALPHA_GALACTOSIDASE |
Accession [info] | PS00512 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1991 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00443 |
Name and characterization of the entry
Description [info] | Alpha-galactosidase signature. |
Pattern [info] |
G-[LIVMFY]-x(2)-[LIVMFY]-x-[LIVM]-D-[DF]-x(1,2)-W-x(3,7)-[RV]-[DNSF]. |
Numerical results [info]
Total number of hits | 51 in 51 different sequences |
Number of true positive hits | 49 in 49 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 22 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 96.08 % |
Recall (true positives / (true positives + false negatives)) | 69.01 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
49 sequences
AGAA_GEOSE (Q9ALJ4), AGAL1_ARATH (Q9FT97), AGAL1_PEDPE (P43467), AGAL2_ARATH (Q8RX86), AGAL2_HYPJE (Q92457), AGAL2_PEDPE (P43469), AGAL3_ARATH (Q8VXZ7), AGALA_ASPNC (A2QL72), AGALA_ASPNG (P28351), AGALB_ASPCL (A1C5D3), AGALB_ASPFC (B0Y224), AGALB_ASPFN (B8N306), AGALB_ASPFU (Q4WE86), AGALB_ASPNC (A2QEJ9), AGALB_ASPNG (Q9Y865), AGALB_ASPOR (Q2UJ97), AGALB_EMENI (Q5AVQ6), AGALB_NEOFI (A1D0A3), AGALB_PENSI (O94221), AGALB_TALEM (A7XZT2), AGALC_ASPFN (B8NWY6), AGALC_ASPNG (Q9UUZ4), AGALC_ASPOR (Q2TW69), AGAL_CELJU (B3PGJ1), AGAL_COFAR (Q42656), AGAL_CYATE (P14749), AGAL_HUMAN (P06280), AGAL_MOUSE (P51569), AGAL_ORYSJ (Q9FXT4), AGAL_SCHPO (Q9URZ0), AGAL_STRMU (P27756), AGASK_RUMGN (G4T4R7), IMD_ARTGO (Q44052), MEL1_YEASX (P04824), MEL2_YEASX (P41945), MEL5_YEASX (P41946), MEL6_YEASX (P41947), MELA_LACAC (G1UB44), MEL_LACCI (Q99172), MEL_SACMI (Q11129), MEL_SACPA (Q09187), MEL_TORDE (Q9UVD6), MEL_ZYGMR (Q9P4V4), NAGAB_BOVIN (Q58DH9), NAGAB_CHICK (Q90744), NAGAB_HUMAN (P17050), NAGAB_MOUSE (Q9QWR8), NAGAB_RAT (Q66H12), RAFA_ECOLX (P16551)» more
|
UniProtKB/Swiss-Prot False negative sequences |
22 sequences
AGAL3_HYPJE (Q92451), AGAL8_EMENI (C8VJZ7), AGALA_ASPCL (A1CBW8), AGALA_ASPFN (B8MWJ5), AGALA_ASPFU (Q4WVZ3), AGALA_ASPOR (Q2UT06), AGALA_ASPTN (Q0CPK2), AGALA_NEOFI (A1DDD8), AGALC_ASPTN (Q0CVH2), AGALC_EMENI (Q5AU92), AGALD_ASPFC (B0YEK2), AGALD_ASPFN (B8N7Z0), AGALD_ASPFU (A4DA70), AGALD_ASPNC (A2R2S6), AGALD_ASPOR (Q2UI87), AGALD_ASPTN (Q0CVX4), AGALD_EMENI (Q5AX28), AGALD_NEOFI (A1D9S3), AGALG_ASPTN (Q0CEF5), AGALG_EMENI (Q5ARP5), AGAL_THEMA (G4FEF4), MEL_SACCA (Q03647)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
AGAL_CAPAA (P86073), NAGAB_BOSIN (P83127) |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
POXI_PENO1 (S8B3I4), POXI_PENOX (A0A1W5T323) |
PDB [Detailed view] |
44 PDB
1KTB; 1KTC; 1R46; 1R47; 1UAS; 2XN0; 2XN1; 2XN2; 2YFN; 2YFO; 3GXN; 3GXP; 3GXT; 3H53; 3H54; 3H55; 3HG2; 3HG3; 3HG4; 3HG5; 3IGU; 3LRK; 3LRL; 3LRM; 3LX9; 3LXA; 3LXB; 3LXC; 3S5Y; 3S5Z; 3TV8; 4DO4; 4DO5; 4DO6; 4FNP; 4FNR; 4FNS; 4FNT; 4FNU; 4NXS; 6IBK; 6IBM; 6IBR; 6IBT » more |