PROSITE entry PS00512
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00512
Direct ScanProsite submission
General information about the entry
Entry name [info] | ALPHA_GALACTOSIDASE |
Accession [info] | PS00512 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1991 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00443 |
Name and characterization of the entry
Description [info] | Alpha-galactosidase signature. |
Pattern [info] |
G-[LIVMFY]-x(2)-[LIVMFY]-x-[LIVM]-D-[DF]-x(1,2)-W-x(3,7)-[RV]-[DNSF]. |
Numerical results [info]
Total number of hits | 51 in 51 different sequences |
Number of true positive hits | 49 in 49 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 22 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 96.08 % |
Recall (true positives / (true positives + false negatives)) | 69.01 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
49 sequences
AGAA_GEOSE (Q9ALJ4), AGAL1_ARATH (Q9FT97), AGAL1_PEDPE (P43467), AGAL2_ARATH (Q8RX86), AGAL2_HYPJE (Q92457), AGAL2_PEDPE (P43469), AGAL3_ARATH (Q8VXZ7), AGALA_ASPNC (A2QL72), AGALA_ASPNG (P28351), AGALB_ASPCL (A1C5D3), AGALB_ASPFC (B0Y224), AGALB_ASPFN (B8N306), AGALB_ASPFU (Q4WE86), AGALB_ASPNC (A2QEJ9), AGALB_ASPNG (Q9Y865), AGALB_ASPOR (Q2UJ97), AGALB_EMENI (Q5AVQ6), AGALB_NEOFI (A1D0A3), AGALB_PENSI (O94221), AGALB_TALEM (A7XZT2), AGALC_ASPFN (B8NWY6), AGALC_ASPNG (Q9UUZ4), AGALC_ASPOR (Q2TW69), AGAL_CELJU (B3PGJ1), AGAL_COFAR (Q42656), AGAL_CYATE (P14749), AGAL_HUMAN (P06280), AGAL_MOUSE (P51569), AGAL_ORYSJ (Q9FXT4), AGAL_SCHPO (Q9URZ0), AGAL_STRMU (P27756), AGASK_MEDGN (G4T4R7), IMD_ARTGO (Q44052), MEL1_YEASX (P04824), MEL2_YEASX (P41945), MEL5_YEASX (P41946), MEL6_YEASX (P41947), MELA_LACAC (G1UB44), MEL_LACCI (Q99172), MEL_SACMI (Q11129), MEL_SACPA (Q09187), MEL_TORDE (Q9UVD6), MEL_ZYGMR (Q9P4V4), NAGAB_BOVIN (Q58DH9), NAGAB_CHICK (Q90744), NAGAB_HUMAN (P17050), NAGAB_MOUSE (Q9QWR8), NAGAB_RAT (Q66H12), RAFA_ECOLX (P16551)» more
|
UniProtKB/Swiss-Prot False negative sequences |
22 sequences
AGAL3_HYPJE (Q92451), AGAL8_EMENI (C8VJZ7), AGALA_ASPCL (A1CBW8), AGALA_ASPFN (B8MWJ5), AGALA_ASPFU (Q4WVZ3), AGALA_ASPOR (Q2UT06), AGALA_ASPTN (Q0CPK2), AGALA_NEOFI (A1DDD8), AGALC_ASPTN (Q0CVH2), AGALC_EMENI (Q5AU92), AGALD_ASPFC (B0YEK2), AGALD_ASPFN (B8N7Z0), AGALD_ASPFU (A4DA70), AGALD_ASPNC (A2R2S6), AGALD_ASPOR (Q2UI87), AGALD_ASPTN (Q0CVX4), AGALD_EMENI (Q5AX28), AGALD_NEOFI (A1D9S3), AGALG_ASPTN (Q0CEF5), AGALG_EMENI (Q5ARP5), AGAL_THEMA (G4FEF4), MEL_SACCA (Q03647)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
AGAL_CAPAA (P86073), NAGAB_BOSIN (P83127) |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
POXI_PENO1 (S8B3I4), POXI_PENOX (A0A1W5T323) |
PDB [Detailed view] |
54 PDB
pdb_00001ktb; pdb_00001ktc; pdb_00001r46; pdb_00001r47; pdb_00001uas; pdb_00002xn0; pdb_00002xn1; pdb_00002xn2; pdb_00002yfn; pdb_00002yfo; pdb_00003gxn; pdb_00003gxp; pdb_00003gxt; pdb_00003h53; pdb_00003h54; pdb_00003h55; pdb_00003hg2; pdb_00003hg3; pdb_00003hg4; pdb_00003hg5; pdb_00003igu; pdb_00003lrk; pdb_00003lrl; pdb_00003lrm; pdb_00003lx9; pdb_00003lxa; pdb_00003lxb; pdb_00003lxc; pdb_00003s5y; pdb_00003s5z; pdb_00003tv8; pdb_00004do4; pdb_00004do5; pdb_00004do6; pdb_00004fnp; pdb_00004fnr; pdb_00004fns; pdb_00004fnt; pdb_00004fnu; pdb_00004nxs; pdb_00006ibk; pdb_00006ibm; pdb_00006ibr; pdb_00006ibt; pdb_00008k7d; pdb_00008k7e; pdb_00008k7f; pdb_00008k7g; pdb_00008k7h; pdb_00008k7i; pdb_00008k7j; pdb_00008k7k; pdb_00008k7l; pdb_00009avs » more |