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PROSITE entry PS00512


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General information about the entry

Entry name [info] ALPHA_GALACTOSIDASE
Accession [info] PS00512
Entry type [info] PATTERN
Date [info] 01-JUN-1991 CREATED;
01-DEC-2004 DATA UPDATE;
03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00443

Name and characterization of the entry

Description [info] Alpha-galactosidase signature.
Pattern [info] 
G-[LIVMFY]-x(2)-[LIVMFY]-x-[LIVM]-D-[DF]-x(1,2)-W-x(3,7)-[RV]-[DNSF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.


Total number of hits 51 in 51 different sequences
Number of true positive hits 49 in 49 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 22
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 96.08 %
Recall (true positives / (true positives + false negatives)) 69.01 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 49 sequences 

AGAA_GEOSE  (Q9ALJ4    ), AGAL1_ARATH (Q9FT97    ), AGAL1_PEDPE (P43467    ), 

AGAL2_ARATH (Q8RX86    ), AGAL2_HYPJE (Q92457    ), AGAL2_PEDPE (P43469    ), 
AGAL3_ARATH (Q8VXZ7    ), AGALA_ASPNC (A2QL72    ), AGALA_ASPNG (P28351    ), 
AGALB_ASPCL (A1C5D3    ), AGALB_ASPFC (B0Y224    ), AGALB_ASPFN (B8N306    ), 
AGALB_ASPFU (Q4WE86    ), AGALB_ASPNC (A2QEJ9    ), AGALB_ASPNG (Q9Y865    ), 
AGALB_ASPOR (Q2UJ97    ), AGALB_EMENI (Q5AVQ6    ), AGALB_NEOFI (A1D0A3    ), 
AGALB_PENSI (O94221    ), AGALB_TALEM (A7XZT2    ), AGALC_ASPFN (B8NWY6    ), 
AGALC_ASPNG (Q9UUZ4    ), AGALC_ASPOR (Q2TW69    ), AGAL_CELJU  (B3PGJ1    ), 
AGAL_COFAR  (Q42656    ), AGAL_CYATE  (P14749    ), AGAL_HUMAN  (P06280    ), 
AGAL_MOUSE  (P51569    ), AGAL_ORYSJ  (Q9FXT4    ), AGAL_SCHPO  (Q9URZ0    ), 
AGAL_STRMU  (P27756    ), AGASK_RUMGN (G4T4R7    ), IMD_ARTGO   (Q44052    ), 
MEL1_YEASX  (P04824    ), MEL2_YEASX  (P41945    ), MEL5_YEASX  (P41946    ), 
MEL6_YEASX  (P41947    ), MELA_LACAC  (G1UB44    ), MEL_LACCI   (Q99172    ), 
MEL_SACMI   (Q11129    ), MEL_SACPA   (Q09187    ), MEL_TORDE   (Q9UVD6    ), 
MEL_ZYGMR   (Q9P4V4    ), NAGAB_BOVIN (Q58DH9    ), NAGAB_CHICK (Q90744    ), 
NAGAB_HUMAN (P17050    ), NAGAB_MOUSE (Q9QWR8    ), NAGAB_RAT   (Q66H12    ), 
RAFA_ECOLX  (P16551    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 22 sequences 

AGAL3_HYPJE (Q92451    ), AGAL8_EMENI (C8VJZ7    ), AGALA_ASPCL (A1CBW8    ), 

AGALA_ASPFN (B8MWJ5    ), AGALA_ASPFU (Q4WVZ3    ), AGALA_ASPOR (Q2UT06    ), 
AGALA_ASPTN (Q0CPK2    ), AGALA_NEOFI (A1DDD8    ), AGALC_ASPTN (Q0CVH2    ), 
AGALC_EMENI (Q5AU92    ), AGALD_ASPFC (B0YEK2    ), AGALD_ASPFN (B8N7Z0    ), 
AGALD_ASPFU (A4DA70    ), AGALD_ASPNC (A2R2S6    ), AGALD_ASPOR (Q2UI87    ), 
AGALD_ASPTN (Q0CVX4    ), AGALD_EMENI (Q5AX28    ), AGALD_NEOFI (A1D9S3    ), 
AGALG_ASPTN (Q0CEF5    ), AGALG_EMENI (Q5ARP5    ), AGAL_THEMA  (G4FEF4    ), 
MEL_SACCA   (Q03647    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

AGAL_CAPAA  (P86073    ), NAGAB_BOSIN (P83127    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
POXI_PENO1  (S8B3I4    ), POXI_PENOX  (A0A1W5T323)


				
	

	

		PDB
[Detailed view]		
		
			44 PDB
			


			1KTB; 1KTC; 1R46; 1R47; 1UAS; 2XN0; 2XN1; 2XN2; 2YFN; 2YFO; 3GXN; 3GXP; 
			
				3GXT; 3H53; 3H54; 3H55; 3HG2; 3HG3; 3HG4; 3HG5; 3IGU; 3LRK; 3LRL; 3LRM; 
				3LX9; 3LXA; 3LXB; 3LXC; 3S5Y; 3S5Z; 3TV8; 4DO4; 4DO5; 4DO6; 4FNP; 4FNR; 
				4FNS; 4FNT; 4FNU; 4NXS; 6IBK; 6IBM; 6IBR; 6IBT
			
			

			» more