Entry: PS00524

General information about the entry

Entry name [info] SMB_1
Accession [info] PS00524
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-DEC-2004 DATA UPDATE; 28-MAR-2018 INFO UPDATE.
PROSITE Doc. [info] PDOC00453

Name and characterization of the entry

Description [info] Somatomedin B domain (SMB) signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2018_03 which contains 557'012 sequence entries.

Total number of hits 53 in 34 different sequences
Number of true positive hits 53 in 34 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.15 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] disulfide(?) at position 1
Site [info] disulfide(?) at position 3
Site [info] disulfide(?) at position 5
Site [info] disulfide(?) at position 7
Site [info] disulfide(?) at position 8
Site [info] disulfide(?) at position 13
Version [info] 1

Cross-references [info]

True positive sequences
34 sequences

ENDOU_BOVIN (A6QLQ8    ), ENDOU_HUMAN (P21128    ), ENDOU_MOUSE (Q3V188    ), 
ENDOU_PAROL (Q9PTU6    ), ENPP1_HUMAN (P22413    ), ENPP1_MOUSE (P06802    ), 
ENPP1_RAT   (Q924C3    ), ENPP2_BOVIN (A1A4K5    ), ENPP2_HUMAN (Q13822    ), 
ENPP2_MOUSE (Q9R1E6    ), ENPP2_RAT   (Q64610    ), ENPP3_BOVIN (P15396    ), 
ENPP3_HUMAN (O14638    ), ENPP3_MOUSE (Q6DYE8    ), ENPP3_PONAB (Q5R5M5    ), 
ENPP3_RAT   (P97675    ), PDE1_CROAD  (J3SEZ3    ), PDE2_CROAD  (J3SBP3    ), 
PRG4_HUMAN  (Q92954    ), PRG4_MOUSE  (Q9JM99    ), SBSPO_BOVIN (Q32L50    ), 
TINAL_HUMAN (Q9GZM7    ), TINAL_MOUSE (Q99JR5    ), TINAL_RAT   (Q9EQT5    ), 
VTNC_HUMAN  (P04004    ), VTNC_MOUSE  (P29788    ), VTNC_PIG    (P48819    ), 
VTNC_RABIT  (P22458    )
» more

False negative sequences
1 sequence

YCF2E_CAEEL (P90850    )

[Detailed view]
47 PDB

1OC0; 1S4G; 1SSU; 2CQW; 2JQ8; 2XR9; 2XRG; 2YS0; 3BT1; 3BT2; 3NKM; 3NKN; 3NKO; 3NKP; 3NKQ; 3NKR; 3WAV; 3WAW; 3WAX; 3WAY; 4B56; 4K24; 4ZG6; 4ZG7; 4ZG9; 4ZGA; 5DLT; 5DLV; 5DLW; 5HRT; 5IJQ; 5IJS; 5INH; 5KXA; 5L0B; 5L0E; 5L0K; 5LIA; 5LQQ; 5M0D; 5M0E; 5M0M; 5M0S; 5M7M; 5MHP; 5OHI; 5OLB
» more

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