PROSITE entry PS00530

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	RNASE_T2_1
Accession [info]	PS00530
Entry type [info]	PATTERN
Date [info]	01-DEC-1991 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00459
Associated ProRule [info]	PRU10045

Name and characterization of the entry

Description [info]	Ribonuclease T2 family histidine active site 1.
Pattern [info]	[FYWL]-x-[LIVM]-H-G-L-[WY]-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	45 in 45 different sequences
Number of true positive hits	44 in 44 different sequences
Number of 'unknown' hits	1
Number of false positive hits	0
Number of false negative sequences	3
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	93.62 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Site [info]	active_site at position 4
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	44 sequences PHYB_PHYPO (P81477), RN26_HAEIN (P44012), RN28_PANGI (P83618), RNDI_DICDI (Q7M438), RNI_AERHY (Q07465), RNI_ECOLI (P21338), RNL2_LENED (P81296), RNLE_SOLLC (P80022), RNLX_SOLLC (P80196), RNMC1_MOMCH (P23540), RNM_ASPPH (P19791), RNOY_MAGGI (Q7M456), RNRH_RHINI (P08056), RNS11_NICAL (Q7SID5), RNS1_ARATH (P42813), RNS1_PYRPY (O80322), RNS2_ANTHI (Q38716), RNS2_ARATH (P42814), RNS2_NICAL (P04007), RNS2_PYRPY (Q40965), RNS2_SOLTU (Q01796), RNS3_ARATH (P42815), RNS3_PETHY (Q40875), RNS3_PYRPY (O80323), RNS4_ANTHI (Q38717), RNS4_PYRPY (Q40966), RNS5_PYRPY (P93460), RNS6_NICAL (Q40379), RNS6_PYRPY (O80324), RNS7_NICAL (Q40381), RNS7_PYRPY (O80325), RNT2A_MOUSE (C0HKG5), RNT2B_MOUSE (C0HKG6), RNT2_ASPOR (P10281), RNT2_DANRE (B8XY56), RNT2_HUMAN (O00584), RNT2_PIG(Q7M329), RNTR_HYPRU (P24657), RNY1_ASPFU (Q4WXZ5), RNY1_CANGA (Q6FP42), RNY1_DEBHA (Q6BHB1), RNY1_EMENI (Q5B3K6), RNY1_YARLI (Q6CAV7), RNY1_YEAST (Q02933) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	3 sequences RNY1A_CANAL (Q5AK94), RNY1B_CANAL (Q5AKB1), RNY1_KLULA (Q6CRT6)
UniProtKB/Swiss-Prot 'Unknown' sequences	1 sequence RNST2_CAEEL (O61887)
PDB [Detailed view]	17 PDB 1BK7; 1BOL; 1DIX; 1IOO; 1IQQ; 1J1F; 1J1G; 1UCA; 1UCC; 1UCD; 1UCG; 1V9H; 2EA1; 2PQX; 2PQY; 2Z70; 3T0O » more