PROSITE entry PS00530

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General information about the entry

Entry name [info]	RNASE_T2_1
Accession [info]	PS00530
Entry type [info]	PATTERN
Date [info]	01-DEC-1991 CREATED; 01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00459
Associated ProRule [info]	PRU10045

Name and characterization of the entry

Description [info]	Ribonuclease T2 family histidine active site 1.
Pattern [info]	[FYWL]-x-[LIVM]-H-G-L-[WY]-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	45 in 45 different sequences
Number of true positive hits	44 in 44 different sequences
Number of 'unknown' hits	1
Number of false positive hits	0
Number of false negative sequences	3
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	93.62 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Site [info]	active_site at position 4
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	44 sequences PHYB_PHYPO (P81477), RN26_HAEIN (P44012), RN28_PANGI (P83618), RNDI_DICDI (Q7M438), RNI_AERHY (Q07465), RNI_ECOLI (P21338), RNL2_LENED (P81296), RNLE_SOLLC (P80022), RNLX_SOLLC (P80196), RNMC1_MOMCH (P23540), RNM_ASPPH (P19791), RNOY_CRAGI (Q7M456), RNRH_RHINI (P08056), RNS11_NICAL (Q7SID5), RNS1_ARATH (P42813), RNS1_PYRPY (O80322), RNS2_ANTHI (Q38716), RNS2_ARATH (P42814), RNS2_NICAL (P04007), RNS2_PYRPY (Q40965), RNS2_SOLTU (Q01796), RNS3_ARATH (P42815), RNS3_PETHY (Q40875), RNS3_PYRPY (O80323), RNS4_ANTHI (Q38717), RNS4_PYRPY (Q40966), RNS5_PYRPY (P93460), RNS6_NICAL (Q40379), RNS6_PYRPY (O80324), RNS7_NICAL (Q40381), RNS7_PYRPY (O80325), RNT2A_MOUSE (C0HKG5), RNT2B_MOUSE (C0HKG6), RNT2_ASPOR (P10281), RNT2_DANRE (B8XY56), RNT2_HUMAN (O00584), RNT2_PIG(Q7M329), RNTR_HYPRU (P24657), RNY1_ASPFU (Q4WXZ5), RNY1_CANGA (Q6FP42), RNY1_DEBHA (Q6BHB1), RNY1_EMENI (Q5B3K6), RNY1_YARLI (Q6CAV7), RNY1_YEAST (Q02933) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	3 sequences RNY1A_CANAL (Q5AK94), RNY1B_CANAL (Q5AKB1), RNY1_KLULA (Q6CRT6)
UniProtKB/Swiss-Prot 'Unknown' sequences	1 sequence RNST2_CAEEL (O61887)
PDB [Detailed view]	17 PDB 1BK7; 1BOL; 1DIX; 1IOO; 1IQQ; 1J1F; 1J1G; 1UCA; 1UCC; 1UCD; 1UCG; 1V9H; 2EA1; 2PQX; 2PQY; 2Z70; 3T0O » more