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PROSITE entry PS00537


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General information about the entry

Entry name [info] CYTOCHROME_B559
Accession [info] PS00537
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00464

Name and characterization of the entry

Description [info] Cytochrome b559 subunits heme-binding site signature.
Pattern [info]
[LIV]-x-[ST]-[LIVF]-R-[FYW]-x(2)-[IVL]-H-[STGAV]-[LIV]-[STGA]-[IV]-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 300 in 300 different sequences
Number of true positive hits 300 in 300 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 19
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.04 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] heme at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
300 sequences

PSBE_ACAM1  (B0C6T2), PSBE_ACOCL  (Q3V518), PSBE_ADICA  (Q85FK5), 
PSBE_AGRST  (A1EA25), PSBE_AMBTC  (Q70XY9), PSBE_ANTAG  (Q85C42), 
PSBE_ARATH  (P56779), PSBE_ATRBE  (P59702), PSBE_BETVU  (P69382), 
PSBE_BIGNA  (Q06J11), PSBE_CALFG  (Q7YJV8), PSBE_CHAGL  (Q8M9W8), 
PSBE_CHAVU  (Q1ACI7), PSBE_CHLRE  (P48268), PSBE_CHLVU  (P56309), 
PSBE_CITSI  (Q09MG1), PSBE_COFAR  (A0A352), PSBE_CROS5  (B1WVS0), 
PSBE_CUCSA  (Q4VZH5), PSBE_CUSGR  (Q8MAV7), PSBE_CUSRE  (A7M969), 
PSBE_CYACA  (Q9TM20), PSBE_CYAM1  (Q85FQ2), PSBE_CYAP4  (B8HVD7), 
PSBE_CYAPA  (P19152), PSBE_DAUCA  (Q0G9U5), PSBE_DRIGR  (Q06GY0), 
PSBE_EMIHU  (Q4G380), PSBE_EUCGG  (Q49KY2), PSBE_EUGGR  (P05333), 
PSBE_GINBI  (Q9THZ3), PSBE_GLOC7  (B7KH62), PSBE_GOSBA  (A0ZZ52), 
PSBE_GOSHI  (Q2L925), PSBE_GRATL  (Q6B8K4), PSBE_GUITH  (O78466), 
PSBE_HELAN  (Q1KXU2), PSBE_HORVU  (P69390), PSBE_HUPLU  (Q5SD43), 
PSBE_JASNU  (Q06RB5), PSBE_LACSA  (Q332W1), PSBE_LIRTU  (Q0G9K2), 
PSBE_LOTJA  (Q9BBR5), PSBE_MAIZE  (P69388), PSBE_MARPO  (P06851), 
PSBE_MESCR  (P36442), PSBE_MESVI  (Q9MUQ0), PSBE_MICAN  (B0JLV1), 
PSBE_MORIN  (Q09X00), PSBE_NEOYE  (Q1XD96), PSBE_NEPOL  (Q9TKY1), 
PSBE_NICSY  (Q3C1L3), PSBE_NICTO  (Q76IC3), PSBE_NOSP7  (B2J6T0), 
PSBE_NOSS1  (Q8YQI2), PSBE_NYMAL  (Q6EW36), PSBE_OENBE  (P05170), 
PSBE_OENEH  (Q9MTK5), PSBE_OLTVI  (Q20EW2), PSBE_ORYNI  (Q6ENF6), 
PSBE_ORYSA  (P0C368), PSBE_ORYSI  (P0C369), PSBE_ORYSJ  (P0C370), 
PSBE_OSTTA  (Q0P3N6), PSBE_PANGI  (Q68RY9), PSBE_PEA(P13554), 
PSBE_PELHO  (Q06FK9), PSBE_PHAAO  (Q3BAM3), PSBE_PHATC  (A0T0A3), 
PSBE_PHYPA  (Q6YXL9), PSBE_PICP2  (Q8RSW3), PSBE_PINKO  (P59703), 
PSBE_PINTH  (P41615), PSBE_PIPCE  (Q06GP3), PSBE_POPAL  (Q14FE0), 
PSBE_POPDE  (P69385), PSBE_PORPU  (P51391), PSBE_PSINU  (Q8WI04), 
PSBE_RIPO1  (B7K626), PSBE_SACHY  (Q6L383), PSBE_SACOF  (Q6ENU7), 
PSBE_SECCE  (P69387), PSBE_SOLBU  (Q2MIH0), PSBE_SOLLC  (Q2MI83), 
PSBE_SOLTU  (Q2VEG1), PSBE_SORBI  (A1E9U1), PSBE_SOYBN  (Q2PMR7), 
PSBE_SPIOL  (P69383), PSBE_STAPU  (Q32RX7), PSBE_STIHE  (Q06SG1), 
PSBE_SYNE7  (Q8KPP3), PSBE_SYNJA  (Q2JS34), PSBE_SYNJB  (Q2JLF0), 
PSBE_SYNP6  (Q5N556), PSBE_SYNY3  (P09190), PSBE_TETOB  (Q1KVR5), 
PSBE_THAPS  (A0T0U2), PSBE_THEVB  (Q8DIP0), PSBE_THEVL  (P12238), 
PSBE_TOBAC  (P69384), PSBE_TRICV  (P49473), PSBE_TRIEI  (Q10YT0), 
PSBE_TRIV2  (Q3MC09), PSBE_TUPAK  (Q3ZJ22), PSBE_VITVI  (Q0ZJ03), 
PSBE_WHEAT  (P69386), PSBE_ZYGCR  (Q32RJ5), PSBF_ACOCL  (Q7J1C5), 
PSBF_ADICA  (Q85FK6), PSBF_AGARO  (Q6EYW3), PSBF_AGRST  (A1EA24), 
PSBF_ALLTE  (Q67HC1), PSBF_AMBTC  (P60248), PSBF_ANACO  (Q67HN7), 
PSBF_ANTAG  (P60249), PSBF_ARATH  (P62095), PSBF_ARIMA  (Q6EYV9), 
PSBF_ASACA  (Q7J1C2), PSBF_ASPOF  (Q67HB3), PSBF_ATRBE  (P60250), 
PSBF_BETVU  (P46613), PSBF_BIGNA  (Q06J12), PSBF_BOWSE  (Q71L83), 
PSBF_BUTUM  (Q67HR9), PSBF_CABCA  (Q7J1C1), PSBF_CALFG  (Q7HKX7), 
PSBF_CALFL  (Q7J1B9), PSBF_CALSE  (Q7H8E7), PSBF_CANWI  (Q6EYV1), 
PSBF_CEDDE  (Q71L79), PSBF_CERDE  (Q7J1B8), PSBF_CERJA  (Q7J1B7), 
PSBF_CHAGL  (P60251), PSBF_CHAVU  (Q1ACI8), PSBF_CHLMO  (P46305), 
PSBF_CHLRE  (Q08363), PSBF_CHLVU  (P56310), PSBF_CITSI  (Q09MG2), 
PSBF_COECR  (Q67HH3), PSBF_COFAR  (A0A351), PSBF_CONAR  (Q7H8E5), 
PSBF_CORMA  (Q6EYU4), PSBF_CRETR  (Q7H8A5), PSBF_CROS5  (B1WVR8), 
PSBF_CUCSA  (Q4VZH6), PSBF_CUNLA  (Q6EYU0), PSBF_CUSEU  (Q8MAW5), 
PSBF_CUSGR  (Q7H823), PSBF_CUSJA  (Q7H834), PSBF_CUSPE  (Q7H825), 
PSBF_CYACA  (Q9TM21), PSBF_CYAM1  (Q85FQ3), PSBF_CYAP4  (B8HVD8), 
PSBF_CYAPA  (P19153), PSBF_CYCRE  (Q71L71), PSBF_DAUCA  (Q0G9U6), 
PSBF_DIOBU  (Q7J1B5), PSBF_DRIGR  (Q06GY1), PSBF_DRIWI  (Q7J1B3), 
PSBF_EMIHU  (Q4G381), PSBF_ENSVE  (Q67HM5), PSBF_EPHSI  (Q8HRZ6), 
PSBF_EUCGG  (Q49KY3), PSBF_EUGGR  (P05334), PSBF_EUOAL  (Q6EYT6), 
PSBF_GINBI  (Q7J1B1), PSBF_GLOC7  (B7KH61), PSBF_GLOVI  (Q7NMA9), 
PSBF_GNEGN  (Q9GFC3), PSBF_GOSBA  (A0ZZ51), PSBF_GOSHI  (Q2L918), 
PSBF_GRATL  (Q6B8K5), PSBF_GUITH  (O78465), PSBF_GUNCH  (Q7HIV1), 
PSBF_HELAN  (Q1KXU3), PSBF_HORVU  (P60126), PSBF_HOUCO  (Q6EYS6), 
PSBF_HUPLU  (Q5SD42), PSBF_HYDCA  (Q7HIV0), PSBF_HYDMC  (Q6EYS3), 
PSBF_ILLPA  (Q7J1A9), PSBF_IPOAL  (Q7H8J8), PSBF_IPOAQ  (Q7H8K9), 
PSBF_IPOBA  (Q7H8K0), PSBF_IPOCC  (Q7H8L6), PSBF_IPOOB  (Q7H8I8), 
PSBF_IPOQU  (Q7H8L3), PSBF_IPOSE  (Q7H8K7), PSBF_IPOWR  (Q7H8L1), 
PSBF_JASNU  (Q06RB6), PSBF_LACFR  (Q7J1A7), PSBF_LACSA  (Q332W2), 
PSBF_LILSU  (Q7HIU8), PSBF_LIRTU  (Q7J1A5), PSBF_LOTJA  (Q9BBR6), 
PSBF_MAGST  (Q7HIU6), PSBF_MAIRA  (Q67HA1), PSBF_MAIZE  (P69523), 
PSBF_MARPO  (P06853), PSBF_MESCR  (P69524), PSBF_MESVI  (Q9MUQ1), 
PSBF_METGY  (Q71L59), PSBF_MICAN  (B0JLV0), PSBF_MONCA  (Q7H828), 
PSBF_MORIN  (Q09X01), PSBF_MUIMA  (Q67H97), PSBF_MUSCM  (Q67H93), 
PSBF_NAREL  (Q67H89), PSBF_NELLU  (Q6EYS0), PSBF_NEOYE  (Q1XD97), 
PSBF_NEPOL  (Q9TKY2), PSBF_NICGU  (Q2UVD8), PSBF_NICSY  (Q7HML6), 
PSBF_NICTO  (Q7HML5), PSBF_NOSP7  (B2J6T1), PSBF_NOSS1  (Q8YQI1), 
PSBF_NYMAL  (Q6EW37), PSBF_NYMOD  (Q7IW40), PSBF_OENBE  (P62097), 
PSBF_OENEH  (P62098), PSBF_OLTVI  (Q20EW3), PSBF_ORYNI  (Q6ENF7), 
PSBF_ORYSA  (P0C399), PSBF_ORYSI  (P0C400), PSBF_ORYSJ  (P0C401), 
PSBF_OSTTA  (Q0P3N7), PSBF_PANGI  (Q68RZ0), PSBF_PARMW  (Q7U9Q0), 
PSBF_PEA(P62096), PSBF_PELHO  (Q06FL0), PSBF_PHAAO  (Q3BAM4), 
PSBF_PHATC  (A0T0A4), PSBF_PHOTN  (Q67HD7), PSBF_PHYAM  (Q6EYR0), 
PSBF_PHYPA  (Q6YXL8), PSBF_PICP2  (Q8RSW2), PSBF_PINKO  (Q85X32), 
PSBF_PINTH  (P41616), PSBF_PIPCE  (Q06GP4), PSBF_POPAL  (Q14FE1), 
PSBF_POPDE  (P62099), PSBF_PORPU  (P51390), PSBF_PROM0  (A3PB20), 
PSBF_PROM2  (A8G2V9), PSBF_PROM3  (A2CCQ1), PSBF_PROM4  (A9BDU5), 
PSBF_PROM5  (A2BUS9), PSBF_PROM9  (Q31CN4), PSBF_PROMA  (Q7VDN9), 
PSBF_PROMM  (Q7V4Q1), PSBF_PROMP  (Q7V2Z9), PSBF_PROMS  (A2BP98), 
PSBF_PSINU  (Q8WI05), PSBF_RIPO1  (B7K625), PSBF_SACHY  (Q6L384), 
PSBF_SACOF  (Q6ENU8), PSBF_SAGLA  (Q7HIU1), PSBF_SARHE  (Q6EYP8), 
PSBF_SAUCE  (Q7J1A3), PSBF_SCHCH  (Q7HIT9), PSBF_SCIVE  (Q7HIT7), 
PSBF_SECCE  (P60127), PSBF_SISMO  (Q67HD3), PSBF_SOLBU  (Q2MIH1), 
PSBF_SOLLC  (Q3SC83), PSBF_SOLTU  (Q2VEG2), PSBF_SORBI  (A1E9U0), 
PSBF_SOYBN  (Q2PMR8), PSBF_SPAWA  (Q7HIT5), PSBF_SPIOL  (P60128), 
PSBF_STAER  (Q71L52), PSBF_STAPU  (Q32RX6), PSBF_STEPS  (Q6EYP2), 
PSBF_STIHE  (Q06SC5), PSBF_SYNE7  (Q8KPP2), PSBF_SYNJA  (Q2JS35), 
PSBF_SYNJB  (Q2JLE9), PSBF_SYNP6  (Q5N555), PSBF_SYNS9  (Q3B0C7), 
PSBF_SYNSC  (Q3AN57), PSBF_SYNY3  (P09191), PSBF_TAXBR  (Q6EYN1), 
PSBF_TETOB  (Q1KVX3), PSBF_THAPS  (A0T0U1), PSBF_THEVB  (Q8DIN9), 
PSBF_THEVL  (P12239), PSBF_THUPL  (Q6EYM7), PSBF_TOBAC  (P60124), 
PSBF_TRICV  (P49474), PSBF_TRIEI  (Q10YS9), PSBF_TRIV2  (Q3MC10), 
PSBF_TROAR  (Q7J1A2), PSBF_TUPAK  (Q3ZJ21), PSBF_TYPAN  (Q67HJ7), 
PSBF_VITVI  (Q0ZJ04), PSBF_WELMI  (Q6YLT4), PSBF_WHEAT  (P60125), 
PSBF_YUCGL  (Q67H85), PSBF_ZAMFU  (Q7IW43), PSBF_ZYGCR  (Q32RJ6)
» more

UniProtKB/Swiss-Prot
False negative sequences
19 sequences

PSBE_GLOVI  (Q7NMB0), PSBE_PARMW  (Q7U9P9), PSBE_PROM0  (A3PB19), 
PSBE_PROM1  (A2C0D1), PSBE_PROM2  (A8G2V8), PSBE_PROM3  (A2CCQ0), 
PSBE_PROM4  (A9BDU4), PSBE_PROM5  (A2BUS8), PSBE_PROM9  (Q31CN5), 
PSBE_PROMA  (Q7VDP0), PSBE_PROMM  (Q7V4Q2), PSBE_PROMP  (Q7V300), 
PSBE_PROMS  (A2BP97), PSBE_PROMT  (Q46H81), PSBE_SYNPW  (A5GIB0), 
PSBE_SYNR3  (A5GQF4), PSBE_SYNS3  (Q0IDJ7), PSBE_SYNS9  (Q3B0C6), 
PSBE_SYNSC  (Q3AN56)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PSBF_CAPAN  (Q03367)

		
PDB
[Detailed view]
127 PDB

1IZL; 1S5L; 1W5C; 2AXT; 3A0B; 3A0H; 3JCU; 3KZI; 3WU2; 4FBY; 4IL6; 4IXQ; 4IXR; 4PBU; 4PJ0; 4RVY; 4TNH; 4TNI; 4TNJ; 4TNK; 4UB6; 4UB8; 4V62; 4V82; 4YUU; 5B5E; 5B66; 5E79; 5E7C; 5GTH; 5GTI; 5H2F; 5KAF; 5KAI; 5MDX; 5MX2; 5TIS; 5V2C; 5WS5; 5WS6; 5XNL; 5XNM; 5ZZN; 6DHE; 6DHF; 6DHG; 6DHH; 6DHO; 6DHP; 6JLJ; 6JLK; 6JLL; 6JLM; 6JLN; 6JLO; 6JLP; 6KAC; 6KAD; 6KAF; 6W1O; 6W1P; 6W1Q; 6W1R; 6W1T; 6W1U; 6W1V; 6WJ6; 6YP7; 7CJI; 7CJJ; 7COU; 7CZL; 7D1T; 7D1U; 7DXA; 7DXH; 7EDA; 7N8O; 7NHO; 7NHP; 7NHQ; 7OUI; 7RCV; 7RF1; 7RF2; 7RF3; 7RF4; 7RF5; 7RF6; 7RF7; 7RF8; 7YMI; 7YMM; 7YQ2; 7YQ7; 8AM5; 8ASL; 8BD3; 8EZ5; 8F4C; 8F4D; 8F4E; 8F4F; 8F4G; 8F4H; 8F4I; 8F4J; 8F4K; 8GN0; 8GN1; 8GN2; 8IR5; 8IR6; 8IR7; 8IR8; 8IR9; 8IRA; 8IRB; 8IRC; 8IRD; 8IRE; 8IRF; 8IRG; 8IRH; 8IRI; 8IWH; 8R2I
» more