PROSITE entry PS00538
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General information about the entry
Entry name [info] | CHEMOTAXIS_TRANSDUC_1 |
Accession [info] | PS00538 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-DEC-1991 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00465 |
Name and characterization of the entry
Description [info] | Bacterial chemotaxis sensory transducers signature. |
Pattern [info] |
R-T-E-[EQ]-Q-x(2)-[SA]-[LIVM]-x-[EQ]-T-A-A-S-M-E-Q-L-T-A-T-V. |
Numerical results [info]
Total number of hits | 8 in 8 different sequences |
Number of true positive hits | 8 in 8 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 60 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 11.76 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | methylation at position 4 |
Site [info] | methylation at position 10 |
Site [info] | methylation at position 17 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
8 sequences
MCP1_ECOLI (P02942), MCP2_ECOLI (P07017), MCP2_SALTY (P02941), MCP3_ECOLI (P05704), MCP4_ECOLI (P07018), MCPC_SALTY (Q02755), MCPD_KLEAK (P21823), MCPS_KLEAK (P21822)» more
|
UniProtKB/Swiss-Prot False negative sequences |
60 sequences
AER_PSEAE (Q9I3F6), ALKN_ALCBS (Q0VTI9), ALKN_PSEOL (Q9R9U8), BAST_HALS3 (B0R6I4), BDLA_PSEAE (Q9I3S1), CAR_HALS3 (B0R9Z1), COST_HALS3 (B0R6A7), COST_HALSA (Q9HP84), CTPH_PSEAE (G3XDA3), CTPL_PSEAE (Q9HUW6), CTPM_PSEAE (Q9I0I6), HLYB_VIBCH (P15492), HTR13_HALS3 (B0R4N9), HTR18_HALS3 (B0R474), HTR1_HALS3 (B0R632), HTR1_HALSA (P0DMI3), HTR2_HALS3 (B0R6B1), HTR2_HALSA (Q9HP81), HTR4_HALS3 (B0R470), HTR4_HALSA (P0DMI4), HTR6_HALS3 (B0R461), HTR7_HALS3 (B0R6A6), HTR7_HALSA (P0DMI5), HTR8_HALS3 (B0R5T0), MCP10_MAGSA (Q2W8M7), MCP1_THEMA (Q9WYR0), MCP25_MAGSA (Q2W4T8), MCP2_THEMA (Q9X0M7), MCP3_THEMA (Q9X0N0), MCPA_BACSU (P39214), MCPA_PSEAE (Q9I6V2), MCPA_PSEPK (Q88KP1), MCPB_BACSU (P39215), MCPB_PSEAE (Q9I6V6), MCPC_BACSU (P54576), MCPG_PSEPK (Q88N45), MCPH_PSEPK (Q88R14), MCPK_PSEAE (Q9HUB1), MCPN_PSEAE (Q9I055), MCPP_PSEPK (Q88IY8), MCPQ_PSEPK (Q88D09), MCPS_PSEPK (Q88E10), MCPU_PSEPK (Q88NI1), MPCT_HALS3 (B0R367), NAHY_PSEPU (Q9Z429), PCAY_PSEP1 (A5W2C8), PCAY_PSEPK (Q88JK6), PCTA_PSEAE (G3XD24), PCTB_PSEAE (Q9HW91), PCTC_PSEAE (Q9HW93), PSCA_PSESM (Q882Z2), TLPA_BACSU (P39216), TLPB_BACSU (P39217), TLPC_BACSU (P39209), TLPQ_PSEAE (Q9I0I4), Y355_BACHK (Q6HP15), Y469_BACHK (Q6HNQ4), YFMS_BACSU (O06477), YOAH_BACSU (C0SP89), YVAQ_BACSU (O32239)» more |
PDB [Detailed view] |
3 PDB
1QU7; 3ZX6; 6S1K |