PROSITE entry PS00540
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General information about the entry
| Entry name [info] | FERRITIN_1 |
| Accession [info] | PS00540 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-JUN-1992 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00181 |
Name and characterization of the entry
| Description [info] | Ferritin iron-binding regions signature 1. |
| Pattern [info] |
E-x-[KR]-E-x(2)-E-[KR]-[LF]-[LIVMA]-x(2)-Q-N-x-R-x-G-R. |
Numerical results [info]
| Total number of hits | 44 in 44 different sequences |
| Number of true positive hits | 44 in 44 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 24 |
| Number of 'partial' sequences | 4 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 64.71 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | metal(?) at position 1 |
| Site [info] | metal(?) at position 4 |
| Site [info] | metal(?) at position 6 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
44 sequences
FRI1_BRANA (Q96540 ), FRI1_LITCT (P07229 ), FRI1_MAIZE (P29036 ), FRI1_PEA (P19975 ), FRI1_SOYBN (P19976 ), FRI1_TOBAC (Q8RX97 ), FRI2_LITCT (P07798 ), FRI2_MAIZE (P29390 ), FRI3_LITCT (P07797 ), FRI3_VIGUN (O65100 ), FRI4_ARATH (Q9S756 ), FRIH2_SCHMA (P25320 ), FRIH3_XENLA (Q7SXA6 ), FRIHA_XENLA (P49948 ), FRIHB_XENLA (P17663 ), FRIH_BOVIN (O46414 ), FRIH_CANLF (Q95MP7 ), FRIH_CHICK (P08267 ), FRIH_CRIGR (P29389 ), FRIH_FELCA (Q2MHN2 ), FRIH_HORSE (Q8MIP0 ), FRIH_HUMAN (P02794 ), FRIH_MOUSE (P09528 ), FRIH_PONAB (Q5R8J7 ), FRIH_RABIT (P25915 ), FRIH_RAT (P19132 ), FRIH_SALSA (P49946 ), FRIH_TREBE (P85838 ), FRIH_TRENE (P85837 ), FRIH_TRIVU (Q9XT73 ), FRIL1_MOUSE (P29391 ), FRIL1_RAT (P02793 ), FRIL2_MOUSE (P49945 ), FRIL_BOVIN (O46415 ), FRIL_CANLF (Q53VB8 ), FRIL_FELCA (Q2MHN1 ), FRIL_HORSE (P02791 ), FRIL_HUMAN (P02792 ), FRIL_PONAB (Q5R538 ), FRIL_RABIT (P09451 ), FRIS_LYMST (P42577 ), FRI_MALBX (Q94FY2 ), FRI_PHAVU (P25699 ), FTMT_MOUSE (Q9D5H4 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
24 sequences
FH17E_MOUSE (Q99MX2 ), FHL17_HUMAN (Q9BXU8 ), FHL19_HUMAN (P0C7X4 ), FRI1_ARATH (Q39101 ), FRI2_ARATH (Q9SRL5 ), FRI2_SOYBN (Q94IC4 ), FRI2_TOBAC (Q8H1T3 ), FRI2_VIGUN (Q41709 ), FRI3_ARATH (Q9LYN2 ), FRI3_SOYBN (Q948P6 ), FRI4_SOYBN (Q948P5 ), FRIH1_SCHMA (P25319 ), FRIH_ECHGR (O46119 ), FRIH_PIG (P19130 ), FRIH_SHEEP (P18685 ), FRIL_XENLA (Q7SXA5 ), FRIML_TREBE (P85836 ), FRIMS_TREBE (P85839 ), FRIM_TRENE (P85835 ), FRIY_LYMST (P42578 ), FRI_AEDAE (P41822 ), FRI_PACLE (Q26061 ), FTMT_BOVIN (Q2YDI9 ), FTMT_HUMAN (Q8N4E7 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
FRI2_PEA (P83445 ), FRIH_ANAPL (P80145 ), FRIL_PIG (P19133 ), FRIL_SHEEP (P18686 )» more |
| PDB [Detailed view] |
239 PDB
1AEW; 1BG7; 1DAT; 1FHA; 1GWG; 1H96; 1HRS; 1IER; 1IES; 1LB3; 1MFR; 1RCD; 1RCG; 1RCI; 1XZ1; 1XZ3; 2CEI; 2CHI; 2CIH; 2CLU; 2CN6; 2CN7; 2FFX; 2FG4; 2FG8; 2FHA; 2G4H; 2GYD; 2IU2; 2V2I; 2V2J; 2W0O; 2Z5P; 2Z5Q; 2Z5R; 2ZA6; 2ZA7; 2ZA8; 2ZG7; 2ZG8; 2ZG9; 2ZUR; 3AF7; 3AF8; 3AF9; 3AJO; 3AJP; 3AJQ; 3F32; 3F33; 3F34; 3F35; 3F36; 3F37; 3F38; 3F39; 3FI6; 3H7G; 3KA3; 3KA4; 3KA6; 3KA8; 3KA9; 3KXU; 3NOZ; 3NP0; 3NP2; 3O7R; 3O7S; 3RAV; 3RBC; 3RD0; 3RE7; 3RGD; 3SH6; 3SHX; 3U90; 3WNW; 3WVU; 3WVV; 3WVW; 4DAS; 4DE6; 4LPJ; 4LPM; 4LPN; 4LQH; 4LQJ; 4LQV; 4LYU; 4LYX; 4MJY; 4MKU; 4ML5; 4MN9; 4MY7; 4OYN; 4P18; 4V1W; 4V6B; 4Y08; 4YKH; 4Z3B; 4ZJK; 5AXS; 5CMQ; 5CMR; 5CZU; 5E1U; 5E2D; 5ERJ; 5ERK; 5GN8; 5GOU; 5GU0; 5GU1; 5GU2; 5GU3; 5HQO; 5IX6; 5JKK; 5JKL; 5JKM; 5LG2; 5LG8; 5MIJ; 5MIK; 5N26; 5N27; 5OBA; 5OBB; 5UP7; 5UP8; 5UP9; 5VTD; 5XB1; 5XHI; 5XHM; 5XHN; 5XHO; 5YI5; 5ZND; 6B8F; 6B8G; 6ENV; 6ENW; 6FTV; 6FX8; 6FX9; 6GSR; 6GXJ; 6H5I; 6H6T; 6H6U; 6HJT; 6HJU; 6I36; 6I9P; 6I9T; 6IAF; 6IAJ; 6IPC; 6IPO; 6IPP; 6IPQ; 6J4A; 6J7G; 6JEE; 6JEF; 6JOB; 6JPS; 6KE2; 6KE4; 6M52; 6M54; 6MSX; 6PXM; 6RA8; 6RJH; 6S61; 6SHT; 6TRZ; 6TSA; 6TSF; 6TSJ; 6TSS; 6TSX; 6V21; 6WX6; 6WYF; 6WYG; 6WYH; 6Z3D; 6Z6U; 6Z9E; 6Z9F; 6ZH5; 6ZLG; 6ZLQ; 7A4M; 7A6A; 7A6B; 7BD7; 7CK8; 7CK9; 7EML; 7EMM; 7JGK; 7JGL; 7JGM; 7JGN; 7JGO; 7JGP; 7JGQ; 7K26; 7K3V; 7K3W; 7KE3; 7KE5; 7KOD; 7PF1; 7R5O; 7RRP; 7RYW; 7RZN; 7RZX; 7TB3; 7TBH; 7V66; 7VD8; 7VIO; 7VIP; 7VIQ; 7VIR; 7VIS; 7VIT; 7VIU; 7W7J; 8DNP » more |