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PROSITE entry PS00540


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General information about the entry

Entry name [info] FERRITIN_1
Accession [info] PS00540
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-JUN-1992 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00181

Name and characterization of the entry

Description [info] Ferritin iron-binding regions signature 1.
Pattern [info] 
E-x-[KR]-E-x(2)-E-[KR]-[LF]-[LIVMA]-x(2)-Q-N-x-R-x-G-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 26
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 62.86 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] metal(?) at position 1
Site [info] metal(?) at position 4
Site [info] metal(?) at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 44 sequences 

FRI1_BRANA  (Q96540), FRI1_LITCT  (P07229), FRI1_MAIZE  (P29036), 

FRI1_PEA(P19975), FRI1_SOYBN  (P19976), FRI1_TOBAC  (Q8RX97), 
FRI2_LITCT  (P07798), FRI2_MAIZE  (P29390), FRI3_LITCT  (P07797), 
FRI3_VIGUN  (O65100), FRI4_ARATH  (Q9S756), FRIH2_SCHMA (P25320), 
FRIH3_XENLA (Q7SXA6), FRIHA_XENLA (P49948), FRIHB_XENLA (P17663), 
FRIH_BOVIN  (O46414), FRIH_CANLF  (Q95MP7), FRIH_CHICK  (P08267), 
FRIH_CRIGR  (P29389), FRIH_FELCA  (Q2MHN2), FRIH_HORSE  (Q8MIP0), 
FRIH_HUMAN  (P02794), FRIH_MOUSE  (P09528), FRIH_PONAB  (Q5R8J7), 
FRIH_RABIT  (P25915), FRIH_RAT(P19132), FRIH_SALSA  (P49946), 
FRIH_TREBE  (P85838), FRIH_TRENE  (P85837), FRIH_TRIVU  (Q9XT73), 
FRIL1_MOUSE (P29391), FRIL1_RAT   (P02793), FRIL2_MOUSE (P49945), 
FRIL_BOVIN  (O46415), FRIL_CANLF  (Q53VB8), FRIL_FELCA  (Q2MHN1), 
FRIL_HORSE  (P02791), FRIL_HUMAN  (P02792), FRIL_PONAB  (Q5R538), 
FRIL_RABIT  (P09451), FRIS_LYMST  (P42577), FRI_MALBX   (Q94FY2), 
FRI_PHAVU   (P25699), FTMT_MOUSE  (Q9D5H4)
» more

UniProtKB/Swiss-Prot
False negative sequences		 26 sequences 

FH17E_MOUSE (Q99MX2), FHL17_HUMAN (Q9BXU8), FHL19_HUMAN (P0C7X4), 

FRI1_ARATH  (Q39101), FRI2_ARATH  (Q9SRL5), FRI2_SOYBN  (Q94IC4), 
FRI2_TOBAC  (Q8H1T3), FRI2_VIGUN  (Q41709), FRI3_ARATH  (Q9LYN2), 
FRI3_SOYBN  (Q948P6), FRI4_SOYBN  (Q948P5), FRIH1_SCHMA (P25319), 
FRIH_AEDAE  (P41822), FRIH_ANAPL  (P80145), FRIH_ECHGR  (O46119), 
FRIH_PAPXU  (I4DJ24), FRIH_PIG(P19130), FRIH_SHEEP  (P18685), 
FRIL_XENLA  (Q7SXA5), FRIML_TREBE (P85836), FRIMS_TREBE (P85839), 
FRIM_TRENE  (P85835), FRIY_LYMST  (P42578), FRI_PACLE   (Q26061), 
FTMT_BOVIN  (Q2YDI9), FTMT_HUMAN  (Q8N4E7)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 3 sequences 

FRI2_PEA(P83445), FRIL_PIG(P19133), FRIL_SHEEP  (P18686)


				
	

	

		PDB
[Detailed view]		
		
			273 PDB
			


			1AEW; 1BG7; 1DAT; 1FHA; 1GWG; 1H96; 1HRS; 1IER; 1IES; 1LB3; 1MFR; 1RCD; 
			
				1RCG; 1RCI; 1XZ1; 1XZ3; 2CEI; 2CHI; 2CIH; 2CLU; 2CN6; 2CN7; 2FFX; 2FG4; 
				2FG8; 2FHA; 2G4H; 2GYD; 2IU2; 2V2I; 2V2J; 2W0O; 2Z5P; 2Z5Q; 2Z5R; 2ZA6; 
				2ZA7; 2ZA8; 2ZG7; 2ZG8; 2ZG9; 2ZUR; 3AF7; 3AF8; 3AF9; 3AJO; 3AJP; 3AJQ; 
				3F32; 3F33; 3F34; 3F35; 3F36; 3F37; 3F38; 3F39; 3FI6; 3H7G; 3KA3; 3KA4; 
				3KA6; 3KA8; 3KA9; 3KXU; 3NOZ; 3NP0; 3NP2; 3O7R; 3O7S; 3RAV; 3RBC; 3RD0; 
				3RE7; 3RGD; 3SH6; 3SHX; 3U90; 3WNW; 3WVU; 3WVV; 3WVW; 4DAS; 4DE6; 4LPJ; 
				4LPM; 4LPN; 4LQH; 4LQJ; 4LQV; 4LYU; 4LYX; 4MJY; 4MKU; 4ML5; 4MN9; 4MY7; 
				4OYN; 4P18; 4V1W; 4V6B; 4Y08; 4YKH; 4Z3B; 4ZJK; 5AXS; 5CMQ; 5CMR; 5CZU; 
				5E1U; 5E2D; 5ERJ; 5ERK; 5GN8; 5GOU; 5GU0; 5GU1; 5GU2; 5GU3; 5HQO; 5IX6; 
				5JKK; 5JKL; 5JKM; 5LG2; 5LG8; 5MIJ; 5MIK; 5N26; 5N27; 5OBA; 5OBB; 5UP7; 
				5UP8; 5UP9; 5VTD; 5XB1; 5XHI; 5XHM; 5XHN; 5XHO; 5YI5; 5ZND; 6B8F; 6B8G; 
				6ENV; 6ENW; 6FTV; 6FX8; 6FX9; 6GSR; 6GXJ; 6H5I; 6H6T; 6H6U; 6HJT; 6HJU; 
				6I36; 6I9P; 6I9T; 6IAF; 6IAJ; 6IPC; 6IPO; 6IPP; 6IPQ; 6J4A; 6J7G; 6JEE; 
				6JEF; 6JOB; 6JPS; 6KE2; 6KE4; 6M52; 6M54; 6MSX; 6PXM; 6RA8; 6RJH; 6S61; 
				6SHT; 6TRZ; 6TSA; 6TSF; 6TSJ; 6TSS; 6TSX; 6V21; 6WX6; 6WYF; 6WYG; 6WYH; 
				6Z3D; 6Z6U; 6Z9E; 6Z9F; 6ZH5; 6ZLG; 6ZLQ; 7A4M; 7A6A; 7A6B; 7BD7; 7CK8; 
				7CK9; 7EML; 7EMM; 7JGK; 7JGL; 7JGM; 7JGN; 7JGO; 7JGP; 7JGQ; 7K26; 7K3V; 
				7K3W; 7KE3; 7KE5; 7KOD; 7PF1; 7R5O; 7RRP; 7RYW; 7RZN; 7RZX; 7TB3; 7TBH; 
				7U5L; 7V66; 7VD8; 7VIO; 7VIP; 7VIQ; 7VIR; 7VIS; 7VIT; 7VIU; 7W7J; 7ZG7; 
				8A2L; 8A2M; 8A5N; 8B7L; 8B7O; 8CPM; 8CPS; 8CPT; 8CPU; 8CPV; 8CPW; 8CPX; 
				8DHX; 8DNP; 8EMQ; 8EN7; 8F49; 8HHS; 8I6L; 8I77; 8I81; 8I8Q; 8I8U; 8J0U; 
				8J0V; 8J0W; 8J0X; 8J0Y; 8J0Z; 8J10; 8J11; 8J16; 8J5A
			
			

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