PROSITE logo

PROSITE entry PS00540


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] FERRITIN_1
Accession [info] PS00540
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-JUN-1992 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00181

Name and characterization of the entry

Description [info] Ferritin iron-binding regions signature 1.
Pattern [info] 
E-x-[KR]-E-x(2)-E-[KR]-[LF]-[LIVMA]-x(2)-Q-N-x-R-x-G-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 26
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 62.86 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] metal(?) at position 1
Site [info] metal(?) at position 4
Site [info] metal(?) at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 44 sequences 

FRI1_AQUCT  (P07229), FRI1_BRANA  (Q96540), FRI1_MAIZE  (P29036), 

FRI1_PEA(P19975), FRI1_SOYBN  (P19976), FRI1_TOBAC  (Q8RX97), 
FRI2_AQUCT  (P07798), FRI2_MAIZE  (P29390), FRI3_AQUCT  (P07797), 
FRI3_VIGUN  (O65100), FRI4_ARATH  (Q9S756), FRIH2_SCHMA (P25320), 
FRIH3_XENLA (Q7SXA6), FRIHA_XENLA (P49948), FRIHB_XENLA (P17663), 
FRIH_BOVIN  (O46414), FRIH_CANLF  (Q95MP7), FRIH_CHICK  (P08267), 
FRIH_CRIGR  (P29389), FRIH_FELCA  (Q2MHN2), FRIH_HORSE  (Q8MIP0), 
FRIH_HUMAN  (P02794), FRIH_MOUSE  (P09528), FRIH_PONAB  (Q5R8J7), 
FRIH_RABIT  (P25915), FRIH_RAT(P19132), FRIH_SALSA  (P49946), 
FRIH_TREBE  (P85838), FRIH_TRENE  (P85837), FRIH_TRIVU  (Q9XT73), 
FRIL1_MOUSE (P29391), FRIL1_RAT   (P02793), FRIL2_MOUSE (P49945), 
FRIL_BOVIN  (O46415), FRIL_CANLF  (Q53VB8), FRIL_FELCA  (Q2MHN1), 
FRIL_HORSE  (P02791), FRIL_HUMAN  (P02792), FRIL_PONAB  (Q5R538), 
FRIL_RABIT  (P09451), FRIS_LYMST  (P42577), FRI_MALBX   (Q94FY2), 
FRI_PHAVU   (P25699), FTMT_MOUSE  (Q9D5H4)
» more

UniProtKB/Swiss-Prot
False negative sequences		 26 sequences 

FH17E_MOUSE (Q99MX2), FHL17_HUMAN (Q9BXU8), FHL19_HUMAN (P0C7X4), 

FRI1_ARATH  (Q39101), FRI2_ARATH  (Q9SRL5), FRI2_SOYBN  (Q94IC4), 
FRI2_TOBAC  (Q8H1T3), FRI2_VIGUN  (Q41709), FRI3_ARATH  (Q9LYN2), 
FRI3_SOYBN  (Q948P6), FRI4_SOYBN  (Q948P5), FRIH1_SCHMA (P25319), 
FRIH_AEDAE  (P41822), FRIH_ANAPL  (P80145), FRIH_ECHGR  (O46119), 
FRIH_PAPXU  (I4DJ24), FRIH_PIG(P19130), FRIH_SHEEP  (P18685), 
FRIL_XENLA  (Q7SXA5), FRIML_TREBE (P85836), FRIMS_TREBE (P85839), 
FRIM_TRENE  (P85835), FRIY_LYMST  (P42578), FRI_PACLE   (Q26061), 
FTMT_BOVIN  (Q2YDI9), FTMT_HUMAN  (Q8N4E7)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 3 sequences 

FRI2_PEA(P83445), FRIL_PIG(P19133), FRIL_SHEEP  (P18686)


				
	

	

		PDB
[Detailed view]		
		
			285 PDB
			


			1AEW; 1BG7; 1DAT; 1FHA; 1GWG; 1H96; 1HRS; 1IER; 1IES; 1LB3; 1MFR; 1RCD; 
			
				1RCG; 1RCI; 1XZ1; 1XZ3; 2CEI; 2CHI; 2CIH; 2CLU; 2CN6; 2CN7; 2FFX; 2FG4; 
				2FG8; 2FHA; 2G4H; 2GYD; 2IU2; 2V2I; 2V2J; 2W0O; 2Z5P; 2Z5Q; 2Z5R; 2ZA6; 
				2ZA7; 2ZA8; 2ZG7; 2ZG8; 2ZG9; 2ZUR; 3AF7; 3AF8; 3AF9; 3AJO; 3AJP; 3AJQ; 
				3F32; 3F33; 3F34; 3F35; 3F36; 3F37; 3F38; 3F39; 3FI6; 3H7G; 3KA3; 3KA4; 
				3KA6; 3KA8; 3KA9; 3KXU; 3NOZ; 3NP0; 3NP2; 3O7R; 3O7S; 3RAV; 3RBC; 3RD0; 
				3RE7; 3RGD; 3SH6; 3SHX; 3U90; 3WNW; 3WVU; 3WVV; 3WVW; 4DAS; 4DE6; 4LPJ; 
				4LPM; 4LPN; 4LQH; 4LQJ; 4LQV; 4LYU; 4LYX; 4MJY; 4MKU; 4ML5; 4MN9; 4MY7; 
				4OYN; 4P18; 4V1W; 4V6B; 4Y08; 4YKH; 4Z3B; 4ZJK; 5AXS; 5CMQ; 5CMR; 5CZU; 
				5E1U; 5E2D; 5ERJ; 5ERK; 5GN8; 5GOU; 5GU0; 5GU1; 5GU2; 5GU3; 5HQO; 5IX6; 
				5JKK; 5JKL; 5JKM; 5LG2; 5LG8; 5MIJ; 5MIK; 5N26; 5N27; 5OBA; 5OBB; 5UP7; 
				5UP8; 5UP9; 5VTD; 5XB1; 5XHI; 5XHM; 5XHN; 5XHO; 5YI5; 5ZND; 6B8F; 6B8G; 
				6ENV; 6ENW; 6FTV; 6FX8; 6FX9; 6GSR; 6GXJ; 6H5I; 6H6T; 6H6U; 6HJT; 6HJU; 
				6I36; 6I9P; 6I9T; 6IAF; 6IAJ; 6IPC; 6IPO; 6IPP; 6IPQ; 6J4A; 6J7G; 6JEE; 
				6JEF; 6JOB; 6JPS; 6KE2; 6KE4; 6M52; 6M54; 6MSX; 6PXM; 6RA8; 6RJH; 6S61; 
				6SHT; 6TRZ; 6TSA; 6TSF; 6TSJ; 6TSS; 6TSX; 6V21; 6WX6; 6WYF; 6WYG; 6WYH; 
				6Z3D; 6Z6U; 6Z9E; 6Z9F; 6ZH5; 6ZLG; 6ZLQ; 7A4M; 7A6A; 7A6B; 7BD7; 7CK8; 
				7CK9; 7EML; 7EMM; 7JGK; 7JGL; 7JGM; 7JGN; 7JGO; 7JGP; 7JGQ; 7K26; 7K3V; 
				7K3W; 7KE3; 7KE5; 7KOD; 7PF1; 7R5O; 7RRP; 7RYW; 7RZN; 7RZX; 7TB3; 7TBH; 
				7U5L; 7V66; 7VD8; 7VIO; 7VIP; 7VIQ; 7VIR; 7VIS; 7VIT; 7VIU; 7W7J; 7ZG7; 
				8A2L; 8A2M; 8A5N; 8B7L; 8B7O; 8BK9; 8BKA; 8BKB; 8CPM; 8CPS; 8CPT; 8CPU; 
				8CPV; 8CPW; 8CPX; 8DHX; 8DNP; 8EMQ; 8EN7; 8F49; 8HHS; 8I6L; 8I77; 8I81; 
				8I8Q; 8I8U; 8J0U; 8J0V; 8J0W; 8J0X; 8J0Y; 8J0Z; 8J10; 8J11; 8J16; 8J5A; 
				8J9L; 8J9M; 8JAI; 8KH2; 8PP2; 8PP3; 8PP5; 8PVC; 8RQB
			
			

			» more