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Entry: PS00555

General information about the entry

Entry name [info] ICOSAH_VIR_COAT_S
Accession [info] PS00555
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-NOV-1997 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00480

Name and characterization of the entry

Description [info] Plant viruses icosahedral capsid proteins 'S' region signature.
Pattern [info] 
[FYW]-x-[PSTA]-x(7)-G-x-[LIVM]-x-[LIVM]-x-[FYWI]-x(2)-D-x(5)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.44 %
Recall (true positives / (true positives + false negatives)) 94.44 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 17 sequences 

CAPSD_AMCV  (P14836    ), CAPSD_CARMS (Q9Q6X7    ), CAPSD_CARMV (P04383    ), 

CAPSD_CFMVN (Q66012    ), CAPSD_CNV   (P15183    ), CAPSD_CRV   (P17456    ), 
CAPSD_MCMVK (P11642    ), CAPSD_MNSV  (P19899    ), CAPSD_POLVP (Q9QBU3    ), 
CAPSD_RCNMV (P22955    ), CAPSD_SBMVA (O72158    ), CAPSD_SCPMV (P03607    ), 
CAPSD_TBSVB (P11795    ), CAPSD_TBSVC (P11689    ), CAPSD_TCV   (P06663    ), 
CAPSD_TNVA  (P22959    ), CAPSD_TNVD  (P27210    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

CAPSD_PNLV  (Q5NDM8    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
TCTP2_DICDI (Q54RX1    )


				
	

	

		PDB
[Detailed view]		
		
			9 PDB
			


			1OPO; 2TBV; 2ZAH; 3ZX8; 3ZX9; 3ZXA; 4LLF; 4SBV; 6MRM
				
	





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