PROSITE entry PS00559
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General information about the entry
| Entry name [info] | MOLYBDOPTERIN_EUK |
| Accession [info] | PS00559 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00484 |
Name and characterization of the entry
| Description [info] | Eukaryotic molybdopterin oxidoreductases signature. |
| Pattern [info] |
[GA]-{A}-x(2)-[KRNQHT]-x(11,14)-[LIVMFYWS]-x(3)-{V}-{GK}-x(3)-[LIVMF]-x-
C-x(2)-[DEN]-R-x(2)-[DE].
|
Numerical results [info]
| Total number of hits | 63 in 63 different sequences |
| Number of true positive hits | 54 in 54 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 9 in 9 different sequences |
| Number of false negative sequences | 21 |
| Number of 'partial' sequences | 4 |
| Precision (true positives / (true positives + false positives)) | 85.71 % |
| Recall (true positives / (true positives + false negatives)) | 72.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
54 sequences
AOXA_BOVIN (P48034 ), AOXA_CAVPO (H9TB17 ), AOXA_HUMAN (Q06278 ), AOXA_MACFA (Q5FB27 ), AOXA_MOUSE (O54754 ), AOXA_RABIT (P80456 ), AOXA_RAT (Q9Z0U5 ), NIA1_ARATH (P11832 ), NIA1_BRANA (P39867 ), NIA1_HORVU (P27967 ), NIA1_ORYSJ (P16081 ), NIA1_PHAVU (P39865 ), NIA1_SOYBN (P54233 ), NIA1_TOBAC (P11605 ), NIA2_ARATH (P11035 ), NIA2_BRANA (P39868 ), NIA2_HORVU (P27969 ), NIA2_PHAVU (P39866 ), NIA2_SOYBN (P39870 ), NIA2_TOBAC (P08509 ), NIA3_MAIZE (P49102 ), NIA7_HORVU (P27968 ), NIA_ASPNG (P36858 ), NIA_BEABA (P43100 ), NIA_BETPN (P27783 ), NIA_CICIN (P43101 ), NIA_CUCMA (P17569 ), NIA_EMENI (P22945 ), NIA_FUSOX (P39863 ), NIA_LEPMC (P36842 ), NIA_LOTJA (P39869 ), NIA_NEUCR (P08619 ), NIA_PETHY (P36859 ), NIA_PICAN (P49050 ), NIA_SOLLC (P17570 ), NIA_SPIOL (P23312 ), NIA_ULVPR (A0A286R227), NIA_USTMA (Q05531 ), NIA_VOLCA (P36841 ), SUOX_CHICK (P07850 ), SUOX_HUMAN (P51687 ), SUOX_MACFA (Q60HD0 ), SUOX_MOUSE (Q8R086 ), SUOX_RAT (Q07116 ), XDH_BOVIN (P80457 ), XDH_CALVI (P08793 ), XDH_CHICK (P47990 ), XDH_DROME (P10351 ), XDH_DROPS (P22811 ), XDH_DROSU (P91711 ), XDH_FELCA (Q9MYW6 ), XDH_HUMAN (P47989 ), XDH_MOUSE (Q00519 ), XDH_RAT (P22985 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
21 sequences
ALDO1_ARATH (Q7G193 ), ALDO2_ARATH (Q7G192 ), ALDO3_ARATH (Q7G9P4 ), ALDO4_ARATH (Q7G191 ), AOXB_CAVPO (H9TB19 ), AOXB_MACFA (C4NYZ3 ), AOXB_MOUSE (Q5SGK3 ), AOXB_RAT (Q5QE78 ), AOXC_MOUSE (G3X982 ), AOXC_RAT (Q5QE80 ), AOXD_CAVPO (H9TB18 ), AOXD_MOUSE (Q3TYQ9 ), AOXD_RAT (Q5QE79 ), NIA_PHYIN (P39864 ), SUOX_ARATH (Q9S850 ), SUOX_DROME (Q9VWP4 ), XDH1_ARATH (Q8GUQ8 ), XDH2_ARATH (F4JLI5 ), XDH_DICDI (Q54FB7 ), XDH_EMENI (Q12553 ), XDH_ORYSJ (Q6AUV1 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
NIA1_MAIZE (P17571 ), NIA2_MAIZE (P39871 ), NIA_CHLVU (Q01170 ), NIA_LOTTE (P39882 )» more |
| UniProtKB/Swiss-Prot False positive sequences |
9 sequences
B2L14_RAT (Q6AYK4 ), CAPSD_TOBSV (P03598 ), EPOR_CANLF (Q2KL21 ), GREB1_MOUSE (Q3UHK3 ), LKHA4_ARATH (Q9FY49 ), PCM1_HUMAN (Q15154 ), PIE_DROME (Q9VKW2 ), PKIA_EMENI (Q5B7U4 ), Y5900_ARATH (Q9FID8 )» more |
| PDB [Detailed view] |
49 PDB
1FIQ; 1FO4; 1N5X; 1V97; 1VDV; 1WYG; 2A9D; 2BIH; 2BII; 2CKJ; 2E1Q; 2E3T; 3AM9; 3AMZ; 3AN1; 3AX7; 3AX9; 3B9J; 3BDJ; 3ETR; 3EUB; 3NRZ; 3NS1; 3NVV; 3NVW; 3NVY; 3NVZ; 3SR6; 3UNA; 3UNC; 3UNI; 4UHW; 4UHX; 4YRW; 4YSW; 4YTY; 4YTZ; 5EPG; 6A7X; 6ABU; 6AC1; 6AC4; 6AD4; 6ADJ; 6AJU; 6Q6Q; 7D6O; 7OPN; 7ORC » more |