PROSITE entry PS00559
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General information about the entry
| Entry name [info] | MOLYBDOPTERIN_EUK |
| Accession [info] | PS00559 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00484 |
Name and characterization of the entry
| Description [info] | Eukaryotic molybdopterin oxidoreductases signature. |
| Pattern [info] |
[GA]-{A}-x(2)-[KRNQHT]-x(11,14)-[LIVMFYWS]-x(3)-{V}-{GK}-x(3)-[LIVMF]-x-
C-x(2)-[DEN]-R-x(2)-[DE].
|
Numerical results [info]
| Total number of hits | 63 in 63 different sequences |
| Number of true positive hits | 54 in 54 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 9 in 9 different sequences |
| Number of false negative sequences | 21 |
| Number of 'partial' sequences | 4 |
| Precision (true positives / (true positives + false positives)) | 85.71 % |
| Recall (true positives / (true positives + false negatives)) | 72.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
54 sequences
AOXA_BOVIN (P48034), AOXA_CAVPO (H9TB17), AOXA_HUMAN (Q06278), AOXA_MACFA (Q5FB27), AOXA_MOUSE (O54754), AOXA_RABIT (P80456), AOXA_RAT(Q9Z0U5), NIA1_ARATH (P11832), NIA1_BRANA (P39867), NIA1_HORVU (P27967), NIA1_ORYSJ (P16081), NIA1_PHAVU (P39865), NIA1_SOYBN (P54233), NIA1_TOBAC (P11605), NIA2_ARATH (P11035), NIA2_BRANA (P39868), NIA2_HORVU (P27969), NIA2_PHAVU (P39866), NIA2_SOYBN (P39870), NIA2_TOBAC (P08509), NIA3_MAIZE (P49102), NIA7_HORVU (P27968), NIA_ASPNG (P36858), NIA_BEABA (P43100), NIA_BETPN (P27783), NIA_CICIN (P43101), NIA_CUCMA (P17569), NIA_EMENI (P22945), NIA_FUSOX (P39863), NIA_LEPMC (P36842), NIA_LOTJA (P39869), NIA_NEUCR (P08619), NIA_PETHY (P36859), NIA_PICAN (P49050), NIA_SOLLC (P17570), NIA_SPIOL (P23312), NIA_ULVPR (A0A286R227), NIA_USTMA (Q05531), NIA_VOLCA (P36841), SUOX_CHICK (P07850), SUOX_HUMAN (P51687), SUOX_MACFA (Q60HD0), SUOX_MOUSE (Q8R086), SUOX_RAT(Q07116), XDH_BOVIN (P80457), XDH_CALVI (P08793), XDH_CHICK (P47990), XDH_DROME (P10351), XDH_DROPS (P22811), XDH_DROSU (P91711), XDH_FELCA (Q9MYW6), XDH_HUMAN (P47989), XDH_MOUSE (Q00519), XDH_RAT (P22985)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
21 sequences
ALDO1_ARATH (Q7G193), ALDO2_ARATH (Q7G192), ALDO3_ARATH (Q7G9P4), ALDO4_ARATH (Q7G191), AOXB_CAVPO (H9TB19), AOXB_MACFA (C4NYZ3), AOXB_MOUSE (Q5SGK3), AOXB_RAT(Q5QE78), AOXC_MOUSE (G3X982), AOXC_RAT(Q5QE80), AOXD_CAVPO (H9TB18), AOXD_MOUSE (Q3TYQ9), AOXD_RAT(Q5QE79), NIA_PHYIN (P39864), SUOX_ARATH (Q9S850), SUOX_DROME (Q9VWP4), XDH1_ARATH (Q8GUQ8), XDH2_ARATH (F4JLI5), XDH_DICDI (Q54FB7), XDH_EMENI (Q12553), XDH_ORYSJ (Q6AUV1)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
NIA1_MAIZE (P17571), NIA2_MAIZE (P39871), NIA_CHLVU (Q01170), NIA_LOTTE (P39882)» more |
| UniProtKB/Swiss-Prot False positive sequences |
9 sequences
B2L14_RAT (Q6AYK4), CAPSD_TOBSV (P03598), EPOR_CANLF (Q2KL21), GREB1_MOUSE (Q3UHK3), LKHA4_ARATH (Q9FY49), PCM1_HUMAN (Q15154), PIE_DROME (Q9VKW2), PKIA_EMENI (Q5B7U4), Y5900_ARATH (Q9FID8)» more |
| PDB [Detailed view] |
50 PDB
1FIQ; 1FO4; 1N5X; 1V97; 1VDV; 1WYG; 2A9D; 2BIH; 2BII; 2CKJ; 2E1Q; 2E3T; 3AM9; 3AMZ; 3AN1; 3AX7; 3AX9; 3B9J; 3BDJ; 3ETR; 3EUB; 3NRZ; 3NS1; 3NVV; 3NVW; 3NVY; 3NVZ; 3SR6; 3UNA; 3UNC; 3UNI; 4UHW; 4UHX; 4YRW; 4YSW; 4YTY; 4YTZ; 5EPG; 6A7X; 6ABU; 6AC1; 6AC4; 6AD4; 6ADJ; 6AJU; 6Q6Q; 7OPN; 7ORC; 8EMT; 8J79 » more |