PROSITE entry PS00561

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General information about the entry

Entry name [info]	CBM2_A
Accession [info]	PS00561
Entry type [info]	PATTERN
Date [info]	01-DEC-1991 CREATED; 01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00485

Name and characterization of the entry

Description [info]	CBM2a (carbohydrate-binding type-2) domain signature.
Pattern [info]	W-N-[STAGR]-[STDN]-[LIVM]-x(2)-[GST]-x-[GST]-x(2)-[LIVMFT]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	19 in 19 different sequences
Number of true positive hits	18 in 18 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	94.74 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

18 sequences

CHIT_STRLI  (P36909), CHIT_STRPL  (P11220), GUN1_BUTFI  (P20847),

GUN2_THEFU  (P26222), GUN4_THEFU  (P26221), GUNA_CELFI  (P07984), 
GUNA_CELJU  (P10476), GUNA_STRLI  (P27035), GUNA_THEBI  (P26414), 
GUNB_CELFI  (P26225), GUNB_CELJU  (P18126), GUNC_CELJU  (P27033), 
GUXA_CELFA  (P50401), GUXB_CELFA  (P50899), GUX_CELFI   (P07986), 
XYNA_CELJU  (P14768), XYNB_CELJU  (P23030), XYNC_CELJU  (P23031)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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UniProtKB/Swiss-Prot
False positive sequences

1 sequence

BGLM_EMENI  (Q5AWD4)

PDB
[Detailed view]

3 PDB

1EXG; 1EXH; 6QFS