PROSITE logo

PROSITE entry PS00562


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] CBM1_1
Accession [info] PS00562
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00486

Name and characterization of the entry

Description [info] CBM1 (carbohydrate binding type-1) domain signature.
Pattern [info] 
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 120 in 116 different sequences
Number of true positive hits 120 in 116 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.17 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 9
Site [info] disulfide at position 16
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 116 sequences 

AA12_COPC7  (A8P0V4), AA12_COPCI  (A0A0A8IDB7), AB62A_PENPR (A0A977JPB5), 

AXE1_ASPFU  (Q4WBW4), AXE1_COPC7  (A8PB24), AXE1_HYPJE  (Q99034), 
AXE1_NEOFI  (A1DBP9), AXE1_TALPU  (Q8NJP6), CBHB_ASPAC  (O59843), 
CBHB_ASPCL  (A1CU44), CBHB_ASPFC  (B0Y8K2), CBHB_ASPFU  (Q4WM08), 
CBHB_ASPNC  (A2QAI7), CBHB_ASPNG  (Q9UVS8), CBHB_ASPTN  (Q0CMT2), 
CBHB_EMENI  (Q8NK02), CBHB_NEOFI  (A1DNL0), CBHC_ASPCL  (A1CCN4), 
CBHC_ASPFC  (B0XWL3), CBHC_ASPFU  (Q4WFK4), CBHC_ASPNC  (A2QYR9), 
CBHC_ASPTN  (Q0CFP1), CBHC_EMENI  (Q5B2E8), CBHC_NEOFI  (A1DJQ7), 
CE12C_PYRO7 (G4NBX2), CEL6A_PODAN (B2ABX7), CEL6A_PYRO7 (G4MM92), 
CEL7A_THET4 (G2QCS4), CUTI1_VERDA (A0A2J8C362), EG5A_PHACH  (Q66NB7), 
FAEB_TALFU  (Q9HE18), FAEB_TALSN  (B8M9H9), GCE1_PHACR  (P0CT87), 
GCE1_PODAN  (B2ABS0), GCE1_SODAL  (A0A1D8EJG8), GCE_CERUI   (A0A0A7EQR3), 
GCE_HYPJQ   (G0RV93), GH6D_PODAN  (B2ADA5), GUN1_HYPJE  (P07981), 
GUN1_HYPJR  (A0A024SNB7), GUN1_TRILO  (Q12714), GUN2_HYPJE  (P07982), 
GUN2_HYPJR  (A0A024SH20), GUN3_HUMIN  (Q12624), GUN3_NEUCR  (Q7SDR1), 
GUN5_HYPJE  (P43317), GUNB_FUSOX  (P46236), GUNF_FUSOX  (P46239), 
GUNK_FUSOX  (P45699), GUX1A_NEUCR (Q7SA23), GUX1B_NEUCR (P38676), 
GUX1_HUMGT  (P15828), GUX1_HYPJE  (P62694), GUX1_HYPJR  (A0A024RXP8), 
GUX1_HYPRU  (P19355), GUX1_PENJA  (Q06886), GUX1_PHACH  (P13860), 
GUX1_TRIHA  (Q9P8P3), GUX1_TRIKO  (P62695), GUX2_AGABI  (Q92400), 
GUX2_HYPJE  (P07987), GUX2_HYPJR  (A0A024SH76), GUX3_AGABI  (P49075), 
GUX6_HUMIN  (Q9C1S9), GUXC_FUSOX  (P46238), LP9A_ASPCL  (A1C4H2), 
LP9A_ASPFC  (B0Y9G4), LP9A_ASPFN  (B8MXJ7), LP9A_ASPKW  (Q96WQ9), 
LP9A_ASPNC  (A2R5N0), LP9A_ASPOR  (Q2US83), LP9A_ASPTM  (A0A5N6V703), 
LP9A_ASPTN  (Q0CEU4), LP9A_BOTFB  (A0A384K4U6), LP9A_HYPJE  (O14405), 
LP9A_HYPJQ  (G0R6T8), LP9A_NEOFI  (A1DBS6), LP9A_NEUCR  (Q7S439), 
LP9A_PODAN  (B2B629), LP9B_EMENI  (Q5BCX8), LP9B_PODAN  (B2AVF1), 
LP9C_ASPFU  (Q4WBU0), LP9C_BOTFB  (A0A384JJB6), LP9C_NEUCR  (Q7SHI8), 
LP9E_EMENI  (Q5AQA6), LP9E_PODAN  (B2ATL7), LP9G_ASPTM  (A0A5N6UV50), 
LP9G_THETT  (G2QZK6), LP9H_THET4  (G2Q9T3), LP9_AGABI   (Q00023), 
LP9_COPC7   (A8NCG7), MANA_HYPJR  (Q99036), MANF_ASPFC  (B0Y9E7), 
MANF_ASPFN  (B8NIV9), MANF_ASPFU  (Q4WBS1), MANF_ASPOR  (Q2U2I3), 
MANF_EMENI  (Q5AR04), MANF_NEOFI  (A1DBV1), PSBP_PORPU  (P50272), 
XG74_HYPJQ  (Q7Z9M8), XYN1_HUMGT  (P79046), XYN1_PENPR  (A0A2U7QU15), 
XYN6_PYRGI  (Q8NJ73), XYN6_PYRO7  (G4MPQ7), XYNA_PHACH  (Q9HEZ1), 
XYNA_TALFU  (Q8WZJ4), XYNB_NEOPA  (Q02290), XYNB_PENOX  (E7EF85), 
XYNB_PHACH  (B7SIW1), XYNB_TALFU  (Q8J0K5), XYNC_NEOPA  (Q9UV68), 
XYNC_PHACH  (B7SIW2), XYND_GIBZE  (I1S3C6), XYND_TALFU  (Q5ZNB1), 
XYS20_NEOPA (A8TGA1), YKK5_SCHPO  (Q9P7F1)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

MANF_ASPCL  (A1C8U0)


				
	

	

		PDB
[Detailed view]		
		
			20 PDB
			


			1AZ6; 1AZH; 1AZK; 1CBH; 2CBH; 2MWJ; 2MWK; 4BMF; 5X34; 5X35; 5X36; 5X37; 
			
				5X38; 5X39; 5X3C; 6RV8; 7YHF; 7YHG; 7YHH; 7YHI
			
			

			» more