PROSITE entry PS00562
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General information about the entry
| Entry name [info] | CBM1_1 |
| Accession [info] | PS00562 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00486 |
Name and characterization of the entry
| Description [info] | CBM1 (carbohydrate binding type-1) domain signature. |
| Pattern [info] |
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C. |
Numerical results [info]
| Total number of hits | 103 in 99 different sequences |
| Number of true positive hits | 103 in 99 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.04 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 4 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 7 |
| Site [info] | disulfide at position 9 |
| Site [info] | disulfide at position 16 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
99 sequences
AXE1_ASPFU (Q4WBW4), AXE1_COPC7 (A8PB24), AXE1_HYPJE (Q99034), AXE1_NEOFI (A1DBP9), AXE1_TALPU (Q8NJP6), CBHB_ASPAC (O59843), CBHB_ASPCL (A1CU44), CBHB_ASPFC (B0Y8K2), CBHB_ASPFU (Q4WM08), CBHB_ASPNC (A2QAI7), CBHB_ASPNG (Q9UVS8), CBHB_ASPTN (Q0CMT2), CBHB_EMENI (Q8NK02), CBHB_NEOFI (A1DNL0), CBHC_ASPCL (A1CCN4), CBHC_ASPFC (B0XWL3), CBHC_ASPFU (Q4WFK4), CBHC_ASPNC (A2QYR9), CBHC_ASPTN (Q0CFP1), CBHC_EMENI (Q5B2E8), CBHC_NEOFI (A1DJQ7), CE12C_MAGO7 (G4NBX2), CEL1_AGABI (Q00023), CEL61_THET4 (G2Q9T3), CEL6A_MAGO7 (G4MM92), CEL6A_PODAN (B2ABX7), CEL7A_THET4 (G2QCS4), CUTI1_VERDA (A0A2J8C362), EG5A_PHACH (Q66NB7), EGLD_ASPCL (A1C4H2), EGLD_ASPFC (B0Y9G4), EGLD_ASPFN (B8MXJ7), EGLD_ASPFU (Q4WBU0), EGLD_ASPKW (Q96WQ9), EGLD_ASPNC (A2R5N0), EGLD_ASPOR (Q2US83), EGLD_ASPTN (Q0CEU4), EGLD_EMENI (Q5BCX8), EGLD_NEOFI (A1DBS6), FAEB_TALFU (Q9HE18), FAEB_TALSN (B8M9H9), GCE1_PHACR (P0CT87), GCE1_PODAN (B2ABS0), GCE1_SODAL (A0A1D8EJG8), GCE_CERUI (A0A0A7EQR3), GCE_HYPJQ (G0RV93), GH6D_PODAN (B2ADA5), GUN1_HYPJE (P07981), GUN1_HYPJR (A0A024SNB7), GUN1_TRILO (Q12714), GUN2_HYPJE (P07982), GUN2_HYPJR (A0A024SH20), GUN3_HUMIN (Q12624), GUN3_NEUCR (Q7SDR1), GUN4_HYPJE (O14405), GUN5_HYPJE (P43317), GUNB_FUSOX (P46236), GUNF_FUSOX (P46239), GUNK_FUSOX (P45699), GUX1A_NEUCR (Q7SA23), GUX1B_NEUCR (P38676), GUX1_HUMGT (P15828), GUX1_HYPJE (P62694), GUX1_HYPJR (A0A024RXP8), GUX1_HYPRU (P19355), GUX1_PENJA (Q06886), GUX1_PHACH (P13860), GUX1_TRIHA (Q9P8P3), GUX1_TRIKO (P62695), GUX2_AGABI (Q92400), GUX2_HYPJE (P07987), GUX2_HYPJR (A0A024SH76), GUX3_AGABI (P49075), GUX6_HUMIN (Q9C1S9), GUXC_FUSOX (P46238), MANA_HYPJR (Q99036), MANF_ASPFC (B0Y9E7), MANF_ASPFN (B8NIV9), MANF_ASPFU (Q4WBS1), MANF_ASPOR (Q2U2I3), MANF_EMENI (Q5AR04), MANF_NEOFI (A1DBV1), PSBP_PORPU (P50272), XG74_HYPJQ (Q7Z9M8), XYN1_HUMGT (P79046), XYN6_MAGGR (Q8NJ73), XYN6_MAGO7 (G4MPQ7), XYNA_PHACH (Q9HEZ1), XYNA_TALFU (Q8WZJ4), XYNB_NEOPA (Q02290), XYNB_PENOX (E7EF85), XYNB_PHACH (B7SIW1), XYNB_TALFU (Q8J0K5), XYNC_NEOPA (Q9UV68), XYNC_PHACH (B7SIW2), XYND_GIBZE (I1S3C6), XYND_TALFU (Q5ZNB1), XYS20_NEOPA (A8TGA1), YKK5_SCHPO (Q9P7F1)» more
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| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
MANF_ASPCL (A1C8U0) |
| PDB [Detailed view] |
16 PDB
1AZ6; 1AZH; 1AZK; 1CBH; 2CBH; 2MWJ; 2MWK; 4BMF; 5X34; 5X35; 5X36; 5X37; 5X38; 5X39; 5X3C; 6RV8 » more |