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| Entry: PS00562 |
General information about the entry
| Entry name [info] | CBM1_1 |
| Accession [info] | PS00562 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 02-JUN-2021 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00486 |
Name and characterization of the entry
| Description [info] | CBM1 (carbohydrate binding type-1) domain signature. |
| Pattern [info] |
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C. |
Numerical results [info]
| Total number of hits | 102 in 98 different sequences |
| Number of true positive hits | 102 in 98 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.03 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 4 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 7 |
| Site [info] | disulfide at position 9 |
| Site [info] | disulfide at position 16 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
98 sequences
AXE1_ASPFU (Q4WBW4 ), AXE1_COPC7 (A8PB24 ), AXE1_HYPJE (Q99034 ), AXE1_NEOFI (A1DBP9 ), AXE1_TALPU (Q8NJP6 ), CBHB_ASPAC (O59843 ), CBHB_ASPCL (A1CU44 ), CBHB_ASPFC (B0Y8K2 ), CBHB_ASPFU (Q4WM08 ), CBHB_ASPNC (A2QAI7 ), CBHB_ASPNG (Q9UVS8 ), CBHB_ASPTN (Q0CMT2 ), CBHB_EMENI (Q8NK02 ), CBHB_NEOFI (A1DNL0 ), CBHC_ASPCL (A1CCN4 ), CBHC_ASPFC (B0XWL3 ), CBHC_ASPFU (Q4WFK4 ), CBHC_ASPNC (A2QYR9 ), CBHC_ASPTN (Q0CFP1 ), CBHC_EMENI (Q5B2E8 ), CBHC_NEOFI (A1DJQ7 ), CE12C_MAGO7 (G4NBX2 ), CEL1_AGABI (Q00023 ), CEL61_MYCTT (G2Q9T3 ), CEL6A_MAGO7 (G4MM92 ), CEL6A_PODAN (B2ABX7 ), CEL7A_MYCTT (G2QCS4 ), EG5A_PHACH (Q66NB7 ), EGLD_ASPCL (A1C4H2 ), EGLD_ASPFC (B0Y9G4 ), EGLD_ASPFN (B8MXJ7 ), EGLD_ASPFU (Q4WBU0 ), EGLD_ASPKW (Q96WQ9 ), EGLD_ASPNC (A2R5N0 ), EGLD_ASPOR (Q2US83 ), EGLD_ASPTN (Q0CEU4 ), EGLD_EMENI (Q5BCX8 ), EGLD_NEOFI (A1DBS6 ), FAEB_TALFU (Q9HE18 ), FAEB_TALSN (B8M9H9 ), GCE1_PHACR (P0CT87 ), GCE1_PODAN (B2ABS0 ), GCE1_SODAL (A0A1D8EJG8), GCE_CERUI (A0A0A7EQR3), GCE_HYPJQ (G0RV93 ), GH6D_PODAN (B2ADA5 ), GUN1_HYPJE (P07981 ), GUN1_HYPJR (A0A024SNB7), GUN1_TRILO (Q12714 ), GUN2_HYPJE (P07982 ), GUN2_HYPJR (A0A024SH20), GUN3_HUMIN (Q12624 ), GUN3_NEUCR (Q7SDR1 ), GUN4_HYPJE (O14405 ), GUN5_HYPJE (P43317 ), GUNB_FUSOX (P46236 ), GUNF_FUSOX (P46239 ), GUNK_FUSOX (P45699 ), GUX1A_NEUCR (Q7SA23 ), GUX1B_NEUCR (P38676 ), GUX1_HUMGT (P15828 ), GUX1_HYPJE (P62694 ), GUX1_HYPJR (A0A024RXP8), GUX1_HYPRU (P19355 ), GUX1_PENJA (Q06886 ), GUX1_PHACH (P13860 ), GUX1_TRIHA (Q9P8P3 ), GUX1_TRIKO (P62695 ), GUX2_AGABI (Q92400 ), GUX2_HYPJE (P07987 ), GUX2_HYPJR (A0A024SH76), GUX3_AGABI (P49075 ), GUX6_HUMIN (Q9C1S9 ), GUXC_FUSOX (P46238 ), MANA_HYPJR (Q99036 ), MANF_ASPFC (B0Y9E7 ), MANF_ASPFN (B8NIV9 ), MANF_ASPFU (Q4WBS1 ), MANF_ASPOR (Q2U2I3 ), MANF_EMENI (Q5AR04 ), MANF_NEOFI (A1DBV1 ), PSBP_PORPU (P50272 ), XG74_HYPJQ (Q7Z9M8 ), XYN1_HUMGT (P79046 ), XYN6_MAGGR (Q8NJ73 ), XYN6_MAGO7 (G4MPQ7 ), XYNA_PHACH (Q9HEZ1 ), XYNA_TALFU (Q8WZJ4 ), XYNB_NEOPA (Q02290 ), XYNB_PENOX (E7EF85 ), XYNB_PHACH (B7SIW1 ), XYNB_TALFU (Q8J0K5 ), XYNC_NEOPA (Q9UV68 ), XYNC_PHACH (B7SIW2 ), XYND_GIBZE (I1S3C6 ), XYND_TALFU (Q5ZNB1 ), XYS20_NEOPA (A8TGA1 ), YKK5_SCHPO (Q9P7F1 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
MANF_ASPCL (A1C8U0 ) |
| PDB [Detailed view] |
16 PDB
1AZ6; 1AZH; 1AZK; 1CBH; 2CBH; 2MWJ; 2MWK; 4BMF; 5X34; 5X35; 5X36; 5X37; 5X38; 5X39; 5X3C; 6RV8 » more |
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