PROSITE entry PS00572
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General information about the entry
Entry name [info] | GLYCOSYL_HYDROL_F1_1 |
Accession [info] | PS00572 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-DEC-1992 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00495 |
Associated ProRule [info] | PRU10055 |
Name and characterization of the entry
Description [info] | Glycosyl hydrolases family 1 active site. |
Pattern [info] |
[LIVMFSTC]-[LIVFYS]-[LIV]-[LIVMST]-E-N-G-[LIVMFAR]-[CSAGN]. |
Numerical results [info]
Total number of hits | 174 in 171 different sequences |
Number of true positive hits | 109 in 106 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 65 in 65 different sequences |
Number of false negative sequences | 96 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 62.64 % |
Recall (true positives / (true positives + false negatives)) | 53.17 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Site [info] | active_site at position 5 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
106 sequences
ABGA_CLOLO (Q46130 ), ARBB_DICCH (P26206 ), ASCB_ECOLI (P24240 ), BGAL_PYRWO (O52629 ), BGAL_SACS2 (P22498 ), BGAL_SACSH (P50388 ), BGAL_SULAC (P14288 ), BGL1B_PHACH (Q25BW4 ), BGL29_ORYSJ (A3C053 ), BGL34_ARATH (Q8GRX1 ), BGL35_ARATH (Q3ECS3 ), BGL37_ARATH (Q9C5C2 ), BGL38_ARATH (P37702 ), BGL45_ARATH (O80689 ), BGL46_ARATH (O80690 ), BGL47_ARATH (Q9SVS1 ), BGLA_ACET2 (P26208 ), BGLA_BACSU (P42973 ), BGLA_ECOLI (Q46829 ), BGLA_ENTAG (Q59437 ), BGLA_NIACI (Q03506 ), BGLA_PAEPO (P22073 ), BGLA_THEMA (Q08638 ), BGLA_THENE (P0C946 ), BGLA_THENN (B9K7M5 ), BGLB_ECOLI (P11988 ), BGLB_PAEPO (P22505 ), BGLB_THEBI (P38645 ), BGLC_BACSU (P42403 ), BGLFU_BIFBR (P94248 ), BGLH_BACSU (P40740 ), BGLS_AGRSA (P12614 ), BGLS_CALSA (P10482 ), BGLS_TRIRP (P26204 ), BGLT_TRIRP (P26205 ), CASB_KLEOX (Q48409 ), COX1_OSTNU (Q9B840 ), GMUD_BACSU (O05508 ), HGGL1_MAIZE (P49235 ), HGGL2_MAIZE (Q41761 ), HGGL_SECCE (Q9FYS3 ), HGL1A_WHEAT (Q1XIR9 ), HGL1B_WHEAT (Q1XH05 ), HGL1C_WHEAT (Q1XH04 ), HGL1D_WHEAT (D5MTF8 ), LACG2_STRPN (Q97QL9 ), LACG2_STRR6 (Q8DPP6 ), LACG_CLOAB (Q97EZ2 ), LACG_LACAI (P50977 ), LACG_LACCA (P14696 ), LACG_LACCB (B3W7I3 ), LACG_LACLL (P11546 ), LACG_LACRH (Q29ZJ1 ), LACG_LEPBD (C7N8L9 ), LACG_STAA1 (A7X569 ), LACG_STAA2 (A6U3R9 ), LACG_STAA3 (Q2FEU3 ), LACG_STAA8 (Q2G2D5 ), LACG_STAA9 (A5IUX8 ), LACG_STAAB (Q2YYJ9 ), LACG_STAAC (Q5HE16 ), LACG_STAAE (A6QJ33 ), LACG_STAAM (P67767 ), LACG_STAAN (P67768 ), LACG_STAAR (Q6GEP0 ), LACG_STAAS (Q6G7C5 ), LACG_STAAT (A8YYF6 ), LACG_STAAU (P11175 ), LACG_STAAW (P67769 ), LACG_STAEQ (Q5HM41 ), LACG_STAES (Q8CNF8 ), LACG_STAHJ (Q4L868 ), LACG_STRA3 (Q8E4S2 ), LACG_STREM (B4U1G6 ), LACG_STRGC (Q9EV38 ), LACG_STRMU (P50978 ), LACG_STRP1 (Q99Y18 ), LACG_STRP3 (P0DB40 ), LACG_STRP6 (Q5X9Y7 ), LACG_STRP8 (Q8NZE1 ), LACG_STRPB (Q1J9V2 ), LACG_STRPC (Q1JK01 ), LACG_STRPD (Q1JEZ3 ), LACG_STRPF (Q1J4Q7 ), LACG_STRPG (A2RGE8 ), LACG_STRPJ (B8ZQ59 ), LACG_STRPM (Q48RC8 ), LACG_STRPQ (P0DB41 ), LACG_STRS7 (C0MDS5 ), LACG_STRSV (A3CPH0 ), LACG_STRU0 (B9DU98 ), LACG_STRZJ (C1CEE7 ), LCTL_HUMAN (Q6UWM7 ), LPH_HUMAN (P09848 ), LPH_RABIT (P09849 ), LPH_RAT (Q02401 ), LPH_SHEEP (W5PLZ6 ), MYR1_SINAL (P29737 ), MYR2_SINAL (P29738 ), MYR3_SINAL (P29092 ), MYRA_SINAL (P29736 ), MYRO_BRANA (Q00326 ), SFR2_ARATH (Q93Y07 ), SFR2_ORYSJ (Q8L6H7 ), VICHY_VICSN (A2SY66 ), Y997_RICBR (Q1RHT6 )» more
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UniProtKB/Swiss-Prot False negative sequences |
96 sequences
BAGBG_DALNI (A3RF67 ), BGL01_ARATH (Q3ECW8 ), BGL01_ORYSJ (Q5QMT0 ), BGL02_ARATH (Q9FMD8 ), BGL02_ORYSJ (B7F8N7 ), BGL03_ARATH (O65458 ), BGL03_ORYSJ (Q8RZL1 ), BGL04_ARATH (Q9ZUI3 ), BGL04_ORYSJ (Q5N863 ), BGL05_ARATH (Q8RXN9 ), BGL05_ORYSJ (Q5JK35 ), BGL06_ARATH (Q682B4 ), BGL06_ORYSJ (Q8L7J2 ), BGL07_ARATH (Q9LZJ1 ), BGL07_ORYSJ (Q75I93 ), BGL08_ARATH (Q67XN2 ), BGL08_ORYSJ (Q75I94 ), BGL09_ARATH (Q9STP4 ), BGL09_ORYSJ (B7ECS8 ), BGL10_ARATH (Q93ZI4 ), BGL10_ORYSJ (Q7F9K4 ), BGL11_ARATH (B3H5Q1 ), BGL11_ORYSJ (Q7XKV5 ), BGL12_ARATH (Q9FH03 ), BGL12_ORYSI (B8AVF0 ), BGL12_ORYSJ (Q7XKV4 ), BGL13_ARATH (Q9LU02 ), BGL13_ORYSJ (Q7XKV2 ), BGL14_ARATH (Q9SLA0 ), BGL14_ORYSJ (Q7XPY7 ), BGL15_ARATH (O64879 ), BGL15_ORYSJ (Q7XPY5 ), BGL16_ARATH (Q9M1D0 ), BGL16_ORYSJ (Q7XSK2 ), BGL17_ARATH (O64882 ), BGL17_ORYSJ (Q7XSK1 ), BGL18_ARATH (Q9SE50 ), BGL18_ORYSJ (Q7XSK0 ), BGL19_ARATH (Q9LIF9 ), BGL19_ORYSJ (Q0DIT2 ), BGL1A_PHACH (Q25BW5 ), BGL20_ARATH (Q84WV2 ), BGL20_ORYSJ (B9FHH2 ), BGL21_ARATH (Q9C525 ), BGL21_ORYSJ (Q60DY1 ), BGL22_ARATH (Q9C8Y9 ), BGL22_ORYSJ (Q60DX8 ), BGL23_ARATH (Q9SR37 ), BGL23_ORYSJ (Q6L597 ), BGL24_ARATH (Q9LKR7 ), BGL24_ORYSJ (Q5Z9Z0 ), BGL25_ARATH (O82772 ), BGL25_ORYSJ (Q0DA21 ), BGL26_ARATH (O64883 ), BGL26_ORYSJ (A3BMZ5 ), BGL27_ARATH (Q9M1D1 ), BGL27_ORYSJ (Q84YK7 ), BGL28_ARATH (Q4V3B3 ), BGL28_ORYSJ (Q7EXZ4 ), BGL29_ARATH (Q8GXT2 ), BGL30_ARATH (Q9M1C9 ), BGL30_ORYSJ (Q0J0N4 ), BGL31_ARATH (Q9FLU9 ), BGL31_ORYSJ (B7F7K7 ), BGL32_ARATH (Q9FLU8 ), BGL32_ORYSJ (Q0J0G2 ), BGL33_ARATH (O48779 ), BGL33_ORYSJ (Q0J0G1 ), BGL34_ORYSJ (Q339X2 ), BGL35_ORYSJ (Q53NF0 ), BGL36_ARATH (Q9C8K1 ), BGL38_ORYSJ (Q2QSR8 ), BGL39_ARATH (Q3E8E5 ), BGL40_ARATH (Q9FZE0 ), BGL41_ARATH (Q9FIU7 ), BGL42_ARATH (Q9FIW4 ), BGL43_ARATH (Q9LV34 ), BGL44_ARATH (Q9LV33 ), BGLC_OLEEU (Q8GVD0 ), FURH_VIBFR (Q75W17 ), GBA3_CAVPO (P97265 ), GBA3_HUMAN (Q9H227 ), GBA3_PONAB (Q5RF65 ), HIUH_SOYBN (Q8S3J3 ), KLOTB_HUMAN (Q86Z14 ), KLOTB_MOUSE (Q99N32 ), KLOT_HUMAN (Q9UEF7 ), KLOT_MACFA (Q8WP17 ), KLOT_MOUSE (O35082 ), KLOT_RAT (Q9Z2Y9 ), LACG1_STRPN (Q97SA9 ), LACG1_STRR6 (Q8DQZ1 ), LCTL_MOUSE (Q8K1F9 ), MYRO1_BREBR (Q95X01 ), RG1_RAUSE (Q9SPP9 ), SG1_RAUSE (Q8GU20 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
MYRO2_BREBR (P83179 ) |
UniProtKB/Swiss-Prot False positive sequences |
65 sequences
ACH1_NEUCR (P15937 ), AKR2A_ARATH (Q9SAR5 ), AKR2B_ARATH (Q29Q26 ), APT_PSYIN (A1SX04 ), ATC4_YEAST (Q12675 ), BAMC_ECOLI (P0A903 ), BAMC_SHIFL (P0A904 ), CH10_STRA3 (P63768 ), CH10_STRA5 (P63769 ), COX1_CHOBI (P50668 ), COX1_CHOFU (P50669 ), COX1_CHOOC (P67793 ), COX1_CHOPI (P67794 ), COX1_CHRKN (Q9B229 ), CRTN_METSP (Q4VKV1 ), FBIB_MYCLE (Q9CCK2 ), GYRA_AMICL (D5ECW5 ), GYRA_BRAHW (C0R046 ), GYRA_CLOAB (P94605 ), GYRA_HELPJ (Q9ZLD9 ), GYRA_HELPY (P48370 ), GYRA_STRP1 (Q9L7Q5 ), GYRA_STRP3 (P0DG02 ), GYRA_STRP6 (Q5XC58 ), GYRA_STRP8 (Q8P116 ), GYRA_STRPQ (P0DG03 ), HFLX_FLAPJ (A6H294 ), HMA9_ORYSJ (A0A0P0X004), HT1_IXOHO (Q5UB45 ), KDISB_DANRE (Q7T163 ), LAC3_ARATH (Q56YT0 ), MAP11_CAEEL (P91859 ), MBB1A_DANRE (Q6DRL5 ), MZT1_ASPCL (A1CQI3 ), MZT1_BOTFB (A6S6H9 ), MZT1_COCIM (Q1DRC2 ), MZT1_EMENI (Q5BDL9 ), MZT1_SCLS1 (A7EXZ2 ), NCAP_INCAA (Q6I7C0 ), NCAP_INCCA (P08028 ), NCAP_INCJH (Q9IMP6 ), NRNA_BACSU (O34600 ), NSE1_XENTR (Q6P881 ), OTNK_ACTSZ (A6VKK5 ), OTNK_HAEIN (P44093 ), PII2_ARATH (Q5PP26 ), RGYR_THEMA (O51934 ), RIMS1_HUMAN (Q86UR5 ), RIMS1_MOUSE (Q99NE5 ), RIMS1_RAT (Q9JIR4 ), RIMS3_HUMAN (Q9UJD0 ), RPO2C_METVS (P41557 ), RUVC_MYCLE (P40834 ), SC24C_HUMAN (P53992 ), SFSA_ACTPJ (B0BSG6 ), SPTCS_HUMAN (Q96JI7 ), SSTT_STRA1 (Q3JZQ1 ), SSTT_STRA3 (Q8E3S4 ), SSTT_STRA5 (Q8DY58 ), UBP5_YEAST (P39944 ), URED_PROM1 (A2C4R9 ), URED_PROMT (Q46IY6 ), VINT_BPL2 (P42540 ), YDGC_BACSU (P96701 ), YI31_SCHPO (Q9HE12 )» more |
PDB [Detailed view] |
95 PDB
1BGA; 1BGG; 1CBG; 1DWA; 1DWF; 1DWG; 1DWH; 1DWI; 1DWJ; 1E1E; 1E1F; 1E4I; 1E4L; 1E4M; 1E4N; 1E55; 1E56; 1E6Q; 1E6S; 1E6X; 1E70; 1E71; 1E72; 1E73; 1GOW; 1H49; 1HXJ; 1MYR; 1OD0; 1OIF; 1OIM; 1OIN; 1PBG; 1QOX; 1TR1; 1UWI; 1UWQ; 1UWR; 1UWS; 1UWT; 1UWU; 1UYQ; 1UZ1; 1V08; 1W3J; 1W9B; 1W9D; 2CBU; 2CBV; 2CEQ; 2CER; 2CES; 2CET; 2DGA; 2J75; 2J77; 2J78; 2J79; 2J7B; 2J7C; 2J7D; 2J7E; 2J7F; 2J7G; 2J7H; 2JAL; 2JIE; 2O9P; 2O9R; 2O9T; 2PBG; 2VRJ; 2WBG; 2WC3; 2WC4; 2WXD; 2XHY; 2Z1S; 3AIQ; 3AIR; 3AIS; 3AIU; 3AIV; 3AIW; 3PBG; 4EAM; 4EAN; 4GXP; 5IXE; 5N6S; 5N6T; 5OGZ; 5OSS; 6QWI; 6R4K » more |