PROSITE entry PS00572
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General information about the entry
| Entry name [info] | GLYCOSYL_HYDROL_F1_1 |
| Accession [info] | PS00572 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-DEC-1992 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00495 |
| Associated ProRule [info] | PRU10055 |
Name and characterization of the entry
| Description [info] | Glycosyl hydrolases family 1 active site. |
| Pattern [info] |
[LIVMFSTC]-[LIVFYS]-[LIV]-[LIVMST]-E-N-G-[LIVMFAR]-[CSAGN]. |
Numerical results [info]
| Total number of hits | 175 in 172 different sequences |
| Number of true positive hits | 110 in 107 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 65 in 65 different sequences |
| Number of false negative sequences | 96 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 62.86 % |
| Recall (true positives / (true positives + false negatives)) | 53.40 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 2 |
| Site [info] | active_site at position 5 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
107 sequences
ABGA_CLOLO (Q46130), ARBB_DICCH (P26206), ASCB_ECOLI (P24240), BGAL_PYRWO (O52629), BGAL_SACS2 (P22498), BGAL_SACSH (P50388), BGAL_SULAC (P14288), BGL1B_PHACH (Q25BW4), BGL29_ORYSJ (A3C053), BGL34_ARATH (Q8GRX1), BGL35_ARATH (Q3ECS3), BGL37_ARATH (Q9C5C2), BGL38_ARATH (P37702), BGL45_ARATH (O80689), BGL46_ARATH (O80690), BGL47_ARATH (Q9SVS1), BGLA_ACET2 (P26208), BGLA_BACSU (P42973), BGLA_ECOLI (Q46829), BGLA_ENTAG (Q59437), BGLA_NIACI (Q03506), BGLA_PAEPO (P22073), BGLA_THEMA (Q08638), BGLA_THENE (P0C946), BGLA_THENN (B9K7M5), BGLB_ECOLI (P11988), BGLB_PAEPO (P22505), BGLB_THEBI (P38645), BGLC_BACSU (P42403), BGLFU_BIFBR (P94248), BGLH_BACSU (P40740), BGLS_AGRSA (P12614), BGLS_CALSA (P10482), BGLS_TRIRP (P26204), BGLT_TRIRP (P26205), CASB_KLEOX (Q48409), COX1_OSTNU (Q9B840), GH1A_CALOW (E4Q361), GMUD_BACSU (O05508), HGGL1_MAIZE (P49235), HGGL2_MAIZE (Q41761), HGGL_SECCE (Q9FYS3), HGL1A_WHEAT (Q1XIR9), HGL1B_WHEAT (Q1XH05), HGL1C_WHEAT (Q1XH04), HGL1D_WHEAT (D5MTF8), LACG2_STRPN (Q97QL9), LACG2_STRR6 (Q8DPP6), LACG_CLOAB (Q97EZ2), LACG_LACAI (P50977), LACG_LACCA (P14696), LACG_LACCB (B3W7I3), LACG_LACLL (P11546), LACG_LACRH (Q29ZJ1), LACG_LEPBD (C7N8L9), LACG_STAA1 (A7X569), LACG_STAA2 (A6U3R9), LACG_STAA3 (Q2FEU3), LACG_STAA8 (Q2G2D5), LACG_STAA9 (A5IUX8), LACG_STAAB (Q2YYJ9), LACG_STAAC (Q5HE16), LACG_STAAE (A6QJ33), LACG_STAAM (P67767), LACG_STAAN (P67768), LACG_STAAR (Q6GEP0), LACG_STAAS (Q6G7C5), LACG_STAAT (A8YYF6), LACG_STAAU (P11175), LACG_STAAW (P67769), LACG_STAEQ (Q5HM41), LACG_STAES (Q8CNF8), LACG_STAHJ (Q4L868), LACG_STRA3 (Q8E4S2), LACG_STREM (B4U1G6), LACG_STRGC (Q9EV38), LACG_STRMU (P50978), LACG_STRP1 (Q99Y18), LACG_STRP3 (P0DB40), LACG_STRP6 (Q5X9Y7), LACG_STRP8 (Q8NZE1), LACG_STRPB (Q1J9V2), LACG_STRPC (Q1JK01), LACG_STRPD (Q1JEZ3), LACG_STRPF (Q1J4Q7), LACG_STRPG (A2RGE8), LACG_STRPJ (B8ZQ59), LACG_STRPM (Q48RC8), LACG_STRPQ (P0DB41), LACG_STRS7 (C0MDS5), LACG_STRSV (A3CPH0), LACG_STRU0 (B9DU98), LACG_STRZJ (C1CEE7), LCTL_HUMAN (Q6UWM7), LPH_HUMAN (P09848), LPH_RABIT (P09849), LPH_RAT (Q02401), LPH_SHEEP (W5PLZ6), MYR1_SINAL (P29737), MYR2_SINAL (P29738), MYR3_SINAL (P29092), MYRA_SINAL (P29736), MYRO_BRANA (Q00326), SFR2_ARATH (Q93Y07), SFR2_ORYSJ (Q8L6H7), VICHY_VICSN (A2SY66), Y997_RICBR (Q1RHT6)» more
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| UniProtKB/Swiss-Prot False negative sequences |
96 sequences
BAGBG_DALNI (A3RF67), BGL01_ARATH (Q3ECW8), BGL01_ORYSJ (Q5QMT0), BGL02_ARATH (Q9FMD8), BGL02_ORYSJ (B7F8N7), BGL03_ARATH (O65458), BGL03_ORYSJ (Q8RZL1), BGL04_ARATH (Q9ZUI3), BGL04_ORYSJ (Q5N863), BGL05_ARATH (Q8RXN9), BGL05_ORYSJ (Q5JK35), BGL06_ARATH (Q682B4), BGL06_ORYSJ (Q8L7J2), BGL07_ARATH (Q9LZJ1), BGL07_ORYSJ (Q75I93), BGL08_ARATH (Q67XN2), BGL08_ORYSJ (Q75I94), BGL09_ARATH (Q9STP4), BGL09_ORYSJ (B7ECS8), BGL10_ARATH (Q93ZI4), BGL10_ORYSJ (Q7F9K4), BGL11_ARATH (B3H5Q1), BGL11_ORYSJ (Q7XKV5), BGL12_ARATH (Q9FH03), BGL12_ORYSI (B8AVF0), BGL12_ORYSJ (Q7XKV4), BGL13_ARATH (Q9LU02), BGL13_ORYSJ (Q7XKV2), BGL14_ARATH (Q9SLA0), BGL14_ORYSJ (Q7XPY7), BGL15_ARATH (O64879), BGL15_ORYSJ (Q7XPY5), BGL16_ARATH (Q9M1D0), BGL16_ORYSJ (Q7XSK2), BGL17_ARATH (O64882), BGL17_ORYSJ (Q7XSK1), BGL18_ARATH (Q9SE50), BGL18_ORYSJ (Q7XSK0), BGL19_ARATH (Q9LIF9), BGL19_ORYSJ (Q0DIT2), BGL1A_PHACH (Q25BW5), BGL20_ARATH (Q84WV2), BGL20_ORYSJ (B9FHH2), BGL21_ARATH (Q9C525), BGL21_ORYSJ (Q60DY1), BGL22_ARATH (Q9C8Y9), BGL22_ORYSJ (Q60DX8), BGL23_ARATH (Q9SR37), BGL23_ORYSJ (Q6L597), BGL24_ARATH (Q9LKR7), BGL24_ORYSJ (Q5Z9Z0), BGL25_ARATH (O82772), BGL25_ORYSJ (Q0DA21), BGL26_ARATH (O64883), BGL26_ORYSJ (A3BMZ5), BGL27_ARATH (Q9M1D1), BGL27_ORYSJ (Q84YK7), BGL28_ARATH (Q4V3B3), BGL28_ORYSJ (Q7EXZ4), BGL29_ARATH (Q8GXT2), BGL30_ARATH (Q9M1C9), BGL30_ORYSJ (Q0J0N4), BGL31_ARATH (Q9FLU9), BGL31_ORYSJ (B7F7K7), BGL32_ARATH (Q9FLU8), BGL32_ORYSJ (Q0J0G2), BGL33_ARATH (O48779), BGL33_ORYSJ (Q0J0G1), BGL34_ORYSJ (Q339X2), BGL35_ORYSJ (Q53NF0), BGL36_ARATH (Q9C8K1), BGL38_ORYSJ (Q2QSR8), BGL39_ARATH (Q3E8E5), BGL40_ARATH (Q9FZE0), BGL41_ARATH (Q9FIU7), BGL42_ARATH (Q9FIW4), BGL43_ARATH (Q9LV34), BGL44_ARATH (Q9LV33), BGLC_OLEEU (Q8GVD0), FURH_VIBFR (Q75W17), GBA3_CAVPO (P97265), GBA3_HUMAN (Q9H227), GBA3_PONAB (Q5RF65), HIUH_SOYBN (Q8S3J3), KLOTB_HUMAN (Q86Z14), KLOTB_MOUSE (Q99N32), KLOT_HUMAN (Q9UEF7), KLOT_MACFA (Q8WP17), KLOT_MOUSE (O35082), KLOT_RAT(Q9Z2Y9), LACG1_STRPN (Q97SA9), LACG1_STRR6 (Q8DQZ1), LCTL_MOUSE (Q8K1F9), MYRO1_BREBR (Q95X01), RG1_RAUSE (Q9SPP9), SG1_RAUSE (Q8GU20)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
MYRO2_BREBR (P83179) |
| UniProtKB/Swiss-Prot False positive sequences |
65 sequences
ACH1_NEUCR (P15937), AKR2A_ARATH (Q9SAR5), AKR2B_ARATH (Q29Q26), APT_PSYIN (A1SX04), ATC4_YEAST (Q12675), BAMC_ECOLI (P0A903), BAMC_SHIFL (P0A904), CH10_STRA3 (P63768), CH10_STRA5 (P63769), COX1_CHOBI (P50668), COX1_CHOFU (P50669), COX1_CHOOC (P67793), COX1_CHOPI (P67794), COX1_CHRKN (Q9B229), CRTN_METSP (Q4VKV1), FBIB_MYCLE (Q9CCK2), GYRA_AMICL (D5ECW5), GYRA_BRAHW (C0R046), GYRA_CLOAB (P94605), GYRA_HELPJ (Q9ZLD9), GYRA_HELPY (P48370), GYRA_STRP1 (Q9L7Q5), GYRA_STRP3 (P0DG02), GYRA_STRP6 (Q5XC58), GYRA_STRP8 (Q8P116), GYRA_STRPQ (P0DG03), HFLX_FLAPJ (A6H294), HMA9_ORYSJ (A0A0P0X004), HT1_IXOHO (Q5UB45), KDISB_DANRE (Q7T163), LAC3_ARATH (Q56YT0), MAP11_CAEEL (P91859), MBB1A_DANRE (Q6DRL5), MZT1_ASPCL (A1CQI3), MZT1_BOTFB (A6S6H9), MZT1_COCIM (Q1DRC2), MZT1_EMENI (Q5BDL9), MZT1_SCLS1 (A7EXZ2), NCAP_INCAA (Q6I7C0), NCAP_INCCA (P08028), NCAP_INCJH (Q9IMP6), NRNA_BACSU (O34600), NSE1_XENTR (Q6P881), OTNK_ACTSZ (A6VKK5), OTNK_HAEIN (P44093), PII2_ARATH (Q5PP26), RGYR_THEMA (O51934), RIMS1_HUMAN (Q86UR5), RIMS1_MOUSE (Q99NE5), RIMS1_RAT (Q9JIR4), RIMS3_HUMAN (Q9UJD0), RPO2C_METVS (P41557), RUVC_MYCLE (P40834), SC24C_HUMAN (P53992), SFSA_ACTPJ (B0BSG6), SPTCS_HUMAN (Q96JI7), SSTT_STRA1 (Q3JZQ1), SSTT_STRA3 (Q8E3S4), SSTT_STRA5 (Q8DY58), UBP5_YEAST (P39944), URED_PROM1 (A2C4R9), URED_PROMT (Q46IY6), VINT_BPL2 (P42540), YDGC_BACSU (P96701), YI31_SCHPO (Q9HE12)» more |
| PDB [Detailed view] |
99 PDB
1BGA; 1BGG; 1CBG; 1DWA; 1DWF; 1DWG; 1DWH; 1DWI; 1DWJ; 1E1E; 1E1F; 1E4I; 1E4L; 1E4M; 1E4N; 1E55; 1E56; 1E6Q; 1E6S; 1E6X; 1E70; 1E71; 1E72; 1E73; 1GOW; 1H49; 1HXJ; 1MYR; 1OD0; 1OIF; 1OIM; 1OIN; 1PBG; 1QOX; 1TR1; 1UWI; 1UWQ; 1UWR; 1UWS; 1UWT; 1UWU; 1UYQ; 1UZ1; 1V08; 1W3J; 1W9B; 1W9D; 2CBU; 2CBV; 2CEQ; 2CER; 2CES; 2CET; 2DGA; 2J75; 2J77; 2J78; 2J79; 2J7B; 2J7C; 2J7D; 2J7E; 2J7F; 2J7G; 2J7H; 2JAL; 2JIE; 2O9P; 2O9R; 2O9T; 2PBG; 2VRJ; 2WBG; 2WC3; 2WC4; 2WXD; 2XHY; 2Z1S; 3AIQ; 3AIR; 3AIS; 3AIU; 3AIV; 3AIW; 3PBG; 4EAM; 4EAN; 4GXP; 5IXE; 5N6S; 5N6T; 5OGZ; 5OSS; 6QWI; 6R4K; 7UZ1; 7UZ2; 7Z1I; 8IVY » more |