PROSITE entry PS00574
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PURL: https://purl.expasy.org/prosite/signature/PS00574
Direct ScanProsite submission
General information about the entry
| Entry name [info] | FATTY_ACID_DESATUR_2 |
| Accession [info] | PS00574 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00399 |
Name and characterization of the entry
| Description [info] | Fatty acid desaturases family 2 signature. |
| Pattern [info] |
[ST]-[SA]-x(3)-[QR]-[LI]-x(5,6)-D-Y-x(2)-[LIVMFYW]-[LIVM]-[DE]. |
Numerical results [info]
| Total number of hits | 23 in 23 different sequences |
| Number of true positive hits | 23 in 23 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 13 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 63.89 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
23 sequences
DESA_SYNY3 (P20388), DESA_SYNY4 (Q55230), STAD3_OPHAA (E3PZS0), STAD3_OPHSP (E3PZR9), STAD5_ORYSI (A2XSL4), STAD5_ORYSJ (Q40731), STAD6_ARATH (Q84VY3), STAD7_ARATH (O22832), STADS_BRANA (Q01771), STAD_BRANA (P29108), STAD_CARTI (P22243), STAD_CORSA (P32063), STAD_CUCSA (P32061), STAD_ELAGV (O24428), STAD_GOSHI (Q42770), STAD_HELAN (Q96456), STAD_LINUS (P32062), STAD_OLEEU (Q43593), STAD_RICCO (P22337), STAD_SIMCH (Q01753), STAD_SOLTU (P46253), STAD_SOYBN (Q42807), STAD_SPIOL (P28645)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
13 sequences
DESA_ANAVA (Q79F72), DESA_ARTPT (Q54794), DESA_PICP2 (Q55231), DESB_NOSS3 (Q704F0), DESB_SYNY3 (Q79EF1), DESC2_NOSS3 (Q704E9), DESC_ANAVA (Q79F73), DESC_SYNY3 (Q55406), DESD_ARTPT (Q54795), DESD_SYNY3 (Q08871), JAMB_MOOP1 (Q6E7K8), STAD_SOLCO (Q41319), TTUB_TERTT (C5BK13)» more |
| PDB [Detailed view] |
9 PDB
pdb_00001afr; pdb_00001oq4; pdb_00001oq7; pdb_00001oq9; pdb_00001oqb; pdb_00002j2f; pdb_00002xz0; pdb_00002xz1; pdb_00004v0j |