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PROSITE entry PS00577


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General information about the entry

Entry name [info] AVIDIN_1
Accession [info] PS00577
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00499

Name and characterization of the entry

Description [info] Avidin-like domain signature.
Pattern [info] 
[DENY]-x(2)-[KRI]-[STA]-x(2)-V-G-x-[DN]-x-[FW]-T-[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 12 in 12 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 12 sequences 

AVID_CHICK  (P02701), AVR1_CHICK  (O13153), AVR2_CHICK  (P56732), 

AVR3_CHICK  (P56733), AVR4_CHICK  (P56734), AVR6_CHICK  (P56735), 
AVR7_CHICK  (P56736), FBP1_STRPU  (P10079), FBP3_STRPU  (P49013), 
SAV1_STRVL  (Q53532), SAV2_STRVL  (Q53533), SAV_STRAV   (P22629)
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UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

AFAVI_AFIPF (A0A493R6X0), HOAVI_HOEPD (A9D857)


				
	

	

		PDB
[Detailed view]		
		
			258 PDB
			


			1AVD; 1AVE; 1DF8; 1HQQ; 1HXL; 1HXZ; 1HY2; 1I9H; 1IJ8; 1KFF; 1KL3; 1KL4; 
			
				1KL5; 1LCV; 1LCW; 1LCZ; 1LDO; 1LDQ; 1LEL; 1LUQ; 1MK5; 1MM9; 1MOY; 1N43; 
				1N4J; 1N7Y; 1N9M; 1N9Y; 1NBX; 1NC9; 1NDJ; 1NQM; 1NQN; 1PTS; 1RAV; 1RST; 
				1RSU; 1RXH; 1RXJ; 1RXK; 1SLD; 1SLE; 1SLF; 1SLG; 1SRE; 1SRF; 1SRG; 1SRH; 
				1SRI; 1SRJ; 1STP; 1STR; 1STS; 1SWA; 1SWB; 1SWC; 1SWD; 1SWE; 1SWF; 1SWG; 
				1SWH; 1SWJ; 1SWK; 1SWL; 1SWN; 1SWO; 1SWP; 1SWQ; 1SWR; 1SWU; 1VWA; 1VWB; 
				1VWC; 1VWD; 1VWE; 1VWF; 1VWG; 1VWH; 1VWI; 1VWJ; 1VWK; 1VWL; 1VWM; 1VWN; 
				1VWO; 1VWP; 1VWQ; 1VWR; 1VYO; 1WBI; 1Y52; 1Y53; 1Y55; 2A5B; 2A5C; 2A8G; 
				2AVI; 2BC3; 2C4I; 2CAM; 2F01; 2FHL; 2FHN; 2G5L; 2GH7; 2IZA; 2IZB; 2IZC; 
				2IZD; 2IZE; 2IZF; 2IZG; 2IZH; 2IZI; 2IZJ; 2IZK; 2IZL; 2MF6; 2OF8; 2OF9; 
				2OFA; 2OFB; 2QCB; 2RTA; 2RTB; 2RTC; 2RTD; 2RTE; 2RTF; 2RTG; 2RTH; 2RTI; 
				2RTJ; 2RTK; 2RTL; 2RTM; 2RTN; 2RTO; 2RTP; 2RTQ; 2RTR; 2WPU; 2Y3E; 2Y3F; 
				3FDC; 3MM0; 3PK2; 3RDM; 3RDO; 3RDQ; 3RDS; 3RDU; 3RDX; 3RE5; 3RE6; 3RY1; 
				3RY2; 3T6F; 3T6L; 3VGW; 3VHH; 3VHI; 3VHM; 3WYP; 3WYQ; 3WZN; 3WZO; 3WZP; 
				3WZQ; 3X00; 4BCS; 4BX5; 4BX6; 4BX7; 4CPE; 4CPF; 4CPH; 4CPI; 4DNE; 4GD9; 
				4GDA; 4GJV; 4I60; 4IRW; 4JHQ; 4JO6; 4OKA; 4U46; 4Y59; 4Y5D; 4YVB; 5B5F; 
				5B5G; 5CHK; 5F2B; 5HLM; 5IRU; 5IRW; 5JD2; 5K67; 5K68; 5L3Y; 5LUR; 5MYQ; 
				5N7X; 5N89; 5N8B; 5N8E; 5N8J; 5N8T; 5N8W; 5N99; 5TO2; 5VCQ; 5VKX; 5VL5; 
				5VL8; 5WBA; 5WBB; 5WBC; 5WBD; 6ANX; 6AVK; 6GH7; 6J6J; 6J6K; 6LNG; 6M9B; 
				6QW4; 6S4Q; 6SOK; 6T1E; 6UC3; 6UD1; 6UD6; 6UDB; 6UDC; 6VJK; 6VJL; 6XND; 
				6Y2M; 6Y2T; 6Y33; 6Y34; 7B74; 7DY0; 7EFC; 7EFD; 7EK8; 7EK9; 7NLV; 7P4Z; 
				7ZN1; 7ZX9; 7ZYL; 8AQD; 8AQJ; 8GVK
			
			

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