PROSITE entry PS00589
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General information about the entry
Entry name [info] | PTS_HPR_SER |
Accession [info] | PS00589 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00318 |
Name and characterization of the entry
Description [info] | PTS HPR domain serine phosphorylation site signature. |
Pattern [info] |
[GSTADE]-[KREQSTIV]-x-{EPRK}-{VPGL}-x-[KRDN]-S-[LIVMF](2)-{EVPL}-[LIVM]- {EATN}-x-[LIVM]-[GADE]. |
Numerical results [info]
Total number of hits | 144 in 143 different sequences |
Number of true positive hits | 79 in 78 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 65 in 65 different sequences |
Number of false negative sequences | 10 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 54.86 % |
Recall (true positives / (true positives + false negatives)) | 88.76 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Site [info] | phosphorylation at position 8 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
78 sequences
ACRB_ASPCL (A1CIK0), ACRB_ASPFC (B0Y4N5), ACRB_ASPFU (Q4WQG9), ACRB_ASPNC (A2Q9L8), ACRB_ASPOR (Q2UUI0), ACRB_ASPTN (Q0CT23), ACRB_EMENI (Q876Q0), ACRB_NEOFI (A1CW63), CRH_BACSU (O06976), CRH_HALH5 (Q9K708), PGLX_ECOHS (P0DUF9), PTFAH_ECO57 (P69812), PTFAH_ECOLI (P69811), PTFAH_HAEIN (P44715), PTFAH_SALTI (Q8Z591), PTFAH_SALTY (P17127), PTFAH_VIBCH (Q9KM70), PTFAX_RHOCA (P23388), PTFAX_XANCP (P45597), PTHP_BACSU (P08877), PTHP_BACTI (Q9F166), PTHP_BORBU (O51507), PTHP_BUCAI (Q9WXI5), PTHP_BUCAP (Q8KA49), PTHP_BUCBP (Q89B03), PTHP_CHLMU (Q9PK56), PTHP_CHLPN (Q9Z9E4), PTHP_CHLTR (O84341), PTHP_CUPNH (P23537), PTHP_ECO57 (P0AA06), PTHP_ECOL6 (P0AA05), PTHP_ECOLI (P0AA04), PTHP_ENTFA (P07515), PTHP_GEOSE (P42013), PTHP_HAEIN (P43921), PTHP_HALH5 (Q9K8D2), PTHP_KLEPN (P16481), PTHP_LACCA (Q9KJV3), PTHP_LACLA (Q9CJ83), PTHP_LACLC (Q9ZAD9), PTHP_LATSK (O07125), PTHP_LISIN (P0A439), PTHP_LISMO (P0A438), PTHP_LYSSH (Q84F84), PTHP_MYCCT (P45611), PTHP_MYCGE (P47287), PTHP_MYCPN (P75061), PTHP_NEIMA (P65876), PTHP_NEIMB (P65877), PTHP_PRIMG (O69250), PTHP_PSEAE (Q9HVV2), PTHP_PSEPU (Q9Z426), PTHP_SALTI (P0AA08), PTHP_SALTY (P0AA07), PTHP_SHIFL (P0AA09), PTHP_STAAC (Q5HH02), PTHP_STAAM (P0A0E1), PTHP_STAAN (P99143), PTHP_STAAR (Q6GI02), PTHP_STAAS (Q6GAD1), PTHP_STAAU (P0A0E3), PTHP_STAAW (P0A0E2), PTHP_STACA (P23534), PTHP_STAXY (Q9EYQ9), PTHP_STREI (Q9WXK8), PTHP_STRMU (P45596), PTHP_STRSL (P24366), PTHP_TREPA (O83598), PTHP_VIBCH (Q9KTD6), PTHP_XYLFA (Q9PDH6), PTHP_XYLFT (Q87DQ0), PTSO_ECO57 (P0A9N2), PTSO_ECOL6 (P0A9N1), PTSO_ECOLI (P0A9N0), PTSO_KLEOX (P51185), PTSO_PROMH (Q9ZA86), PTSO_SHIFL (P0A9N3), PTSO_VIBCH (Q9KP46)» more
|
UniProtKB/Swiss-Prot False negative sequences |
10 sequences
DHAM_ECOLI (P37349), DHAM_KLEOK (A0A0H3H456), DHAM_PANAM (D4GL26), DHAM_PROSM (P0DN88), PTFX1_ECOLI (P77439), PTFX2_ECOLI (P32670), PTFX_ECO57 (Q8XBQ8), PTFX_ECOL6 (Q8FFD8), PTFX_SHIFL (Q83QP3), PTSO_SHEVD (Q9S0K8)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PTHP_STRSA (P24365) |
UniProtKB/Swiss-Prot False positive sequences |
65 sequences
206L_IIV6 (Q91FW4), AB39G_ARATH (Q7PC84), AB5F_ARATH (Q9LV93), ABTB1_MOUSE (Q99LJ2), ABTB1_RAT (Q5XIU1), AMPM_HELVI (Q11000), ATX2_YEAST (Q12067), DGGGP_SULAC (Q4J8K2), DNLJ_MYCGA (Q7NAF8), FAP1_ARATH (Q9M1X2), FLD1_CAEEL (G5EF48), FOXF_DROME (Q9VS05), GPPA_PSEA6 (Q15N19), HNMT_XENTR (Q0V9P1), ILVD_PROMT (Q46LF6), IQG1_CANAL (Q5AH02), LRCH1_HUMAN (Q9Y2L9), MABP1_HUMAN (O60336), MABP1_MOUSE (Q6NS57), MASZ1_PSESM (Q88AB2), MASZ_ECOL6 (Q8FDN6), MASZ_ECOLI (P37330), MASZ_PSEFL (O05137), MASZ_PSEPK (Q88QX8), MASZ_SHIFL (P59663), MFTC_MYCS2 (A0QSB8), MHPA1_BURVG (A4JPY1), MHPA_COMTE (Q9S158), MHPA_CUPPJ (Q476N1), MHPA_PARXL (Q13QI0), NODD1_HYPPI (A0A2I6PIZ7), NRG1_RAT(P43322), OR83A_DROME (Q9VNB3), PBS5_CAEEL (Q9XUV0), PHYB1_SOLLC (Q9ZS62), PKS5_DICDI (Q86JI5), PPA14_ARATH (Q84LR6), PPA29_ARATH (Q9FMK9), PRIS_HALMA (Q5V554), RBGA_BACCR (Q819W8), RBGA_BACLD (Q65JP4), RK14_BIGNA (Q06J57), RL14_BDEBA (Q6MJ24), RPOC2_PROM1 (A2C4N0), RPOC2_PROMT (Q46J24), RS1_BUCBP (Q89AJ3), RS5_RHOBA (Q7UN03), SATC_AQUAE (O67174), SSTT_DESHY (Q24XD0), SYC_TREDE (Q73RJ6), TEX2_HUMAN (Q8IWB9), TEX2_MOUSE (Q6ZPJ0), TM41B_HUMAN (Q5BJD5), TM41B_PONAB (Q5RBZ8), TM41B_RAT (Q5FVN2), TM41B_XENLA (Q5U4K5), TM41B_XENTR (A4II98), TP53B_MOUSE (P70399), TRM5_ENCCU (Q8SVV3), TRPG_CRYNB (P0CN87), TRPG_CRYNH (P27710), TRPG_CRYNJ (P0CN86), VPS25_DANRE (Q6NWF4), Y389_CHLPN (Q9Z8F4), YCF2_PSINU (Q8WHW9)» more |
PDB [Detailed view] |
53 PDB
1CM2; 1CM3; 1FU0; 1GGR; 1HDN; 1J6T; 1JEM; 1K1C; 1KA5; 1KKL; 1KKM; 1MO1; 1MU4; 1PCH; 1PFH; 1POH; 1PTF; 1QFR; 1QR5; 1RZR; 1TXE; 1VRC; 1Y4Y; 1Y50; 1Y51; 1ZVV; 2AK7; 2FEP; 2HID; 2HPR; 2JEL; 2LRK; 2LRL; 2NZU; 2NZV; 2OEN; 2RLZ; 2XDF; 3CCD; 3EZA; 3EZB; 3EZE; 3OQM; 3OQN; 3OQO; 4XWJ; 5T17; 5T1N; 5T1O; 5YA0; 5YA1; 5YA2; 6KCR » more |