PROSITE entry PS00598
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS00598 |
| Entry name [info] | CHROMO_1 |
| Accession [info] | PS00598 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00517 |
Name and characterization of the entry
| Description [info] | Chromo domain signature. |
| Pattern [info] |
[FYL]-x-[LIVMC]-[KR]-W-x-[GDNR]-[FYWLME]-x(5,6)-[ST]-W-[ESV]-[PSTDEN]- x(2,3)-[LIVMC]. |
Numerical results [info]
| Total number of hits | 78 in 70 different sequences |
| Number of true positive hits | 78 in 70 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 40 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 66.10 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
70 sequences
CBX1_HUMAN (P83916), CBX1_MOUSE (P83917), CBX2_HUMAN (Q14781),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
40 sequences
CBXH2_CAEEL (G5EDE2), CEC4_CAEEL (Q19972), CHD3_CAEEL (Q22516),» more |
| PDB [Detailed view] |
94 PDB
1AP0; 1G6Z; 1GUW; 1KNA; 1KNE; 1PDQ; 1PFB; 1Q3L; 2B2T; 2B2U; 2B2V; 2B2W; » more |