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Entry: PS00598 |
Entry name [info] | CHROMO_1 |
Accession [info] | PS00598 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00517 |
Description [info] | Chromo domain signature. |
Pattern [info] |
[FYL]-x-[LIVMC]-[KR]-W-x-[GDNR]-[FYWLME]-x(5,6)-[ST]-W-[ESV]-[PSTDEN]- x(2,3)-[LIVMC]. |
Total number of hits | 76 in 68 different sequences |
Number of true positive hits | 76 in 68 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 50 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 60.32 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 2 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
68 sequences
CBX1_HUMAN (P83916 ), CBX1_MOUSE (P83917 ), CBX2_HUMAN (Q14781 ), CBX2_MOUSE (P30658 ), CBX3_HUMAN (Q13185 ), CBX3_MOUSE (P23198 ), CBX3_PONAB (Q5R6X7 ), CBX4_HUMAN (O00257 ), CBX4_MOUSE (O55187 ), CBX5_HUMAN (P45973 ), CBX5_MOUSE (Q61686 ), CBX6_HUMAN (O95503 ), CBX6_MOUSE (Q9DBY5 ), CBX7_HUMAN (O95931 ), CBX7_MOUSE (Q8VDS3 ), CBX7_RAT (P60889 ), CBX8_HUMAN (Q9HC52 ), CBX8_MOUSE (Q9QXV1 ), CDY1_HUMAN (Q9Y6F8 ), CDY2_HUMAN (Q9Y6F7 ), CDYL2_HUMAN (Q8N8U2 ), CDYL2_MOUSE (Q9D5D8 ), CDYL_HUMAN (Q9Y232 ), CDYL_MOUSE (Q9WTK2 ), CDYL_RAT (Q6AYK9 ), CEC1_CAEEL (P34618 ), CEC3_CAEEL (P45968 ), CHD1_BOMMO (A9X4T1 ), CHD1_CHICK (B6ZLK2 ), CHD1_DROME (Q7KU24 ), CHD1_HUMAN (O14646 ), CHD1_MOUSE (P40201 ), CHD1_YEAST (P32657 ), CHD2_HUMAN (O14647 ), CHD2_MOUSE (E9PZM4 ), CHD3_HUMAN (Q12873 ), CHD4_HUMAN (Q14839 ), CHD4_MOUSE (Q6PDQ2 ), CHP1_SCHPO (Q10103 ), CLR4_SCHPO (O60016 ), CMT1_ARATH (O49139 ), CMT1_ORYSJ (A0A0P0VUY4), CMT2_ORYSJ (Q5KQL9 ), CMT3_ARATH (Q94F88 ), HP1_DROME (P05205 ), HP1_DROVI (P29227 ), HRP3_SCHPO (O14139 ), LHP1_ARATH (Q946J8 ), LHP1_ORYSJ (Q339W7 ), LHP1_SOLLC (Q944N1 ), MPP8_HUMAN (Q99549 ), MPP8_MOUSE (Q3TYA6 ), MPP8_RAT (G3V8T1 ), PC_DROME (P26017 ), SUV39_DROME (P45975 ), SUV39_DROPS (Q294B9 ), SUV91_BOVIN (Q2NL30 ), SUV91_HUMAN (O43463 ), SUV91_MOUSE (O54864 ), SUV91_PONAB (Q5RB81 ), SUV92_BOVIN (Q32PH7 ), SUV92_CHICK (Q5F3W5 ), SUV92_HUMAN (Q9H5I1 ), SUV92_MACFA (Q4R3E0 ), SUV92_MOUSE (Q9EQQ0 ), SUV92_XENTR (Q28CQ7 ), SV91A_DANRE (Q6DGD3 ), SWI6_SCHPO (P40381 )» more
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UniProtKB/Swiss-Prot False negative sequences |
50 sequences
CEC4_CAEEL (Q19972 ), CHD3_CAEEL (Q22516 ), CHD3_DROME (O16102 ), CHD5_HUMAN (Q8TDI0 ), CHD6_HUMAN (Q8TD26 ), CHD7_CHICK (Q06A37 ), CHD7_HUMAN (Q9P2D1 ), CHD7_MOUSE (A2AJK6 ), CHD8_DANRE (B0R0I6 ), CHD8_HUMAN (Q9HCK8 ), CHD8_MOUSE (Q09XV5 ), CHD8_RAT (Q9JIX5 ), CHD8_XENTR (B5DE69 ), CHD9_HUMAN (Q3L8U1 ), CHD9_MOUSE (Q8BYH8 ), CHDM_DROME (O97159 ), CHP2_SCHPO (O42934 ), CHR4_ARATH (F4KBP5 ), CHR5_ARATH (F4IV99 ), CHR7_ARATH (F4JTF6 ), CMT1_MAIZE (Q9AXT8 ), CMT2_ARATH (Q94F87 ), CMT2_MAIZE (Q9ARI6 ), CMT3_MAIZE (Q8LPU5 ), CMT3_ORYSJ (C0SQ89 ), DCAF1_HUMAN (Q9Y4B6 ), DCAF1_MOUSE (Q80TR8 ), ELF1_SCHPO (O14134 ), ESA1_ASPOR (Q2UMQ5 ), ESA1_SCHPO (O94446 ), ESA1_YEAST (Q08649 ), HRP1_SCHPO (Q9US25 ), KAT8_HUMAN (Q9H7Z6 ), KAT8_MOUSE (Q9D1P2 ), KAT8_RAT (Q5XI06 ), LE418_CAEEL (G5EBZ4 ), MS3L1_HUMAN (Q8N5Y2 ), MS3L1_MOUSE (Q9WVG9 ), MS3L1_PONAB (Q5R6Y9 ), MS3L2_HUMAN (P0C860 ), MSL3_DROME (P50536 ), MSL3_DROVI (Q9NBL2 ), MYST1_ARATH (Q9FLF7 ), MYST1_ORYSJ (Q8LI34 ), MYST2_ARATH (Q9LXD7 ), NEW1_YEAST (Q08972 ), PKL_ARATH (Q9S775 ), SR43C_ARATH (O22265 ), SR43C_ORYSJ (Q8LSQ2 ), SUV91_XENLA (Q6NRE8 )» more |
PDB [Detailed view] |
81 PDB
1AP0; 1G6Z; 1GUW; 1KNA; 1KNE; 1PDQ; 1PFB; 1Q3L; 2B2T; 2B2U; 2B2V; 2B2W; 2B2Y; 2D9U; 2DNT; 2DNV; 2DY7; 2DY8; 2EE1; 2H1E; 2K1B; 2K28; 2KVM; 2L11; 2L12; 2L1B; 2MJ8; 2RSN; 2RSO; 2RVL; 2RVM; 2RVN; 3DM1; 3F2U; 3FDT; 3G7L; 3GV6; 3H91; 3I8Z; 3I90; 3I91; 3LWE; 3MTS; 3MWY; 3QO2; 3R93; 3SVM; 3TZD; 4HAE; 4MN3; 4NW2; 4O42; 4O9I; 4X3K; 4X3S; 4X3T; 4X3U; 5AFW; 5EJW; 5EPJ; 5EPK; 5EPL; 5EQ0; 5JJZ; 5O9G; 6ASZ; 6AT0; 6D07; 6FTX; 6G0L; 6MHA; 6Q3M; 6RYR; 6RYU; 6V2D; 6V2H; 6V2R; 6V2S; 6V3N; 6V41; 6V8W » more |