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PROSITE entry PS00603


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General information about the entry

Entry name [info] TK_CELLULAR_TYPE
Accession [info] PS00603
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00524

Name and characterization of the entry

Description [info] Thymidine kinase cellular-type signature.
Pattern [info]
[GA]-x(1,2)-[DE]-x-Y-x-[STAPV]-x-C-[NKR]-x-[CH]-[LIVMFYWH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 187 in 187 different sequences
Number of true positive hits 186 in 186 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 30
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.47 %
Recall (true positives / (true positives + false negatives)) 86.11 %

Comments [info]

Taxonomic range [info] Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
186 sequences

KITHA_ARATH (Q9S750), KITHB_ARATH (F4KBF5), KITH_ALIF1  (Q5E4F2), 
KITH_AMEPV  (P28852), KITH_ANOFW  (B7GMH4), KITH_ASFB7  (P18555), 
KITH_ASFK5  (P0C8I3), KITH_ASFM2  (P0C8I4), KITH_ASFP4  (P0C8I5), 
KITH_ASFWA  (P0C8I6), KITH_BACAA  (C3P292), KITH_BACAC  (C3LFK4), 
KITH_BACAH  (A0RLB6), KITH_BACAN  (Q81JX0), KITH_BACC0  (B7JHF2), 
KITH_BACC1  (Q72XC1), KITH_BACC2  (B7IQY3), KITH_BACC3  (C1F0Q7), 
KITH_BACC4  (B7HFM8), KITH_BACC7  (B7HY90), KITH_BACCN  (A7GV80), 
KITH_BACCQ  (B9IRW3), KITH_BACCR  (Q814U0), KITH_BACCZ  (Q630R8), 
KITH_BACHK  (Q6HAV3), KITH_BACLD  (Q65DU6), KITH_BACMK  (A9VSC8), 
KITH_BACP2  (A8FID5), KITH_BACSU  (Q03221), KITH_BACVZ  (A7Z9S5), 
KITH_BDEBA  (Q6MHW4), KITH_BOVIN  (A5D7R8), KITH_BPT4   (P13300), 
KITH_CALS4  (Q8RDA1), KITH_CBEPV  (Q05879), KITH_CFEPV  (Q05880), 
KITH_CHICK  (P04047), KITH_CHLAA  (A9WGI6), KITH_CHLAD  (B8G6Y1), 
KITH_CHLSY  (B9LJ65), KITH_CLOAB  (Q97F65), KITH_CLOB1  (A7FQF9), 
KITH_CLOB6  (C3KYH2), KITH_CLOBH  (A5HY32), KITH_CLOBJ  (C1FQ94), 
KITH_CLOBK  (B1IE18), KITH_CLOBL  (A7G9N9), KITH_CLOBM  (B1KSQ8), 
KITH_CLOTE  (Q898Y8), KITH_COLP3  (Q483R5), KITH_COPPD  (B5Y8S5), 
KITH_COXBU  (Q83A42), KITH_CRIGR  (P09768), KITH_DEIDV  (C1D0Z6), 
KITH_DICDI  (Q27564), KITH_DICT6  (B5YDB0), KITH_DICTD  (B8E001), 
KITH_ECO57  (P0A3L9), KITH_ECOL6  (Q8FHX4), KITH_ECOLI  (P23331), 
KITH_ENTFA  (Q831F5), KITH_FOWPN  (P10052), KITH_GEOKA  (Q5KUH1), 
KITH_GEOSW  (C5D9N8), KITH_GEOTN  (A4ITL0), KITH_HAEDU  (Q7VLH2), 
KITH_HAEI8  (Q4QN19), KITH_HAEIN  (P44309), KITH_HALH5  (Q9K6F0), 
KITH_HALS3  (B0R5S5), KITH_HALSA  (Q9HPQ9), KITH_HALWD  (Q18J88), 
KITH_HUMAN  (P04183), KITH_IDILO  (Q5QWC7), KITH_JANSC  (Q28M21), 
KITH_LACAC  (Q5FKZ1), KITH_LACJO  (Q74K26), KITH_LACLA  (Q9CHX5), 
KITH_LACPL  (Q88UT1), KITH_LATSS  (Q38WJ3), KITH_LEGPA  (Q5X7B5), 
KITH_LEGPH  (Q5ZXU5), KITH_LEGPL  (Q5WYR3), KITH_LISIN  (Q927U9), 
KITH_LISMF  (Q71WN4), KITH_LISMO  (Q8Y4A7), KITH_MACCJ  (B9E8G2), 
KITH_MALP2  (Q8EU99), KITH_MANSM  (Q65RN9), KITH_MESFL  (Q6F0I2), 
KITH_MESH2  (Q5ZZT0), KITH_MESH7  (Q4A7B8), KITH_MESHJ  (Q4A977), 
KITH_MIMIV  (Q5UP25), KITH_MONPV  (A0A7H0DN73), KITH_MONPZ  (P04363), 
KITH_MOUSE  (P04184), KITH_MYCCT  (Q2SSX9), KITH_MYCGA  (Q8RLE0), 
KITH_MYCGE  (P47280), KITH_MYCM1  (Q6KH30), KITH_MYCMS  (Q8VVL0), 
KITH_MYXVL  (Q9Q8N6), KITH_MYXVU  (P28851), KITH_NOVAD  (Q2G5F0), 
KITH_OCEIH  (Q8EM59), KITH_ORYSJ  (O81263), KITH_PASMU  (P57926), 
KITH_PECAS  (Q6D4R3), KITH_PHOLL  (Q7N457), KITH_PHOPR  (Q6LT81), 
KITH_PSELT  (A8F7B3), KITH_PYRAE  (Q8ZV53), KITH_RACVI  (Q90029), 
KITH_RFVKA  (P07605), KITH_RHIEC  (Q2K5N6), KITH_RHILO  (Q98HR4), 
KITH_RHIME  (Q92N38), KITH_RHOBA  (Q7UFR1), KITH_RHOSI  (Q9ZIG2), 
KITH_ROSCS  (A7NI79), KITH_ROSS1  (A5UZV5), KITH_RUEPO  (Q5LUY8), 
KITH_SALCH  (Q57NR0), KITH_SALPA  (Q5PCT4), KITH_SALRD  (Q2RZH4), 
KITH_SALTI  (Q8XFQ8), KITH_SALTY  (Q7CQF3), KITH_SHEON  (Q8ECK0), 
KITH_SHEVK  (P16600), KITH_SHIBS  (Q31ZS8), KITH_SHIDS  (Q32GW8), 
KITH_SHIFL  (P0A3M0), KITH_SHISS  (Q3Z0V3), KITH_SHOC1  (Q5WB52), 
KITH_STAA3  (Q2FF09), KITH_STAAB  (Q2YUN4), KITH_STAAC  (Q5HE81), 
KITH_STAAM  (P65230), KITH_STAAN  (P65231), KITH_STAAR  (Q6GEV6), 
KITH_STAAS  (Q6G7J1), KITH_STAAW  (Q8NVG5), KITH_STAEQ  (Q5HMA3), 
KITH_STAES  (Q8CRM9), KITH_STAHJ  (Q4L800), KITH_STAS1  (Q49Z66), 
KITH_STRA1  (Q3K118), KITH_STRA3  (Q8E5C2), KITH_STRA5  (Q8DZM3), 
KITH_STRGC  (P47848), KITH_STRMU  (Q8DU63), KITH_STRP1  (Q99ZP6), 
KITH_STRP3  (P0DB96), KITH_STRP6  (Q5XC70), KITH_STRP8  (Q8P126), 
KITH_STRPM  (Q48TL1), KITH_STRPN  (Q97R22), KITH_STRPQ  (P0DB97), 
KITH_STRR6  (Q8DPZ6), KITH_STRT1  (Q5M0B8), KITH_STRT2  (Q5M4W5), 
KITH_SWPVK  (P23335), KITH_THEKO  (Q5JGT7), KITH_THEMA  (Q9WYN2), 
KITH_THEP1  (A5IK18), KITH_THEP3  (B0K7G9), KITH_THEPX  (B0K1F4), 
KITH_THESQ  (B1L989), KITH_UREP2  (B1AJN5), KITH_UREPA  (Q9PPP5), 
KITH_UREU1  (B5ZCA9), KITH_VACCA  (O57203), KITH_VACCC  (P68564), 
KITH_VACCT  (Q9JFB7), KITH_VACCW  (P68563), KITH_VAR67  (P0DOM7), 
KITH_VARV   (P0DOM8), KITH_VIBCH  (Q9KST9), KITH_VIBPA  (Q87QJ8), 
KITH_VIBVU  (Q8D8R2), KITH_VIBVY  (Q7MLR4), KITH_YERPE  (Q8ZEJ1), 
KITH_YERPS  (Q66AM8), KITH_YMTV5  (Q90033), KITH_ZYMMO  (Q5NQ29)
» more

UniProtKB/Swiss-Prot
False negative sequences
30 sequences

KITH_AGRFC  (Q7CXF9), KITH_ALBFT  (Q21Q74), KITH_AYWBP  (Q2NIM1), 
KITH_BACFN  (Q5LHP5), KITH_BACFR  (Q64YL9), KITH_BACNA  (O52951), 
KITH_BACTN  (Q8A5G4), KITH_BLOFL  (Q7VQZ6), KITH_BLOPB  (Q492N1), 
KITH_CHRVO  (Q7NVK0), KITH_CUTAK  (Q6A8W6), KITH_DEIRA  (Q9RSY5), 
KITH_ENCCU  (O96720), KITH_FRATH  (Q2A3U3), KITH_FRATT  (Q5NH50), 
KITH_META1  (B3PM40), KITH_MYCPN  (P75070), KITH_ONYPE  (Q6YRB1), 
KITH_PHOV8  (A6L1E7), KITH_PORG3  (B2RJJ6), KITH_PORGI  (Q7MVV7), 
KITH_PSET1  (Q3IBU5), KITH_STRAW  (Q82KI9), KITH_STRCO  (O50519), 
KITH_XANAC  (Q8PEQ8), KITH_XANC8  (Q4UNV0), KITH_XANCP  (Q8P3C8), 
KITH_XANE5  (Q3BM98), KITH_XANOM  (Q2P902), KITH_XANOR  (Q5H6C5)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

KITH_RAT(P27158)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PURP_METS3  (A5UKI3)

		
PDB
[Detailed view]
14 PDB

1W4R; 1XBT; 1XX6; 2B8T; 2J87; 2J9R; 2JA1; 2ORV; 2ORW; 2QPO; 2QQ0; 2QQE; 2UZ3; 2WVJ
» more