PROSITE entry PS00603
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General information about the entry
| Entry name [info] | TK_CELLULAR_TYPE |
| Accession [info] | PS00603 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00524 |
Name and characterization of the entry
| Description [info] | Thymidine kinase cellular-type signature. |
| Pattern [info] |
[GA]-x(1,2)-[DE]-x-Y-x-[STAPV]-x-C-[NKR]-x-[CH]-[LIVMFYWH]. |
Numerical results [info]
| Total number of hits | 187 in 187 different sequences |
| Number of true positive hits | 186 in 186 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 30 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 99.47 % |
| Recall (true positives / (true positives + false negatives)) | 86.11 % |
Comments [info]
| Taxonomic range [info] | Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
186 sequences
KITHA_ARATH (Q9S750), KITHB_ARATH (F4KBF5), KITH_ALIF1 (Q5E4F2), KITH_AMEPV (P28852), KITH_ANOFW (B7GMH4), KITH_ASFB7 (P18555), KITH_ASFK5 (P0C8I3), KITH_ASFM2 (P0C8I4), KITH_ASFP4 (P0C8I5), KITH_ASFWA (P0C8I6), KITH_BACAA (C3P292), KITH_BACAC (C3LFK4), KITH_BACAH (A0RLB6), KITH_BACAN (Q81JX0), KITH_BACC0 (B7JHF2), KITH_BACC1 (Q72XC1), KITH_BACC2 (B7IQY3), KITH_BACC3 (C1F0Q7), KITH_BACC4 (B7HFM8), KITH_BACC7 (B7HY90), KITH_BACCN (A7GV80), KITH_BACCQ (B9IRW3), KITH_BACCR (Q814U0), KITH_BACCZ (Q630R8), KITH_BACHK (Q6HAV3), KITH_BACLD (Q65DU6), KITH_BACMK (A9VSC8), KITH_BACP2 (A8FID5), KITH_BACSU (Q03221), KITH_BACVZ (A7Z9S5), KITH_BDEBA (Q6MHW4), KITH_BOVIN (A5D7R8), KITH_BPT4 (P13300), KITH_CALS4 (Q8RDA1), KITH_CBEPV (Q05879), KITH_CFEPV (Q05880), KITH_CHICK (P04047), KITH_CHLAA (A9WGI6), KITH_CHLAD (B8G6Y1), KITH_CHLSY (B9LJ65), KITH_CLOAB (Q97F65), KITH_CLOB1 (A7FQF9), KITH_CLOB6 (C3KYH2), KITH_CLOBH (A5HY32), KITH_CLOBJ (C1FQ94), KITH_CLOBK (B1IE18), KITH_CLOBL (A7G9N9), KITH_CLOBM (B1KSQ8), KITH_CLOTE (Q898Y8), KITH_COLP3 (Q483R5), KITH_COPPD (B5Y8S5), KITH_COXBU (Q83A42), KITH_CRIGR (P09768), KITH_DEIDV (C1D0Z6), KITH_DICDI (Q27564), KITH_DICT6 (B5YDB0), KITH_DICTD (B8E001), KITH_ECO57 (P0A3L9), KITH_ECOL6 (Q8FHX4), KITH_ECOLI (P23331), KITH_ENTFA (Q831F5), KITH_FOWPN (P10052), KITH_GEOKA (Q5KUH1), KITH_GEOSW (C5D9N8), KITH_GEOTN (A4ITL0), KITH_HAEDU (Q7VLH2), KITH_HAEI8 (Q4QN19), KITH_HAEIN (P44309), KITH_HALH5 (Q9K6F0), KITH_HALS3 (B0R5S5), KITH_HALSA (Q9HPQ9), KITH_HALWD (Q18J88), KITH_HUMAN (P04183), KITH_IDILO (Q5QWC7), KITH_JANSC (Q28M21), KITH_LACAC (Q5FKZ1), KITH_LACJO (Q74K26), KITH_LACLA (Q9CHX5), KITH_LACPL (Q88UT1), KITH_LATSS (Q38WJ3), KITH_LEGPA (Q5X7B5), KITH_LEGPH (Q5ZXU5), KITH_LEGPL (Q5WYR3), KITH_LISIN (Q927U9), KITH_LISMF (Q71WN4), KITH_LISMO (Q8Y4A7), KITH_MACCJ (B9E8G2), KITH_MALP2 (Q8EU99), KITH_MANSM (Q65RN9), KITH_MESFL (Q6F0I2), KITH_MESH2 (Q5ZZT0), KITH_MESH7 (Q4A7B8), KITH_MESHJ (Q4A977), KITH_MIMIV (Q5UP25), KITH_MONPV (A0A7H0DN73), KITH_MONPZ (P04363), KITH_MOUSE (P04184), KITH_MYCCT (Q2SSX9), KITH_MYCGA (Q8RLE0), KITH_MYCGE (P47280), KITH_MYCM1 (Q6KH30), KITH_MYCMS (Q8VVL0), KITH_MYXVL (Q9Q8N6), KITH_MYXVU (P28851), KITH_NOVAD (Q2G5F0), KITH_OCEIH (Q8EM59), KITH_ORYSJ (O81263), KITH_PASMU (P57926), KITH_PECAS (Q6D4R3), KITH_PHOLL (Q7N457), KITH_PHOPR (Q6LT81), KITH_PSELT (A8F7B3), KITH_PYRAE (Q8ZV53), KITH_RACVI (Q90029), KITH_RFVKA (P07605), KITH_RHIEC (Q2K5N6), KITH_RHILO (Q98HR4), KITH_RHIME (Q92N38), KITH_RHOBA (Q7UFR1), KITH_RHOSI (Q9ZIG2), KITH_ROSCS (A7NI79), KITH_ROSS1 (A5UZV5), KITH_RUEPO (Q5LUY8), KITH_SALCH (Q57NR0), KITH_SALPA (Q5PCT4), KITH_SALRD (Q2RZH4), KITH_SALTI (Q8XFQ8), KITH_SALTY (Q7CQF3), KITH_SHEON (Q8ECK0), KITH_SHEVK (P16600), KITH_SHIBS (Q31ZS8), KITH_SHIDS (Q32GW8), KITH_SHIFL (P0A3M0), KITH_SHISS (Q3Z0V3), KITH_SHOC1 (Q5WB52), KITH_STAA3 (Q2FF09), KITH_STAAB (Q2YUN4), KITH_STAAC (Q5HE81), KITH_STAAM (P65230), KITH_STAAN (P65231), KITH_STAAR (Q6GEV6), KITH_STAAS (Q6G7J1), KITH_STAAW (Q8NVG5), KITH_STAEQ (Q5HMA3), KITH_STAES (Q8CRM9), KITH_STAHJ (Q4L800), KITH_STAS1 (Q49Z66), KITH_STRA1 (Q3K118), KITH_STRA3 (Q8E5C2), KITH_STRA5 (Q8DZM3), KITH_STRGC (P47848), KITH_STRMU (Q8DU63), KITH_STRP1 (Q99ZP6), KITH_STRP3 (P0DB96), KITH_STRP6 (Q5XC70), KITH_STRP8 (Q8P126), KITH_STRPM (Q48TL1), KITH_STRPN (Q97R22), KITH_STRPQ (P0DB97), KITH_STRR6 (Q8DPZ6), KITH_STRT1 (Q5M0B8), KITH_STRT2 (Q5M4W5), KITH_SWPVK (P23335), KITH_THEKO (Q5JGT7), KITH_THEMA (Q9WYN2), KITH_THEP1 (A5IK18), KITH_THEP3 (B0K7G9), KITH_THEPX (B0K1F4), KITH_THESQ (B1L989), KITH_UREP2 (B1AJN5), KITH_UREPA (Q9PPP5), KITH_UREU1 (B5ZCA9), KITH_VACCA (O57203), KITH_VACCC (P68564), KITH_VACCT (Q9JFB7), KITH_VACCW (P68563), KITH_VAR67 (P0DOM7), KITH_VARV (P0DOM8), KITH_VIBCH (Q9KST9), KITH_VIBPA (Q87QJ8), KITH_VIBVU (Q8D8R2), KITH_VIBVY (Q7MLR4), KITH_YERPE (Q8ZEJ1), KITH_YERPS (Q66AM8), KITH_YMTV5 (Q90033), KITH_ZYMMO (Q5NQ29)» more
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| UniProtKB/Swiss-Prot False negative sequences |
30 sequences
KITH_AGRFC (Q7CXF9), KITH_ALBFT (Q21Q74), KITH_AYWBP (Q2NIM1), KITH_BACFN (Q5LHP5), KITH_BACFR (Q64YL9), KITH_BACNA (O52951), KITH_BACTN (Q8A5G4), KITH_BLOFL (Q7VQZ6), KITH_BLOPB (Q492N1), KITH_CHRVO (Q7NVK0), KITH_CUTAK (Q6A8W6), KITH_DEIRA (Q9RSY5), KITH_ENCCU (O96720), KITH_FRATH (Q2A3U3), KITH_FRATT (Q5NH50), KITH_META1 (B3PM40), KITH_MYCPN (P75070), KITH_ONYPE (Q6YRB1), KITH_PHOV8 (A6L1E7), KITH_PORG3 (B2RJJ6), KITH_PORGI (Q7MVV7), KITH_PSET1 (Q3IBU5), KITH_STRAW (Q82KI9), KITH_STRCO (O50519), KITH_XANAC (Q8PEQ8), KITH_XANC8 (Q4UNV0), KITH_XANCP (Q8P3C8), KITH_XANE5 (Q3BM98), KITH_XANOM (Q2P902), KITH_XANOR (Q5H6C5)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
KITH_RAT(P27158) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
PURP_METS3 (A5UKI3) |
| PDB [Detailed view] |
14 PDB
1W4R; 1XBT; 1XX6; 2B8T; 2J87; 2J9R; 2JA1; 2ORV; 2ORW; 2QPO; 2QQ0; 2QQE; 2UZ3; 2WVJ » more |