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Entry: PS00603

General information about the entry

Entry name [info] TK_CELLULAR_TYPE
Accession [info] PS00603
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00524

Name and characterization of the entry

Description [info] Thymidine kinase cellular-type signature.
Pattern [info]
[GA]-x(1,2)-[DE]-x-Y-x-[STAPV]-x-C-[NKR]-x-[CH]-[LIVMFYWH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 186 in 186 different sequences
Number of true positive hits 185 in 185 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 30
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.46 %
Recall (true positives / (true positives + false negatives)) 86.05 %

Comments [info]

Taxonomic range [info] Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
185 sequences

KITHA_ARATH (Q9S750    ), KITHB_ARATH (F4KBF5    ), KITH_ALIF1  (Q5E4F2    ), 
KITH_AMEPV  (P28852    ), KITH_ANOFW  (B7GMH4    ), KITH_ASFB7  (P18555    ), 
KITH_ASFK5  (P0C8I3    ), KITH_ASFM2  (P0C8I4    ), KITH_ASFP4  (P0C8I5    ), 
KITH_ASFWA  (P0C8I6    ), KITH_BACAA  (C3P292    ), KITH_BACAC  (C3LFK4    ), 
KITH_BACAH  (A0RLB6    ), KITH_BACAN  (Q81JX0    ), KITH_BACC0  (B7JHF2    ), 
KITH_BACC1  (Q72XC1    ), KITH_BACC2  (B7IQY3    ), KITH_BACC3  (C1F0Q7    ), 
KITH_BACC4  (B7HFM8    ), KITH_BACC7  (B7HY90    ), KITH_BACCN  (A7GV80    ), 
KITH_BACCQ  (B9IRW3    ), KITH_BACCR  (Q814U0    ), KITH_BACCZ  (Q630R8    ), 
KITH_BACHD  (Q9K6F0    ), KITH_BACHK  (Q6HAV3    ), KITH_BACLD  (Q65DU6    ), 
KITH_BACMK  (A9VSC8    ), KITH_BACP2  (A8FID5    ), KITH_BACSK  (Q5WB52    ), 
KITH_BACSU  (Q03221    ), KITH_BACVZ  (A7Z9S5    ), KITH_BDEBA  (Q6MHW4    ), 
KITH_BOVIN  (A5D7R8    ), KITH_BPT4   (P13300    ), KITH_CALS4  (Q8RDA1    ), 
KITH_CBEPV  (Q05879    ), KITH_CFEPV  (Q05880    ), KITH_CHICK  (P04047    ), 
KITH_CHLAA  (A9WGI6    ), KITH_CHLAD  (B8G6Y1    ), KITH_CHLSY  (B9LJ65    ), 
KITH_CLOAB  (Q97F65    ), KITH_CLOB1  (A7FQF9    ), KITH_CLOB6  (C3KYH2    ), 
KITH_CLOBH  (A5HY32    ), KITH_CLOBJ  (C1FQ94    ), KITH_CLOBK  (B1IE18    ), 
KITH_CLOBL  (A7G9N9    ), KITH_CLOBM  (B1KSQ8    ), KITH_CLOTE  (Q898Y8    ), 
KITH_COLP3  (Q483R5    ), KITH_COPPD  (B5Y8S5    ), KITH_COXBU  (Q83A42    ), 
KITH_CRIGR  (P09768    ), KITH_DEIDV  (C1D0Z6    ), KITH_DICDI  (Q27564    ), 
KITH_DICT6  (B5YDB0    ), KITH_DICTD  (B8E001    ), KITH_ECO57  (P0A3L9    ), 
KITH_ECOL6  (Q8FHX4    ), KITH_ECOLI  (P23331    ), KITH_ENTFA  (Q831F5    ), 
KITH_FOWPN  (P10052    ), KITH_GEOKA  (Q5KUH1    ), KITH_GEOSW  (C5D9N8    ), 
KITH_GEOTN  (A4ITL0    ), KITH_HAEDU  (Q7VLH2    ), KITH_HAEI8  (Q4QN19    ), 
KITH_HAEIN  (P44309    ), KITH_HALS3  (B0R5S5    ), KITH_HALSA  (Q9HPQ9    ), 
KITH_HALWD  (Q18J88    ), KITH_HUMAN  (P04183    ), KITH_IDILO  (Q5QWC7    ), 
KITH_JANSC  (Q28M21    ), KITH_LACAC  (Q5FKZ1    ), KITH_LACJO  (Q74K26    ), 
KITH_LACLA  (Q9CHX5    ), KITH_LACPL  (Q88UT1    ), KITH_LACSS  (Q38WJ3    ), 
KITH_LEGPA  (Q5X7B5    ), KITH_LEGPH  (Q5ZXU5    ), KITH_LEGPL  (Q5WYR3    ), 
KITH_LISIN  (Q927U9    ), KITH_LISMF  (Q71WN4    ), KITH_LISMO  (Q8Y4A7    ), 
KITH_MACCJ  (B9E8G2    ), KITH_MANSM  (Q65RN9    ), KITH_MESFL  (Q6F0I2    ), 
KITH_MIMIV  (Q5UP25    ), KITH_MONPZ  (P04363    ), KITH_MOUSE  (P04184    ), 
KITH_MYCCT  (Q2SSX9    ), KITH_MYCGA  (Q8RLE0    ), KITH_MYCGE  (P47280    ), 
KITH_MYCH2  (Q5ZZT0    ), KITH_MYCH7  (Q4A7B8    ), KITH_MYCHJ  (Q4A977    ), 
KITH_MYCMO  (Q6KH30    ), KITH_MYCMS  (Q8VVL0    ), KITH_MYCPE  (Q8EU99    ), 
KITH_MYXVL  (Q9Q8N6    ), KITH_MYXVU  (P28851    ), KITH_NOVAD  (Q2G5F0    ), 
KITH_OCEIH  (Q8EM59    ), KITH_ORYSJ  (O81263    ), KITH_PASMU  (P57926    ), 
KITH_PECAS  (Q6D4R3    ), KITH_PHOLL  (Q7N457    ), KITH_PHOPR  (Q6LT81    ), 
KITH_PSELT  (A8F7B3    ), KITH_PYRAE  (Q8ZV53    ), KITH_RACVI  (Q90029    ), 
KITH_RFVKA  (P07605    ), KITH_RHIEC  (Q2K5N6    ), KITH_RHILO  (Q98HR4    ), 
KITH_RHIME  (Q92N38    ), KITH_RHOBA  (Q7UFR1    ), KITH_RHOSI  (Q9ZIG2    ), 
KITH_ROSCS  (A7NI79    ), KITH_ROSS1  (A5UZV5    ), KITH_RUEPO  (Q5LUY8    ), 
KITH_SALCH  (Q57NR0    ), KITH_SALPA  (Q5PCT4    ), KITH_SALRD  (Q2RZH4    ), 
KITH_SALTI  (Q8XFQ8    ), KITH_SALTY  (Q7CQF3    ), KITH_SHEON  (Q8ECK0    ), 
KITH_SHEVK  (P16600    ), KITH_SHIBS  (Q31ZS8    ), KITH_SHIDS  (Q32GW8    ), 
KITH_SHIFL  (P0A3M0    ), KITH_SHISS  (Q3Z0V3    ), KITH_STAA3  (Q2FF09    ), 
KITH_STAAB  (Q2YUN4    ), KITH_STAAC  (Q5HE81    ), KITH_STAAM  (P65230    ), 
KITH_STAAN  (P65231    ), KITH_STAAR  (Q6GEV6    ), KITH_STAAS  (Q6G7J1    ), 
KITH_STAAW  (Q8NVG5    ), KITH_STAEQ  (Q5HMA3    ), KITH_STAES  (Q8CRM9    ), 
KITH_STAHJ  (Q4L800    ), KITH_STAS1  (Q49Z66    ), KITH_STRA1  (Q3K118    ), 
KITH_STRA3  (Q8E5C2    ), KITH_STRA5  (Q8DZM3    ), KITH_STRGC  (P47848    ), 
KITH_STRMU  (Q8DU63    ), KITH_STRP1  (Q99ZP6    ), KITH_STRP3  (P0DB96    ), 
KITH_STRP6  (Q5XC70    ), KITH_STRP8  (Q8P126    ), KITH_STRPM  (Q48TL1    ), 
KITH_STRPN  (Q97R22    ), KITH_STRPQ  (P0DB97    ), KITH_STRR6  (Q8DPZ6    ), 
KITH_STRT1  (Q5M0B8    ), KITH_STRT2  (Q5M4W5    ), KITH_SWPVK  (P23335    ), 
KITH_THEKO  (Q5JGT7    ), KITH_THEMA  (Q9WYN2    ), KITH_THEP1  (A5IK18    ), 
KITH_THEP3  (B0K7G9    ), KITH_THEPX  (B0K1F4    ), KITH_THESQ  (B1L989    ), 
KITH_UREP2  (B1AJN5    ), KITH_UREPA  (Q9PPP5    ), KITH_UREU1  (B5ZCA9    ), 
KITH_VACCA  (O57203    ), KITH_VACCC  (P68564    ), KITH_VACCT  (Q9JFB7    ), 
KITH_VACCW  (P68563    ), KITH_VAR67  (P0DOM7    ), KITH_VARV   (P0DOM8    ), 
KITH_VIBCH  (Q9KST9    ), KITH_VIBPA  (Q87QJ8    ), KITH_VIBVU  (Q8D8R2    ), 
KITH_VIBVY  (Q7MLR4    ), KITH_YERPE  (Q8ZEJ1    ), KITH_YERPS  (Q66AM8    ), 
KITH_YMTV5  (Q90033    ), KITH_ZYMMO  (Q5NQ29    )
» more

UniProtKB/Swiss-Prot
False negative sequences
30 sequences

KITH_AGRFC  (Q7CXF9    ), KITH_AYWBP  (Q2NIM1    ), KITH_BACFN  (Q5LHP5    ), 
KITH_BACFR  (Q64YL9    ), KITH_BACNA  (O52951    ), KITH_BACTN  (Q8A5G4    ), 
KITH_BACV8  (A6L1E7    ), KITH_BLOFL  (Q7VQZ6    ), KITH_BLOPB  (Q492N1    ), 
KITH_CHRVO  (Q7NVK0    ), KITH_CUTAK  (Q6A8W6    ), KITH_DEIRA  (Q9RSY5    ), 
KITH_ENCCU  (O96720    ), KITH_FRATH  (Q2A3U3    ), KITH_FRATT  (Q5NH50    ), 
KITH_MYCA5  (B3PM40    ), KITH_MYCPN  (P75070    ), KITH_ONYPE  (Q6YRB1    ), 
KITH_PORG3  (B2RJJ6    ), KITH_PORGI  (Q7MVV7    ), KITH_PSEHT  (Q3IBU5    ), 
KITH_RHOFT  (Q21Q74    ), KITH_STRAW  (Q82KI9    ), KITH_STRCO  (O50519    ), 
KITH_XANAC  (Q8PEQ8    ), KITH_XANC5  (Q3BM98    ), KITH_XANC8  (Q4UNV0    ), 
KITH_XANCP  (Q8P3C8    ), KITH_XANOM  (Q2P902    ), KITH_XANOR  (Q5H6C5    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

KITH_RAT    (P27158    )

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PURP_METS3  (A5UKI3    )

		
PDB
[Detailed view]
14 PDB

1W4R; 1XBT; 1XX6; 2B8T; 2J87; 2J9R; 2JA1; 2ORV; 2ORW; 2QPO; 2QQ0; 2QQE; 2UZ3; 2WVJ
» more

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