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PROSITE entry PS00608


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General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F2_2
Accession [info] PS00608
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00531

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 2 acid/base catalyst.
Pattern [info] 
[DENQLF]-[KRVW]-N-[HRY]-[STAPV]-[SAC]-[LIVMFS]-[LIVMFSA]-[LIVMFS]-W-
[GSV]-x(2,3)-N-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 83 in 83 different sequences
Number of true positive hits 83 in 83 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 24
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 77.57 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 12
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 83 sequences 

BGA2_ECOLI  (P06864), BGAL1_ENTCL (Q47077), BGAL1_KLEP7 (A6T8X0), 

BGAL1_KLEPN (P06219), BGAL2_ENTCL (Q2XQU3), BGAL2_KLEP7 (A6TI29), 
BGAL2_KLEPN (A7KGA5), BGAL_ACTPL  (P70753), BGAL_ALTMD  (B4S2K9), 
BGAL_ARTSB  (Q59140), BGAL_CITK8  (A8AKB8), BGAL_CLOAT  (P24131), 
BGAL_CROS8  (A7MN76), BGAL_ECO24  (A7ZI91), BGAL_ECO27  (B7UJI9), 
BGAL_ECO57  (Q8X685), BGAL_ECO5E  (B5Z2P7), BGAL_ECOHS  (A7ZWZ1), 
BGAL_ECOK1  (A1A831), BGAL_ECOL5  (Q0TKT1), BGAL_ECOL6  (Q8FKG6), 
BGAL_ECOLC  (B1J0T5), BGAL_ECOLI  (P00722), BGAL_ECOLU  (B7N8Q1), 
BGAL_ECOLX  (Q8VNN2), BGAL_ECOSM  (B1LIM9), BGAL_ECOUT  (Q1RFJ2), 
BGAL_ENT38  (A4W7D2), BGAL_ENTAG  (A3FEW8), BGAL_ERWT9  (B2VHN8), 
BGAL_HALH5  (Q9K9C6), BGAL_KLEP3  (B5XQY2), BGAL_KLULA  (P00723), 
BGAL_LACAC  (O07684), BGAL_LACDA  (Q1G9Z4), BGAL_LACDE  (P0C1Y0), 
BGAL_LACHE  (Q7WTB4), BGAL_LACLA  (Q48727), BGAL_LATSK  (Q48846), 
BGAL_LEULA  (Q02603), BGAL_OENOB  (Q04F24), BGAL_PECAS  (Q6D736), 
BGAL_PHOPR  (Q6LL68), BGAL_PRIM3  (O52847), BGAL_PSEHA  (P81650), 
BGAL_PSYIN  (A1SWB8), BGAL_SALAR  (A9MQ82), BGAL_SERP5  (A8GGN3), 
BGAL_SHIDS  (Q32JB6), BGAL_SHISS  (Q3Z583), BGAL_STAXY  (O33815), 
BGAL_STRTR  (P23989), BGAL_THEMA  (Q56307), BGAL_THEP3  (P77989), 
BGAL_THETU  (P26257), BGAL_VIBC3  (A5F5U6), BGAL_VIBVU  (Q8D4H3), 
BGAL_VIBVY  (Q7MG04), BGAL_YERE8  (A1JTC4), BGAL_YERP3  (A7FH78), 
BGAL_YERPA  (Q1C6T8), BGAL_YERPB  (B2K6E6), BGAL_YERPE  (Q7CIZ3), 
BGAL_YERPG  (A9R0J8), BGAL_YERPN  (Q1CI76), BGAL_YERPP  (A4TLL5), 
BGAL_YERPS  (Q669R9), BGAL_YERPY  (B1JI86), BGH2A_BACO1 (A7LXS9), 
BGLR_CANLF  (O18835), BGLR_CHLAE  (O77695), BGLR_CLOPE  (Q8XP19), 
BGLR_ECOLI  (P05804), BGLR_FELCA  (O97524), BGLR_HUMAN  (P08236), 
BGLR_MOUSE  (P12265), BGLR_PIG(Q4FAT7), BGLR_PONAB  (Q5R5N6), 
BGLR_RAT(P06760), BGLR_STRA5  (Q8E0N2), EBM_ARATH   (Q75W54), 
EBM_LILLO   (Q5H7P5), PLH16_FORAG (T2KM09)
» more

UniProtKB/Swiss-Prot
False negative sequences		 24 sequences 

BGAC_BIFAA  (A1A3T0), BGAL_AERHH  (A0KQH4), BGAL_LEUMM  (Q03WL0), 

BGAL_RHIML  (Q59750), BGLR_BACFN  (Q5LIC7), MANBA_ASPAC (O74168), 
MANBA_ASPCL (A1CTM5), MANBA_ASPFC (B0Y7S2), MANBA_ASPFN (B8NP78), 
MANBA_ASPFU (Q4WMS9), MANBA_ASPNC (A2QWU9), MANBA_ASPOR (Q2UN00), 
MANBA_ASPTN (Q0CI48), MANBA_EMENI (Q5BCI8), MANBA_NEOFI (A1DMT2), 
MANBB_ASPCL (A1CGA8), MANBB_ASPFC (B0YBU9), MANBB_ASPFN (B8NW36), 
MANBB_ASPFU (Q4WAH4), MANBB_ASPNC (A2QYN2), MANBB_ASPOR (Q2TXB7), 
MANBB_ASPTN (Q0CCA0), MANBB_EMENI (Q5B7W2), MANBB_NEOFI (A1D911)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

BGAL_RHIRD  (P30812)


				
	

	

		PDB
[Detailed view]		
		
			84 PDB
			


			1BHG; 1DP0; 1F4A; 1F4H; 1HN1; 1JYN; 1JYV; 1JYW; 1JYX; 1JZ2; 1JZ3; 1JZ4; 
			
				1JZ5; 1JZ6; 1JZ7; 1JZ8; 1PX3; 1PX4; 3DYM; 3DYO; 3DYP; 3E1F; 3HN3; 3I3B; 
				3I3D; 3I3E; 3IAP; 3IAQ; 3J7H; 3K46; 3K4A; 3K4D; 3LPF; 3LPG; 3MUY; 3MUZ; 
				3MV0; 3MV1; 3OB8; 3OBA; 3SEP; 3T08; 3T09; 3T0A; 3T0B; 3T0D; 3T2O; 3T2P; 
				3T2Q; 4CKD; 4DUV; 4DUW; 4JHZ; 4JKK; 4JKL; 4JKM; 4TTG; 4V40; 4V41; 4V44; 
				4V45; 5A1A; 5CZK; 6CVM; 6CXS; 6DRV; 6KUZ; 6LEG; 6LEJ; 6LEL; 6LEM; 6S6Z; 
				6SD0; 6TSH; 6TSK; 6TTE; 6X1Q; 7BRS; 7BTK; 7PR6; 8BK7; 8BK8; 8BKG; 8Q7Y
			
			

			» more