Home  |  Contact
Entry: PS00608

General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F2_2
Accession [info] PS00608
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00531

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 2 acid/base catalyst.
Pattern [info] 
[DENQLF]-[KRVW]-N-[HRY]-[STAPV]-[SAC]-[LIVMFS]-[LIVMFSA]-[LIVMFS]-W-
[GSV]-x(2,3)-N-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 81 in 81 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 22
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 78.64 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 12
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 81 sequences 

BGA2_ECOLI  (P06864    ), BGAL1_ENTCL (Q47077    ), BGAL1_KLEP7 (A6T8X0    ), 

BGAL1_KLEPN (P06219    ), BGAL2_ENTCL (Q2XQU3    ), BGAL2_KLEP7 (A6TI29    ), 
BGAL2_KLEPN (A7KGA5    ), BGAL_ACTPL  (P70753    ), BGAL_ALTMD  (B4S2K9    ), 
BGAL_ARTSB  (Q59140    ), BGAL_BACHD  (Q9K9C6    ), BGAL_BACMD  (O52847    ), 
BGAL_CITK8  (A8AKB8    ), BGAL_CLOAT  (P24131    ), BGAL_CROS8  (A7MN76    ), 
BGAL_ECO24  (A7ZI91    ), BGAL_ECO27  (B7UJI9    ), BGAL_ECO57  (Q8X685    ), 
BGAL_ECO5E  (B5Z2P7    ), BGAL_ECOHS  (A7ZWZ1    ), BGAL_ECOK1  (A1A831    ), 
BGAL_ECOL5  (Q0TKT1    ), BGAL_ECOL6  (Q8FKG6    ), BGAL_ECOLC  (B1J0T5    ), 
BGAL_ECOLI  (P00722    ), BGAL_ECOLU  (B7N8Q1    ), BGAL_ECOLX  (Q8VNN2    ), 
BGAL_ECOSM  (B1LIM9    ), BGAL_ECOUT  (Q1RFJ2    ), BGAL_ENT38  (A4W7D2    ), 
BGAL_ENTAG  (A3FEW8    ), BGAL_ERWT9  (B2VHN8    ), BGAL_KLEP3  (B5XQY2    ), 
BGAL_KLULA  (P00723    ), BGAL_LACAC  (O07684    ), BGAL_LACDA  (Q1G9Z4    ), 
BGAL_LACDE  (P0C1Y0    ), BGAL_LACHE  (Q7WTB4    ), BGAL_LACLA  (Q48727    ), 
BGAL_LACSK  (Q48846    ), BGAL_LEULA  (Q02603    ), BGAL_OENOB  (Q04F24    ), 
BGAL_PECAS  (Q6D736    ), BGAL_PHOPR  (Q6LL68    ), BGAL_PSEHA  (P81650    ), 
BGAL_PSYIN  (A1SWB8    ), BGAL_SALAR  (A9MQ82    ), BGAL_SERP5  (A8GGN3    ), 
BGAL_SHIDS  (Q32JB6    ), BGAL_SHISS  (Q3Z583    ), BGAL_STAXY  (O33815    ), 
BGAL_STRTR  (P23989    ), BGAL_THEMA  (Q56307    ), BGAL_THEP3  (P77989    ), 
BGAL_THETU  (P26257    ), BGAL_VIBC3  (A5F5U6    ), BGAL_VIBVU  (Q8D4H3    ), 
BGAL_VIBVY  (Q7MG04    ), BGAL_YERE8  (A1JTC4    ), BGAL_YERP3  (A7FH78    ), 
BGAL_YERPA  (Q1C6T8    ), BGAL_YERPB  (B2K6E6    ), BGAL_YERPE  (Q7CIZ3    ), 
BGAL_YERPG  (A9R0J8    ), BGAL_YERPN  (Q1CI76    ), BGAL_YERPP  (A4TLL5    ), 
BGAL_YERPS  (Q669R9    ), BGAL_YERPY  (B1JI86    ), BGH2A_BACO1 (A7LXS9    ), 
BGLR_CANLF  (O18835    ), BGLR_CHLAE  (O77695    ), BGLR_ECOLI  (P05804    ), 
BGLR_FELCA  (O97524    ), BGLR_HUMAN  (P08236    ), BGLR_MOUSE  (P12265    ), 
BGLR_PIG    (Q4FAT7    ), BGLR_PONAB  (Q5R5N6    ), BGLR_RAT    (P06760    ), 
EBM_ARATH   (Q75W54    ), EBM_LILLO   (Q5H7P5    ), PLH16_FORAG (T2KM09    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 22 sequences 

BGAL_AERHH  (A0KQH4    ), BGAL_LEUMM  (Q03WL0    ), BGAL_RHIML  (Q59750    ), 

MANBA_ASPAC (O74168    ), MANBA_ASPCL (A1CTM5    ), MANBA_ASPFC (B0Y7S2    ), 
MANBA_ASPFN (B8NP78    ), MANBA_ASPFU (Q4WMS9    ), MANBA_ASPNC (A2QWU9    ), 
MANBA_ASPOR (Q2UN00    ), MANBA_ASPTN (Q0CI48    ), MANBA_EMENI (Q5BCI8    ), 
MANBA_NEOFI (A1DMT2    ), MANBB_ASPCL (A1CGA8    ), MANBB_ASPFC (B0YBU9    ), 
MANBB_ASPFN (B8NW36    ), MANBB_ASPFU (Q4WAH4    ), MANBB_ASPNC (A2QYN2    ), 
MANBB_ASPOR (Q2TXB7    ), MANBB_ASPTN (Q0CCA0    ), MANBB_EMENI (Q5B7W2    ), 
MANBB_NEOFI (A1D911    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

BGAL_RHIRD  (P30812    )


				
	

	

		PDB
[Detailed view]		
		
			67 PDB
			


			1BHG; 1DP0; 1F4A; 1F4H; 1HN1; 1JYN; 1JYV; 1JYW; 1JYX; 1JZ2; 1JZ3; 1JZ4; 
			
				1JZ5; 1JZ6; 1JZ7; 1JZ8; 1PX3; 1PX4; 3DYM; 3DYO; 3DYP; 3E1F; 3HN3; 3I3B; 
				3I3D; 3I3E; 3IAP; 3IAQ; 3J7H; 3K46; 3K4A; 3K4D; 3LPF; 3LPG; 3MUY; 3MUZ; 
				3MV0; 3MV1; 3OB8; 3OBA; 3SEP; 3T08; 3T09; 3T0A; 3T0B; 3T0D; 3T2O; 3T2P; 
				3T2Q; 4CKD; 4DUV; 4DUW; 4JHZ; 4TTG; 4V40; 4V41; 4V44; 4V45; 5A1A; 5CZK; 
				6CVM; 6DRV; 6S6Z; 6SD0; 6TSH; 6TSK; 6TTE
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission