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| Entry: PS00614 |
General information about the entry
| Entry name [info] | IGPS |
| Accession [info] | PS00614 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE; 12-AUG-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00536 |
Name and characterization of the entry
| Description [info] | Indole-3-glycerol phosphate synthase signature. |
| Pattern [info] |
[LIVMFY]-[LIVMC]-x-E-[LIVMFYC]-K-[KRSPQV]-[STAHKRYC]-S-P-[STRK]-x(3,7)- [LIVMFYST]. |
Numerical results [info]
| Total number of hits | 401 in 401 different sequences |
| Number of true positive hits | 399 in 399 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 2 in 2 different sequences |
| Number of false negative sequences | 7 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 99.50 % |
| Recall (true positives / (true positives + false negatives)) | 98.28 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
399 sequences
TRPC1_RALSO (Q8XVE6 ), TRPC1_STRCO (O68814 ), TRPC2_RALSO (Q8XS01 ), TRPC2_STRCO (Q9Z4X0 ), TRPC_ACAM1 (B0CEU2 ), TRPC_ACIAC (A1TJQ2 ), TRPC_ACIAD (P00911 ), TRPC_ACIB5 (B7I441 ), TRPC_ACIBC (B2HVE7 ), TRPC_ACIBS (B0VUS0 ), TRPC_ACIBT (A3M785 ), TRPC_ACIBY (B0VBS1 ), TRPC_ACIET (B9MBS5 ), TRPC_ACIF2 (B7JBC0 ), TRPC_ACIF5 (B5ERI2 ), TRPC_ACISJ (A1W2Z8 ), TRPC_AERPE (Q9Y8T7 ), TRPC_AGRFC (Q7CYR2 ), TRPC_AGRRK (B9JFD8 ), TRPC_AGRVS (B9JX64 ), TRPC_ALKMQ (A6TM74 ), TRPC_AQUAE (O67657 ), TRPC_ARATH (P49572 ), TRPC_ARCB4 (A8ET36 ), TRPC_AROAE (Q5P2G1 ), TRPC_ARTS2 (A0JVL1 ), TRPC_AZOBR (P26938 ), TRPC_AZOC5 (A8I836 ), TRPC_AZOSB (A1KAT2 ), TRPC_AZOVD (C1DHY7 ), TRPC_BACAA (C3P3T8 ), TRPC_BACAC (C3LAW0 ), TRPC_BACAH (A0RB62 ), TRPC_BACAN (Q81TM0 ), TRPC_BACC0 (B7JES8 ), TRPC_BACC1 (Q73BQ9 ), TRPC_BACC2 (B7IM74 ), TRPC_BACC3 (C1ELE8 ), TRPC_BACC4 (B7HGZ9 ), TRPC_BACC7 (B7I0F0 ), TRPC_BACCQ (B9IU36 ), TRPC_BACCR (Q81GG7 ), TRPC_BACCZ (Q63EC9 ), TRPC_BACHD (Q9KCB2 ), TRPC_BACHK (Q6HLU6 ), TRPC_BACLD (Q65I33 ), TRPC_BACMK (A9VJW0 ), TRPC_BACMQ (P70937 ), TRPC_BACP2 (A8FEK0 ), TRPC_BACPU (P18268 ), TRPC_BACSK (Q5WGS3 ), TRPC_BACSU (P03964 ), TRPC_BACTN (Q8AAD6 ), TRPC_BACVZ (A7Z618 ), TRPC_BEII9 (B2IKL7 ), TRPC_BEUC1 (C5BV85 ), TRPC_BORA1 (Q2KU99 ), TRPC_BORBR (Q7WEK6 ), TRPC_BORPA (Q7W387 ), TRPC_BORPD (A9HY11 ), TRPC_BORPE (Q7VU67 ), TRPC_BRADU (P94327 ), TRPC_BRASB (A5EK25 ), TRPC_BRASO (A4YVD6 ), TRPC_BRUA1 (B2S5Z1 ), TRPC_BRUA2 (Q2YRR4 ), TRPC_BRUAB (Q57CZ8 ), TRPC_BRUC2 (A9M5F4 ), TRPC_BRUMB (C0RJB1 ), TRPC_BRUME (P66988 ), TRPC_BRUO2 (A5VQR5 ), TRPC_BRUSI (B0CGT9 ), TRPC_BRUSU (P66989 ), TRPC_BUCAI (P57366 ), TRPC_BUCAP (P42393 ), TRPC_BUCBP (P59459 ), TRPC_BUCDN (O68427 ), TRPC_BUCSC (Q44603 ), TRPC_BURA4 (B1YSF5 ), TRPC_BURCA (Q1BSD2 ), TRPC_BURCC (B1JUU5 ), TRPC_BURCH (A0K458 ), TRPC_BURCM (Q0BIM8 ), TRPC_BURL3 (Q39JZ7 ), TRPC_BURM1 (A9AJ43 ), TRPC_BURM7 (A3MFQ4 ), TRPC_BURM9 (A2RYI3 ), TRPC_BURMA (Q62DD0 ), TRPC_BURMS (A1UWA0 ), TRPC_BURP0 (A3NZP6 ), TRPC_BURP1 (Q3JNB0 ), TRPC_BURP6 (A3NDZ3 ), TRPC_BURPS (Q63QH0 ), TRPC_BURTA (Q2SUI0 ), TRPC_BURVG (A4JB67 ), TRPC_CALS4 (Q8R9M7 ), TRPC_CAMC1 (A8Z6K1 ), TRPC_CAMC5 (A7GYQ7 ), TRPC_CAMFF (A0RNN3 ), TRPC_CAMHC (A7I2Y2 ), TRPC_CAMJ8 (A8FKS2 ), TRPC_CAMJD (A7H4P0 ), TRPC_CAMJE (Q9PI11 ), TRPC_CAMJJ (A1VYK3 ), TRPC_CAMJR (Q5HVR3 ), TRPC_CARHZ (Q3ABS1 ), TRPC_CAUSK (B0SYZ4 ), TRPC_CAUVC (Q9A727 ), TRPC_CAUVN (B8GWP9 ), TRPC_CHESB (Q11HU1 ), TRPC_CHLCH (Q3AU73 ), TRPC_CHLL2 (B3EG28 ), TRPC_CHLP8 (B3QLY7 ), TRPC_CHLPD (A1BDW1 ), TRPC_CHLPM (A4SG41 ), TRPC_CHLT3 (B3QZD6 ), TRPC_CHLTE (Q8KBW1 ), TRPC_CHRVO (Q7NUI6 ), TRPC_CLOAB (Q97EF3 ), TRPC_CLOK1 (B9E149 ), TRPC_CLOK5 (A5N7N8 ), TRPC_CORGL (P06560 ), TRPC_CROS5 (B1WQE4 ), TRPC_CUPNH (Q0K6I0 ), TRPC_CUPPJ (Q46WU7 ), TRPC_CUPTR (B3R703 ), TRPC_CYAP4 (B8HP79 ), TRPC_DECAR (Q47AC7 ), TRPC_DEHM1 (Q3Z6G5 ), TRPC_DEHMB (A5FPM3 ), TRPC_DEHMC (Q3ZZ14 ), TRPC_DEIRA (Q9RUG0 ), TRPC_DELAS (A9BS06 ), TRPC_DESOH (A8ZZX0 ), TRPC_DESRM (A4J147 ), TRPC_ECO57 (Q8X7B7 ), TRPC_ECOLI (P00909 ), TRPC_EUBE2 (C4Z138 ), TRPC_EXIS2 (B1YLS2 ), TRPC_EXISA (C4KZ66 ), TRPC_FRAAA (Q0RFX9 ), TRPC_FRASN (A8LGR8 ), TRPC_GEOKA (Q5KXU9 ), TRPC_GEOSW (C5D3D6 ), TRPC_GEOTN (A4IQ84 ), TRPC_GLOVI (Q7NHI0 ), TRPC_HAEIN (P46451 ), TRPC_HALSA (Q9HSC1 ), TRPC_HALVD (P18304 ), TRPC_HELPJ (Q9ZJU8 ), TRPC_HELPY (O25867 ), TRPC_HERAR (A4G1P4 ), TRPC_HUNT2 (A3DDS7 ), TRPC_HYPNA (Q0C1A2 ), TRPC_JANMA (A6SUH5 ), TRPC_KINRD (A6WC91 ), TRPC_KORVE (Q1ISJ1 ), TRPC_LACCA (P17217 ), TRPC_LACCB (B3W6W8 ), TRPC_LACLA (Q01999 ), TRPC_LACLM (A2RK21 ), TRPC_LACLS (Q02YB4 ), TRPC_LACP3 (Q03CY1 ), TRPC_LACP7 (A9KL43 ), TRPC_LACPL (Q88WI2 ), TRPC_LARHH (C1D7J7 ), TRPC_LEGPA (Q5X6S0 ), TRPC_LEGPC (A5IG82 ), TRPC_LEGPH (Q5ZX99 ), TRPC_LEGPL (Q5WY75 ), TRPC_LEIXX (Q6AF68 ), TRPC_LEPCP (B1Y7I2 ), TRPC_LEPIC (Q72NP6 ), TRPC_LEPIN (Q8F7V2 ), TRPC_LEUMM (Q03X00 ), TRPC_LISIN (Q92B79 ), TRPC_LISMC (C1KVS7 ), TRPC_LISMF (Q71Z38 ), TRPC_LISMH (B8DHB2 ), TRPC_LISMO (Q8Y6Q4 ), TRPC_LISW6 (A0AJ82 ), TRPC_METJA (Q58328 ), TRPC_METKA (Q8TVJ8 ), TRPC_METSB (B8EJS1 ), TRPC_METTH (O27694 ), TRPC_METTM (P26939 ), TRPC_MICAN (B0JTM2 ), TRPC_MICLC (C5CBK6 ), TRPC_MYCA1 (A0QHH0 ), TRPC_MYCA9 (B1MBV4 ), TRPC_MYCBO (P0A633 ), TRPC_MYCBP (A1KJ27 ), TRPC_MYCBT (C1ANN3 ), TRPC_MYCGI (A4T9N5 ), TRPC_MYCLB (B8ZRB9 ), TRPC_MYCLE (Q9X7C7 ), TRPC_MYCMM (B2HQX7 ), TRPC_MYCPA (Q740P4 ), TRPC_MYCS2 (A0QX95 ), TRPC_MYCSJ (A3Q119 ), TRPC_MYCSK (A1UHJ6 ), TRPC_MYCSS (Q1B7H6 ), TRPC_MYCTA (A5U2W7 ), TRPC_MYCTO (P9WFX6 ), TRPC_MYCTU (P9WFX7 ), TRPC_MYCUA (A0PP28 ), TRPC_MYCVP (A1T8X3 ), TRPC_NAUPA (B9LAF4 ), TRPC_NEIG1 (Q5F645 ), TRPC_NEIG2 (B4RPF1 ), TRPC_NEIMA (Q9JSN4 ), TRPC_NEIMB (Q9K192 ), TRPC_NEIMF (A1KRV4 ), TRPC_NITHX (Q1QMJ9 ), TRPC_NITSB (A6Q3P0 ), TRPC_NITWN (Q3SRJ3 ), TRPC_NOCSJ (A1SL44 ), TRPC_NOVAD (Q2G6R0 ), TRPC_OCEIH (Q8ESU2 ), TRPC_OCHA4 (A6X0L0 ), TRPC_OLICO (B6JG29 ), TRPC_OPITP (B1ZW79 ), TRPC_PAEAT (A1R5S7 ), TRPC_PARL1 (A7HXZ6 ), TRPC_PARP8 (B2JHI8 ), TRPC_PARPJ (B2SZ04 ), TRPC_PARXL (Q13TW4 ), TRPC_PASMU (P57855 ), TRPC_PELLD (Q3B2C7 ), TRPC_PELPB (B4SDV8 ), TRPC_PETMO (A9BHQ5 ), TRPC_PHEZH (B4RBX5 ), TRPC_PICTO (Q6L277 ), TRPC_POLAQ (A4SV52 ), TRPC_POLNA (A1VTG7 ), TRPC_POLNS (B1XSZ1 ), TRPC_POLSJ (Q123F4 ), TRPC_PROM0 (A3PED0 ), TRPC_PROM1 (A2C462 ), TRPC_PROM2 (A8G6A7 ), TRPC_PROM3 (A2CB59 ), TRPC_PROM4 (A9BBR3 ), TRPC_PROM5 (A2BY04 ), TRPC_PROM9 (Q319J2 ), TRPC_PROMA (Q7VAT3 ), TRPC_PROMM (Q7TV44 ), TRPC_PROMP (Q7TU64 ), TRPC_PROMS (A2BSL8 ), TRPC_PROMT (Q46JH4 ), TRPC_PSE14 (Q48NP7 ), TRPC_PSEA7 (A6UZF2 ), TRPC_PSEA8 (B7V609 ), TRPC_PSEAB (Q02TB5 ), TRPC_PSEAE (P20577 ), TRPC_PSEE4 (Q1IFZ9 ), TRPC_PSEF5 (Q4K503 ), TRPC_PSEFS (C3K307 ), TRPC_PSEMY (A4XZC5 ), TRPC_PSEP1 (A5VXL5 ), TRPC_PSEPF (Q3K5V4 ), TRPC_PSEPG (B0KK35 ), TRPC_PSEPK (Q88QR6 ), TRPC_PSEPU (P20578 ), TRPC_PSEPW (B1JE34 ), TRPC_PSESM (Q88A03 ), TRPC_PSEU5 (A4VHK1 ), TRPC_PYRAB (Q9V1G3 ), TRPC_PYRAE (Q8ZYX2 ), TRPC_PYRAR (A4WN19 ), TRPC_PYRFU (Q8U088 ), TRPC_PYRNV (B1YBK5 ), TRPC_RALPJ (B2UDK9 ), TRPC_RHIE6 (B3Q0L3 ), TRPC_RHIEC (Q2K879 ), TRPC_RHIL3 (Q1MGE1 ), TRPC_RHILO (Q98ME3 ), TRPC_RHILW (B5ZPY7 ), TRPC_RHIME (Q92PR9 ), TRPC_RHOBA (Q7UKJ7 ), TRPC_RHOCB (Q02584 ), TRPC_RHOFT (Q21SE8 ), TRPC_RHOJR (Q0SHZ5 ), TRPC_RHOOB (C1AT55 ), TRPC_RHOP2 (Q2IWB0 ), TRPC_RHOP5 (Q07NF6 ), TRPC_RHOPB (Q215B9 ), TRPC_RHOPS (Q136D2 ), TRPC_RHOPT (B3Q6M9 ), TRPC_RHORT (Q2RT48 ), TRPC_RHOS1 (A3PHK7 ), TRPC_RHOS4 (Q9ZFA7 ), TRPC_RHOS5 (A4WX67 ), TRPC_RHOSK (B9KMV0 ), TRPC_RIPO1 (B7K0H0 ), TRPC_ROSCS (A7NMZ8 ), TRPC_ROSS1 (A5USQ4 ), TRPC_RUMCH (B8I0V0 ), TRPC_SACEN (A4FLL0 ), TRPC_SACS2 (Q06121 ), TRPC_SALRD (Q2S1Z5 ), TRPC_SALTI (Q8Z7D9 ), TRPC_SALTY (P00910 ), TRPC_SINFN (C3MCF2 ), TRPC_SINMW (A6U9C5 ), TRPC_SPHWW (A5VBA0 ), TRPC_STAA1 (A7X234 ), TRPC_STAA2 (A6U1J2 ), TRPC_STAA3 (Q2FH66 ), TRPC_STAA8 (Q2FYR6 ), TRPC_STAA9 (A5ISQ2 ), TRPC_STAAB (Q2YXU9 ), TRPC_STAAC (Q9RL78 ), TRPC_STAAE (A6QGS2 ), TRPC_STAAM (P66990 ), TRPC_STAAN (P66991 ), TRPC_STAAR (Q6GH35 ), TRPC_STAAS (Q6G9I9 ), TRPC_STAAT (A8Z242 ), TRPC_STAAW (Q8NWU3 ), TRPC_STAEQ (Q5HPH2 ), TRPC_STAES (Q8CPB2 ), TRPC_STAHJ (Q4L677 ), TRPC_STAS1 (Q49XH6 ), TRPC_STRAW (Q82A84 ), TRPC_STRGC (A8AW03 ), TRPC_STRGG (B1W0N8 ), TRPC_STRM5 (B4SLE8 ), TRPC_STRMK (B2FKL1 ), TRPC_STRMU (Q8DVF5 ), TRPC_STRP2 (Q04IY7 ), TRPC_STRP4 (B5E7M5 ), TRPC_STRP7 (C1C968 ), TRPC_STRPI (B1I7S9 ), TRPC_STRPJ (B8ZN61 ), TRPC_STRPN (Q97P30 ), TRPC_STRPS (B2ISS3 ), TRPC_STRR6 (Q8DNM6 ), TRPC_STRSV (A3CLL9 ), TRPC_STRT1 (Q5LYI5 ), TRPC_STRT2 (Q5M348 ), TRPC_STRTD (Q03JB9 ), TRPC_STRZJ (C1CG44 ), TRPC_STRZP (C1CMD5 ), TRPC_STRZT (C1CT53 ), TRPC_SULAC (Q4J8X3 ), TRPC_SULDN (Q30SM1 ), TRPC_SULTO (Q972A1 ), TRPC_SYNE7 (Q8KPR4 ), TRPC_SYNP6 (Q5N575 ), TRPC_SYNPW (A5GMK4 ), TRPC_SYNPX (Q7TTU3 ), TRPC_SYNR3 (A5GRL0 ), TRPC_SYNS3 (Q0IC57 ), TRPC_SYNS9 (Q3AV87 ), TRPC_SYNSC (Q3AL94 ), TRPC_SYNY3 (Q55508 ), TRPC_THEAC (Q9HK02 ), TRPC_THEFY (Q47QR5 ), TRPC_THEKO (Q9YGB5 ), TRPC_THEMA (Q56319 ), TRPC_THEP3 (B0K8T4 ), TRPC_THEPX (B0K2U1 ), TRPC_THEVO (Q979V9 ), TRPC_THIDA (Q3SGS2 ), TRPC_TRIEI (Q10ZM7 ), TRPC_UNCTG (B1GZC0 ), TRPC_VARPS (C5CKE4 ), TRPC_VEREI (A1WH73 ), TRPC_VIBCH (Q9KST5 ), TRPC_VIBPA (P22098 ), TRPC_WOLSU (Q7M831 ), TRPC_XANAC (Q8PQ47 ), TRPC_XANC5 (Q3BYB5 ), TRPC_XANC8 (Q4UZF8 ), TRPC_XANCP (Q8PD70 ), TRPC_XANOM (Q2NYD7 ), TRPC_XANOP (B2SL03 ), TRPC_XANP2 (A7INK2 ), TRPC_XYLF2 (B2I6S5 ), TRPC_XYLFA (Q9PGT5 ), TRPC_XYLFM (B0U1P0 ), TRPC_XYLFT (Q87EX2 ), TRPC_YERPE (Q8ZEG8 ), TRPC_ZYMMO (Q5NQ36 ), TRPC_ZYMMT (Q9XBM3 ), TRPG_ASPAW (P18483 ), TRPG_ASPNG (P05328 ), TRPG_COCHE (Q92411 ), TRPG_CRYNB (P0CN87 ), TRPG_CRYNH (P27710 ), TRPG_CRYNJ (P0CN86 ), TRPG_EMENI (P06531 ), TRPG_NEUCR (P00908 ), TRPG_PENCH (P24773 ), TRPG_PHACH (P25170 ), TRPG_PHYBL (P20409 ), TRPG_PICAN (P09575 ), TRPG_SCHPO (Q92370 ), TRPG_YEAST (P00937 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
7 sequences
TRPC_DESPS (Q6AMS4 ), TRPC_DICNV (A5EVG3 ), TRPC_HALMA (Q5V138 ), TRPC_MAGMM (A0LA39 ), TRPC_METS5 (A4YHD8 ), TRPC_PHYPR (P24920 ), TRPC_SYNFM (A0LJ58 )» more |
| UniProtKB/Swiss-Prot False positive sequences |
2 sequences
OBG_PSYIN (A1SSB6 ), RT07_SCHPO (O13744 ) |
| PDB [Detailed view] |
23 PDB
1A53; 1I4N; 1IGS; 1J5T; 1JCM; 1JUK; 1JUL; 1LBF; 1LBL; 1PII; 2C3Z; 3QJA; 3T40; 3T44; 3T55; 3T78; 3TC6; 3TSM; 4FB7; 4IWW; 4IX0; 5K7J; 6BMA » more |
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