Due to maintenance work, this service will be unavailable from
Mon Nov 11 17:30 until
Tue Nov 12 09:00
CET.
Apologies for the inconvenience.
PROSITE entry PS00623
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | GMC_OXRED_1 |
| Accession [info] | PS00623 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00543 |
Name and characterization of the entry
| Description [info] | GMC oxidoreductases signature 1. |
| Pattern [info] |
[GA]-[RKNC]-x-[LIVW]-G(2)-[GST](2)-x-[LIVM]-[NH]-x(3)-[FYWA]-x(2)-[PAG]- x(5)-[DNESHQA]. |
Numerical results [info]
| Total number of hits | 158 in 158 different sequences |
| Number of true positive hits | 158 in 158 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 45 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 77.83 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
158 sequences
ALKJ_PSEOL (Q00593), ALKJ_PSEPU (Q9WWW2), ALOX1_KOMPC (F2QY27), ALOX1_KOMPG (P04842), ALOX2_KOMPC (F2R038), ALOX2_KOMPG (C4R702), ALOX_CANBO (Q00922), ALOX_PICAN (P04841), ASC9_DIDFA (A0A5C1RDA6), BETA1_CHRSD (Q1QXE1), BETA2_CHRSD (Q9L4K0), BETA_ACIAD (Q6FDF9), BETA_ACIB3 (B7GYG5), BETA_ACIB5 (B7I895), BETA_ACIBC (B2HV79), BETA_ACIBS (B0VST3), BETA_ACIBY (B0V945), BETA_AGRFC (Q8UH55), BETA_BRUA4 (A6X2G7), BETA_BRUC2 (A9M9H8), BETA_BRUME (Q8YFY2), BETA_BRUO2 (A5VPA6), BETA_BRUSI (B0CKN4), BETA_BRUSU (Q8G1Z8), BETA_BURA4 (B1Z034), BETA_BURCH (A0B2F7), BETA_BURCJ (B4EHJ2), BETA_BURCM (Q0B711), BETA_BURL3 (Q39A44), BETA_BURM1 (A9AMZ9), BETA_BURMA (Q62CH8), BETA_BURO0 (B1K707), BETA_BURO1 (Q1BQE2), BETA_BURP1 (Q3JLL7), BETA_BURPS (Q63KK7), BETA_BURTA (Q2T6D0), BETA_BURVG (A4JJG6), BETA_CITK8 (A8AJN0), BETA_CROS8 (A7MFA8), BETA_ECO24 (A7ZI50), BETA_ECO27 (B7UJG4), BETA_ECO45 (B7MCD0), BETA_ECO55 (B7L439), BETA_ECO57 (Q8X6C6), BETA_ECO5E (B5Z1R0), BETA_ECO8A (B7M2V5), BETA_ECODH (B1XE52), BETA_ECOHS (A7ZWV4), BETA_ECOL5 (Q0TKW1), BETA_ECOL6 (Q8FKI9), BETA_ECOLC (B1J0W6), BETA_ECOLI (P17444), BETA_ECOLU (B7N8L3), BETA_ECOSE (B6I074), BETA_ECOSM (B1LIJ7), BETA_ECOUT (Q1RFM3), BETA_KLEP3 (B5Y008), BETA_KLEP7 (A6T613), BETA_PARP8 (B2JS89), BETA_PARPJ (B2TCJ8), BETA_PARXL (Q13NG7), BETA_PECAS (Q6D6D9), BETA_PECCP (C6DKY4), BETA_PHOPR (Q6LGH5), BETA_PROMH (B4EX94), BETA_PSE14 (Q48CM7), BETA_PSEA7 (A6VEI3), BETA_PSEA8 (B7V5R3), BETA_PSEAB (Q02DZ0), BETA_PSEAE (Q9HTJ2), BETA_PSEE4 (Q1IG70), BETA_PSEF5 (Q4K4K7), BETA_PSEFS (C3K3D3), BETA_PSEMY (A4XPI5), BETA_PSEP1 (A5WA97), BETA_PSEPF (Q3K5H3), BETA_PSEPG (B0KN19), BETA_PSEPK (Q88CW6), BETA_PSESM (Q88AE7), BETA_PSEU2 (Q4ZM63), BETA_RHIE6 (B3PTE0), BETA_RHIEC (Q2KB43), BETA_RHIJ3 (Q1MJU4), BETA_RHILO (Q985M5), BETA_RHILW (B5ZUG2), BETA_RHIME (P54223), BETA_RHIR8 (B9JBA2), BETA_SERP5 (A8GBX9), BETA_SHIF8 (Q0T7N0), BETA_SINFN (C3MIE4), BETA_SINMW (A6U6Y8), BETA_STAA1 (A7X6Z3), BETA_STAA2 (A6U4Z2), BETA_STAA3 (Q2FDP9), BETA_STAA8 (Q2FV11), BETA_STAA9 (A5IW37), BETA_STAAB (Q2YWJ5), BETA_STAAC (Q5HCU1), BETA_STAAE (A6QK99), BETA_STAAM (P60336), BETA_STAAN (P60337), BETA_STAAR (Q6GDJ1), BETA_STAAS (Q6G664), BETA_STAAT (A8Z5A4), BETA_STAAW (Q8NUM0), BETA_STAEQ (Q5HL11), BETA_STAES (Q8CMY2), BETA_STAHJ (Q4L9D7), BETA_STAS1 (Q4A0Q1), BETA_STAXY (Q9X2M2), BETA_STRM5 (B4SHV9), BETA_STRMK (B2FQ89), BETA_VIBC1 (A7N2P9), BETA_VIBVU (Q8D3K2), BETA_VIBVY (Q7MF12), BETA_XANAC (Q8PPG8), BETA_XANC8 (Q4UYN5), BETA_XANCB (B0RNU9), BETA_XANCP (Q8P5D7), BETA_XANE5 (Q3BXK8), BETA_YERP3 (A7FKL6), BETA_YERPA (Q1C932), BETA_YERPB (B2K8U4), BETA_YERPE (Q8ZGW0), BETA_YERPN (Q1CFR7), BETA_YERPP (A4TNP2), BETA_YERPS (Q66D54), BETA_YERPY (B1JSR0), CDH_PHACH (Q01738), CHDH_HUMAN (Q8NE62), CHDH_MOUSE (Q8BJ64), CHDH_RAT(Q6UPE0), CHOD_BREST (P22637), CHOD_STRS0 (P12676), CITC_MONPU (A0A142PTM2), CITC_MONRU (A0A161CEV4), DHGL_DROME (P18173), DHGL_DROPS (P18172), EO_BOMMO(H6AGY0), ERIK_HERER (P0DO29), GMCH_MALS4 (M5EAX2), GMCH_MALSM (Q5GMY3), GOX_ASPNG (P13006), GOX_PENAG (P81156), GOX_TALFL (Q92452), MDL1_PRUDU (O24243), MDL1_PRUSE (P52706), MDL2_PRUDU (Q945K2), MDL2_PRUSE (O50048), MDL3_PRUSE (P52707), MDLL_ARATH (Q9SSM2), PNO_MICLT (Q9AJD6), SDH_GLUOY (Q47944), Y1279_MYCTO (P9WMV4), Y1279_MYCTU (P9WMV5), Y1310_MYCBO (P64264), Y4NJ_SINFN (P55582), YTH2_RHOER (P46371)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
45 sequences
4PADH_RHILO (Q988C9), AFLK_ASPPU (Q12062), CGLYO_ARTG1 (H0QPM2), CGLYO_MICSX (P0DXE4), CGLYO_MICTR (A0A0M2HFA3), CHOD_MYCTO (P9WMV8), CHOD_MYCTU (P9WMV9), CHOX_ARTGO (Q7X2H8), FAO1_ARATH (Q9ZWB9), FAO1_LOTJA (B5WWZ8), FAO2_LOTJA (B5WWZ9), FAO3_ARATH (Q9LW56), FAO4A_ARATH (O65709), FAO4B_ARATH (Q94BP3), FAP_CHLRE (A8JHB7), FAP_CHLVA (A0A248QE08), FDHL_GLUJA (M1VMF7), GADH1_PANCY (O34214), HTH_ARATH (Q9S746), LIVQ_STRLV (Q2MF66), MDL4_PRUSE (O82784), MPDB_MYCAO (Q3YAT3), NEOG_STRFR (Q53U15), NINAG_DROME (Q9VGP2), P2OX_EMENI (Q5B2E9), P2OX_LYOSH (Q75ZP8), P2OX_PENSG (Q8J136), P2OX_PHACH (Q6QWR1), P2OX_PHLGI (Q6UG02), P2OX_TRAHI (P59097), P2OX_TRAPU (Q5G234), P2OX_TRAVE (P79076), P2OX_TRIMT (Q8J2V8), PDH1_AGABI (Q3L1D1), PDH1_AGACM (V5NDL4), PDH1_AGAXA (V5NC32), PDH1_LEUMG (Q3L245), PDH2_LEUMG (Q3L243), PDH3_LEUMG (Q0R4L2), Y492_MYCTO (P9WMV6), Y492_MYCTU (P9WMV7), YL128_MIMIV (Q5UPK7), YL894_MIMIV (Q5UQZ1), YR135_MIMIV (Q5UPL2), YR832_MIMIV (Q5UQH9)» more |
| PDB [Detailed view] |
46 PDB
1B4V; 1B8S; 1CBO; 1CC2; 1CF3; 1COY; 1GAL; 1GPE; 1IJH; 1JU2; 1KDG; 1MXT; 1N1P; 1N4U; 1N4V; 1N4W; 1NAA; 2GEW; 3B3R; 3B6D; 3CNJ; 3COX; 3GDN; 3GDP; 3GYI; 3GYJ; 3QVP; 3QVR; 4REK; 4U2L; 4U2S; 4U2T; 4XWR; 4XXG; 5EB4; 5EB5; 5HSA; 5I68; 5KWF; 5NIT; 5NIW; 6JBY; 6LQY; 6LR8; 7BWP; 7CGS » more |