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| Entry: PS00623 |
General information about the entry
| Entry name [info] | GMC_OXRED_1 |
| Accession [info] | PS00623 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE; 12-AUG-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00543 |
Name and characterization of the entry
| Description [info] | GMC oxidoreductases signature 1. |
| Pattern [info] |
[GA]-[RKNC]-x-[LIVW]-G(2)-[GST](2)-x-[LIVM]-[NH]-x(3)-[FYWA]-x(2)-[PAG]- x(5)-[DNESHQA]. |
Numerical results [info]
| Total number of hits | 156 in 156 different sequences |
| Number of true positive hits | 156 in 156 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 42 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 78.79 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
156 sequences
ALKJ_PSEOL (Q00593 ), ALKJ_PSEPU (Q9WWW2 ), ALOX1_KOMPC (F2QY27 ), ALOX1_KOMPG (P04842 ), ALOX2_KOMPC (F2R038 ), ALOX2_KOMPG (C4R702 ), ALOX_CANBO (Q00922 ), ALOX_PICAN (P04841 ), ASC9_DIDFA (A0A5C1RDA6), BETA1_CHRSD (Q1QXE1 ), BETA2_CHRSD (Q9L4K0 ), BETA_ACIAD (Q6FDF9 ), BETA_ACIB3 (B7GYG5 ), BETA_ACIB5 (B7I895 ), BETA_ACIBC (B2HV79 ), BETA_ACIBS (B0VST3 ), BETA_ACIBY (B0V945 ), BETA_AGRFC (Q8UH55 ), BETA_AGRRK (B9JBA2 ), BETA_BRUC2 (A9M9H8 ), BETA_BRUME (Q8YFY2 ), BETA_BRUO2 (A5VPA6 ), BETA_BRUSI (B0CKN4 ), BETA_BRUSU (Q8G1Z8 ), BETA_BURA4 (B1Z034 ), BETA_BURCA (Q1BQE2 ), BETA_BURCC (B1K707 ), BETA_BURCH (A0B2F7 ), BETA_BURCJ (B4EHJ2 ), BETA_BURCM (Q0B711 ), BETA_BURL3 (Q39A44 ), BETA_BURM1 (A9AMZ9 ), BETA_BURMA (Q62CH8 ), BETA_BURP1 (Q3JLL7 ), BETA_BURPS (Q63KK7 ), BETA_BURTA (Q2T6D0 ), BETA_BURVG (A4JJG6 ), BETA_CITK8 (A8AJN0 ), BETA_CROS8 (A7MFA8 ), BETA_ECO24 (A7ZI50 ), BETA_ECO27 (B7UJG4 ), BETA_ECO45 (B7MCD0 ), BETA_ECO55 (B7L439 ), BETA_ECO57 (Q8X6C6 ), BETA_ECO5E (B5Z1R0 ), BETA_ECO8A (B7M2V5 ), BETA_ECODH (B1XE52 ), BETA_ECOHS (A7ZWV4 ), BETA_ECOL5 (Q0TKW1 ), BETA_ECOL6 (Q8FKI9 ), BETA_ECOLC (B1J0W6 ), BETA_ECOLI (P17444 ), BETA_ECOLU (B7N8L3 ), BETA_ECOSE (B6I074 ), BETA_ECOSM (B1LIJ7 ), BETA_ECOUT (Q1RFM3 ), BETA_KLEP3 (B5Y008 ), BETA_KLEP7 (A6T613 ), BETA_OCHA4 (A6X2G7 ), BETA_PARP8 (B2JS89 ), BETA_PARPJ (B2TCJ8 ), BETA_PARXL (Q13NG7 ), BETA_PECAS (Q6D6D9 ), BETA_PECCP (C6DKY4 ), BETA_PHOPR (Q6LGH5 ), BETA_PROMH (B4EX94 ), BETA_PSE14 (Q48CM7 ), BETA_PSEA7 (A6VEI3 ), BETA_PSEA8 (B7V5R3 ), BETA_PSEAB (Q02DZ0 ), BETA_PSEAE (Q9HTJ2 ), BETA_PSEE4 (Q1IG70 ), BETA_PSEF5 (Q4K4K7 ), BETA_PSEFS (C3K3D3 ), BETA_PSEMY (A4XPI5 ), BETA_PSEP1 (A5WA97 ), BETA_PSEPF (Q3K5H3 ), BETA_PSEPG (B0KN19 ), BETA_PSEPK (Q88CW6 ), BETA_PSESM (Q88AE7 ), BETA_PSEU2 (Q4ZM63 ), BETA_RHIE6 (B3PTE0 ), BETA_RHIEC (Q2KB43 ), BETA_RHIL3 (Q1MJU4 ), BETA_RHILO (Q985M5 ), BETA_RHILW (B5ZUG2 ), BETA_RHIME (P54223 ), BETA_SERP5 (A8GBX9 ), BETA_SHIF8 (Q0T7N0 ), BETA_SINFN (C3MIE4 ), BETA_SINMW (A6U6Y8 ), BETA_STAA1 (A7X6Z3 ), BETA_STAA2 (A6U4Z2 ), BETA_STAA3 (Q2FDP9 ), BETA_STAA8 (Q2FV11 ), BETA_STAA9 (A5IW37 ), BETA_STAAB (Q2YWJ5 ), BETA_STAAC (Q5HCU1 ), BETA_STAAE (A6QK99 ), BETA_STAAM (P60336 ), BETA_STAAN (P60337 ), BETA_STAAR (Q6GDJ1 ), BETA_STAAS (Q6G664 ), BETA_STAAT (A8Z5A4 ), BETA_STAAW (Q8NUM0 ), BETA_STAEQ (Q5HL11 ), BETA_STAES (Q8CMY2 ), BETA_STAHJ (Q4L9D7 ), BETA_STAS1 (Q4A0Q1 ), BETA_STAXY (Q9X2M2 ), BETA_STRM5 (B4SHV9 ), BETA_STRMK (B2FQ89 ), BETA_VIBCB (A7N2P9 ), BETA_VIBVU (Q8D3K2 ), BETA_VIBVY (Q7MF12 ), BETA_XANAC (Q8PPG8 ), BETA_XANC5 (Q3BXK8 ), BETA_XANC8 (Q4UYN5 ), BETA_XANCB (B0RNU9 ), BETA_XANCP (Q8P5D7 ), BETA_YERP3 (A7FKL6 ), BETA_YERPA (Q1C932 ), BETA_YERPB (B2K8U4 ), BETA_YERPE (Q8ZGW0 ), BETA_YERPN (Q1CFR7 ), BETA_YERPP (A4TNP2 ), BETA_YERPS (Q66D54 ), BETA_YERPY (B1JSR0 ), CDH_PHACH (Q01738 ), CHDH_HUMAN (Q8NE62 ), CHDH_MOUSE (Q8BJ64 ), CHDH_RAT (Q6UPE0 ), CHOD_BREST (P22637 ), CHOD_STRS0 (P12676 ), CITC_MONPU (A0A142PTM2), CITC_MONRU (A0A161CEV4), DHGL_DROME (P18173 ), DHGL_DROPS (P18172 ), GMCH_MALS4 (M5EAX2 ), GMCH_MALSM (Q5GMY3 ), GOX_ASPNG (P13006 ), GOX_PENAG (P81156 ), GOX_TALFL (Q92452 ), MDL1_PRUDU (O24243 ), MDL1_PRUSE (P52706 ), MDL2_PRUDU (Q945K2 ), MDL2_PRUSE (O50048 ), MDL3_PRUSE (P52707 ), MDLL_ARATH (Q9SSM2 ), PNO_MICLT (Q9AJD6 ), SDH_GLUOY (Q47944 ), Y1279_MYCTO (P9WMV4 ), Y1279_MYCTU (P9WMV5 ), Y1310_MYCBO (P64264 ), Y4NJ_SINFN (P55582 ), YTH2_RHOER (P46371 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
42 sequences
4PADH_RHILO (Q988C9 ), AFLK_ASPPU (Q12062 ), CHOD_MYCTO (P9WMV8 ), CHOD_MYCTU (P9WMV9 ), CHOX_ARTGO (Q7X2H8 ), FAO1_ARATH (Q9ZWB9 ), FAO1_LOTJA (B5WWZ8 ), FAO2_LOTJA (B5WWZ9 ), FAO3_ARATH (Q9LW56 ), FAO4A_ARATH (O65709 ), FAO4B_ARATH (Q94BP3 ), FAP_CHLRE (A8JHB7 ), FAP_CHLVA (A0A248QE08), FDHL_GLUJA (M1VMF7 ), GADH1_PANCY (O34214 ), HTH_ARATH (Q9S746 ), LIVQ_STRLV (Q2MF66 ), MDL4_PRUSE (O82784 ), MPDB_MYCAO (Q3YAT3 ), NEOG_STRFR (Q53U15 ), NINAG_DROME (Q9VGP2 ), P2OX_EMENI (Q5B2E9 ), P2OX_LYOSH (Q75ZP8 ), P2OX_PENSG (Q8J136 ), P2OX_PHACH (Q6QWR1 ), P2OX_PHLGI (Q6UG02 ), P2OX_TRAHI (P59097 ), P2OX_TRAPU (Q5G234 ), P2OX_TRAVE (P79076 ), P2OX_TRIMT (Q8J2V8 ), PDH1_AGABI (Q3L1D1 ), PDH1_AGACM (V5NDL4 ), PDH1_AGAXA (V5NC32 ), PDH1_LEUMG (Q3L245 ), PDH2_LEUMG (Q3L243 ), PDH3_LEUMG (Q0R4L2 ), Y492_MYCTO (P9WMV6 ), Y492_MYCTU (P9WMV7 ), YL128_MIMIV (Q5UPK7 ), YL894_MIMIV (Q5UQZ1 ), YR135_MIMIV (Q5UPL2 ), YR832_MIMIV (Q5UQH9 )» more |
| PDB [Detailed view] |
41 PDB
1B4V; 1B8S; 1CBO; 1CC2; 1CF3; 1COY; 1GAL; 1GPE; 1IJH; 1JU2; 1KDG; 1MXT; 1N1P; 1N4U; 1N4V; 1N4W; 1NAA; 2GEW; 3B3R; 3B6D; 3CNJ; 3COX; 3GDN; 3GDP; 3GYI; 3GYJ; 3QVP; 3QVR; 4REK; 4U2L; 4U2S; 4U2T; 4XWR; 4XXG; 5EB4; 5EB5; 5HSA; 5I68; 5KWF; 5NIT; 5NIW » more |
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