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PROSITE entry PS00624


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General information about the entry

Entry name [info] GMC_OXRED_2
Accession [info] PS00624
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00543

Name and characterization of the entry

Description [info] GMC oxidoreductases signature 2.
Pattern [info]
[GS]-[PSTA]-x(2)-[ST]-[PS]-x-[LIVM](2)-x(2)-S-G-[LIVM]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 169 in 169 different sequences
Number of true positive hits 168 in 168 different sequences
Number of 'unknown' hits 1
Number of false positive hits 0
Number of false negative sequences 36
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.35 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
168 sequences

ACUG_ASPA1  (A0A1L9WN49), ALKJ_PSEOL  (Q00593), ALKJ_PSEPU  (Q9WWW2), 
ALOX_CANBO  (Q00922), ALOX_PICAN  (P04841), ARMD5_ARMGA (A0A2H3D1U1), 
ASC9_DIDFA  (A0A5C1RDA6), BETA1_CHRSD (Q1QXE1), BETA2_CHRSD (Q9L4K0), 
BETA_ACIAD  (Q6FDF9), BETA_ACIB3  (B7GYG5), BETA_ACIB5  (B7I895), 
BETA_ACIBC  (B2HV79), BETA_ACIBS  (B0VST3), BETA_ACIBY  (B0V945), 
BETA_AGRFC  (Q8UH55), BETA_BRUA4  (A6X2G7), BETA_BRUC2  (A9M9H8), 
BETA_BRUME  (Q8YFY2), BETA_BRUO2  (A5VPA6), BETA_BRUSI  (B0CKN4), 
BETA_BRUSU  (Q8G1Z8), BETA_BURA4  (B1Z034), BETA_BURCH  (A0B2F7), 
BETA_BURCJ  (B4EHJ2), BETA_BURCM  (Q0B711), BETA_BURL3  (Q39A44), 
BETA_BURM1  (A9AMZ9), BETA_BURMA  (Q62CH8), BETA_BURO0  (B1K707), 
BETA_BURO1  (Q1BQE2), BETA_BURP1  (Q3JLL7), BETA_BURPS  (Q63KK7), 
BETA_BURTA  (Q2T6D0), BETA_BURVG  (A4JJG6), BETA_CITK8  (A8AJN0), 
BETA_CROS8  (A7MFA8), BETA_ECO24  (A7ZI50), BETA_ECO27  (B7UJG4), 
BETA_ECO45  (B7MCD0), BETA_ECO55  (B7L439), BETA_ECO57  (Q8X6C6), 
BETA_ECO5E  (B5Z1R0), BETA_ECO8A  (B7M2V5), BETA_ECODH  (B1XE52), 
BETA_ECOHS  (A7ZWV4), BETA_ECOL5  (Q0TKW1), BETA_ECOL6  (Q8FKI9), 
BETA_ECOLC  (B1J0W6), BETA_ECOLI  (P17444), BETA_ECOLU  (B7N8L3), 
BETA_ECOSE  (B6I074), BETA_ECOSM  (B1LIJ7), BETA_ECOUT  (Q1RFM3), 
BETA_KLEP3  (B5Y008), BETA_KLEP7  (A6T613), BETA_PARP8  (B2JS89), 
BETA_PARPJ  (B2TCJ8), BETA_PARXL  (Q13NG7), BETA_PECAS  (Q6D6D9), 
BETA_PECCP  (C6DKY4), BETA_PHOPR  (Q6LGH5), BETA_PROMH  (B4EX94), 
BETA_PSE14  (Q48CM7), BETA_PSEA7  (A6VEI3), BETA_PSEA8  (B7V5R3), 
BETA_PSEAB  (Q02DZ0), BETA_PSEAE  (Q9HTJ2), BETA_PSEE4  (Q1IG70), 
BETA_PSEF5  (Q4K4K7), BETA_PSEFS  (C3K3D3), BETA_PSEMY  (A4XPI5), 
BETA_PSEP1  (A5WA97), BETA_PSEPF  (Q3K5H3), BETA_PSEPG  (B0KN19), 
BETA_PSEPK  (Q88CW6), BETA_PSESM  (Q88AE7), BETA_PSEU2  (Q4ZM63), 
BETA_RHIE6  (B3PTE0), BETA_RHIEC  (Q2KB43), BETA_RHIJ3  (Q1MJU4), 
BETA_RHILO  (Q985M5), BETA_RHILW  (B5ZUG2), BETA_RHIME  (P54223), 
BETA_RHIR8  (B9JBA2), BETA_SERP5  (A8GBX9), BETA_SHIF8  (Q0T7N0), 
BETA_SINFN  (C3MIE4), BETA_SINMW  (A6U6Y8), BETA_STAA1  (A7X6Z3), 
BETA_STAA2  (A6U4Z2), BETA_STAA3  (Q2FDP9), BETA_STAA8  (Q2FV11), 
BETA_STAA9  (A5IW37), BETA_STAAB  (Q2YWJ5), BETA_STAAC  (Q5HCU1), 
BETA_STAAE  (A6QK99), BETA_STAAM  (P60336), BETA_STAAN  (P60337), 
BETA_STAAR  (Q6GDJ1), BETA_STAAS  (Q6G664), BETA_STAAT  (A8Z5A4), 
BETA_STAAW  (Q8NUM0), BETA_STAEQ  (Q5HL11), BETA_STAES  (Q8CMY2), 
BETA_STAHJ  (Q4L9D7), BETA_STAS1  (Q4A0Q1), BETA_STAXY  (Q9X2M2), 
BETA_STRM5  (B4SHV9), BETA_STRMK  (B2FQ89), BETA_XANAC  (Q8PPG8), 
BETA_XANC8  (Q4UYN5), BETA_XANCB  (B0RNU9), BETA_XANCP  (Q8P5D7), 
BETA_XANE5  (Q3BXK8), BETA_YERP3  (A7FKL6), BETA_YERPA  (Q1C932), 
BETA_YERPB  (B2K8U4), BETA_YERPE  (Q8ZGW0), BETA_YERPN  (Q1CFR7), 
BETA_YERPP  (A4TNP2), BETA_YERPS  (Q66D54), BETA_YERPY  (B1JSR0), 
CDH_PHACH   (Q01738), CHDH_HUMAN  (Q8NE62), CHDH_MOUSE  (Q8BJ64), 
CHDH_RAT(Q6UPE0), CHOX_ARTGO  (Q7X2H8), CICC_EMENI  (A0A1U8QYA8), 
CITC_MONPU  (A0A142PTM2), CITC_MONRU  (A0A161CEV4), DHGL_DROME  (P18173), 
DHGL_DROPS  (P18172), EO_BOMMO(H6AGY0), EO_SPOLI(Q95NZ0), 
ERIK_HERER  (P0DO29), FAP_CHLRE   (A8JHB7), FAP_CHLVA   (A0A248QE08), 
GMCH_MALS4  (M5EAX2), GMCH_MALSM  (Q5GMY3), GME62_PESMI (A0A5B8YW44), 
GOX_ASPNG   (P13006), GOX_PENAG   (P81156), GOX_TALFL   (Q92452), 
HTH_ARATH   (Q9S746), MDL1_PRUDU  (O24243), MDL1_PRUSE  (P52706), 
MDL2_PRUDU  (Q945K2), MDL2_PRUSE  (O50048), MDL3_PRUSE  (P52707), 
MDL4_PRUSE  (O82784), MDLL_ARATH  (Q9SSM2), PATE_ASPCL  (A1CFL2), 
PATE_PENEN  (A0A075TRK9), PKFF_EMENI  (Q5B8A1), PNO_MICLT   (Q9AJD6), 
SDH_GLUOY   (Q47944), XPTC_EMENI  (Q5AUN2), Y1279_MYCTO (P9WMV4), 
Y1279_MYCTU (P9WMV5), Y1310_MYCBO (P64264), Y492_MYCTO  (P9WMV6), 
Y492_MYCTU  (P9WMV7), YL128_MIMIV (Q5UPK7), YL894_MIMIV (Q5UQZ1), 
YR135_MIMIV (Q5UPL2), YR832_MIMIV (Q5UQH9), YTH2_RHOER  (P46371)
» more

UniProtKB/Swiss-Prot
False negative sequences
36 sequences

4PADH_RHILO (Q988C9), AFLK_ASPPU  (Q12062), BETA_VIBC1  (A7N2P9), 
BETA_VIBVU  (Q8D3K2), BETA_VIBVY  (Q7MF12), CHOD_BREST  (P22637), 
CHOD_MYCTO  (P9WMV8), CHOD_MYCTU  (P9WMV9), CHOD_STRS0  (P12676), 
FAO1_ARATH  (Q9ZWB9), FAO1_LOTJA  (B5WWZ8), FAO2_LOTJA  (B5WWZ9), 
FAO3_ARATH  (Q9LW56), FAO4A_ARATH (O65709), FAO4B_ARATH (Q94BP3), 
FDHL_GLUJA  (M1VMF7), GADH1_PANCY (O34214), LIVQ_STRLV  (Q2MF66), 
MPDB_MYCAO  (Q3YAT3), NEOG_STRFR  (Q53U15), NINAG_DROME (Q9VGP2), 
P2OX_EMENI  (Q5B2E9), P2OX_LYOSH  (Q75ZP8), P2OX_PENSG  (Q8J136), 
P2OX_PHACH  (Q6QWR1), P2OX_PHLGI  (Q6UG02), P2OX_TRAHI  (P59097), 
P2OX_TRAPU  (Q5G234), P2OX_TRAVE  (P79076), P2OX_TRIMT  (Q8J2V8), 
PDH1_AGABI  (Q3L1D1), PDH1_AGACM  (V5NDL4), PDH1_AGAXA  (V5NC32), 
PDH1_LEUMG  (Q3L245), PDH2_LEUMG  (Q3L243), PDH3_LEUMG  (Q0R4L2)
» more

UniProtKB/Swiss-Prot
'Unknown' sequences
1 sequence

NEC3_NESMA  (P0DO52)

		
PDB
[Detailed view]
41 PDB

1CF3; 1GAL; 1GPE; 1JU2; 1KDG; 1NAA; 2JBV; 3GDN; 3GDP; 3LJP; 3NNE; 3QVP; 3QVR; 4MJW; 4Z24; 4Z25; 4Z26; 5EB4; 5EB5; 5NCC; 5NIT; 5NIW; 6JBY; 6LQY; 6LR8; 6YRU; 6YRV; 6YRX; 6YRZ; 6YS1; 6YS2; 6ZH7; 7AV4; 7BWP; 7CGS; 7R33; 7R34; 7R35; 7R36; 7YX3; 8BXL
» more