PROSITE entry PS00625

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General information about the entry

Entry name [info]	RCC1_1
Accession [info]	PS00625
Entry type [info]	PATTERN
Date [info]	01-JUN-1992 CREATED; 01-NOV-1997 DATA UPDATE; 03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00544
Associated ProRule [info]	PRU00235

Name and characterization of the entry

Description [info]	Regulator of chromosome condensation (RCC1) signature 1.
Pattern [info]	G-x-N-D-x(2)-[AV]-L-G-R-x-T.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.

Total number of hits	8 in 8 different sequences
Number of true positive hits	8 in 8 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	73
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	9.88 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

8 sequences

RCC1_CANAX  (P52499    ), RCC1_DROME  (P25171    ), RCC1_HUMAN  (P18754    ),

RCC1_MESAU  (P23800    ), RCC1_MOUSE  (Q8VE37    ), RCC1_SCHPO  (P28745    ), 
RCC1_XENLA  (P25183    ), RCC1_YEAST  (P21827    )

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

73 sequences

ALS2_DROME  (Q9VNZ8    ), ALS2_HUMAN  (Q96Q42    ), ALS2_MOUSE  (Q920R0    ),

ALS2_PANTR  (Q5BIW4    ), ALS2_RAT    (P0C5Y8    ), ATS1_YEAST  (P31386    ), 
BTB1_SCHPO  (O74881    ), FBX24_HUMAN (O75426    ), FBX24_MACFA (Q4R327    ), 
FBX24_MOUSE (Q9D417    ), FMP25_YEAST (Q08023    ), GACGG_DICDI (Q54VW7    ), 
GEFC_DICDI  (Q8IS20    ), HERC1_HUMAN (Q15751    ), HERC2_DROME (Q9VR91    ), 
HERC2_HUMAN (O95714    ), HERC2_MOUSE (Q4U2R1    ), HERC3_HUMAN (Q15034    ), 
HERC4_HUMAN (Q5GLZ8    ), HERC4_MOUSE (Q6PAV2    ), HERC4_RAT   (Q5PQN1    ), 
HERC5_HUMAN (Q9UII4    ), HERC6_HUMAN (Q8IVU3    ), HERC6_MOUSE (F2Z461    ), 
HIW_DROME   (Q9NB71    ), IBTK_HUMAN  (Q9P2D0    ), IBTK_MOUSE  (Q6ZPR6    ), 
IBTK_XENLA  (Q6NRS1    ), MYCB2_DANRE (F1RD40    ), MYCB2_HUMAN (O75592    ), 
MYCB2_MOUSE (Q7TPH6    ), NEK8_DANRE  (Q90XC2    ), NEK8_HUMAN  (Q86SG6    ), 
NEK8_MOUSE  (Q91ZR4    ), NEK8_RAT    (D3ZGQ5    ), NEK9_HUMAN  (Q8TD19    ), 
NEK9_MOUSE  (Q8K1R7    ), NEK9_XENLA  (Q7ZZC8    ), POF9_SCHPO  (O74381    ), 
PRAF1_ARATH (Q947D2    ), RCBT1_HUMAN (Q8NDN9    ), RCBT1_MOUSE (Q6NXM2    ), 
RCBT2_HUMAN (O95199    ), RCBT2_MOUSE (Q99LJ7    ), RCBT2_PONAB (Q5RCZ7    ), 
RCBT2_RAT   (Q6P798    ), RCC1L_HUMAN (Q96I51    ), RCC1L_MOUSE (Q9CYF5    ), 
RCC1_CAEEL  (Q18211    ), RCC2_DANRE  (Q6NYE2    ), RCC2_HUMAN  (Q9P258    ), 
RCC2_MOUSE  (Q8BK67    ), RCC2_XENLA  (Q52KW8    ), RCCD1_HUMAN (A6NED2    ), 
RCCD1_MACFA (Q4R828    ), RCCD1_MOUSE (Q8BTU7    ), RCCDA_DICDI (Q54X24    ), 
RCCDB_DICDI (P0C7G9    ), RCCDC_DICDI (Q54Q89    ), RPGRH_CAEEL (Q5DX34    ), 
RPGR_CANLF  (Q9N1T2    ), RPGR_HUMAN  (Q92834    ), RPGR_MOUSE  (Q9R0X5    ), 
RPM1_CAEEL  (Q17551    ), SAF1_YEAST  (P38352    ), SPKUL_DICDI (Q8SSY6    ), 
SRGEF_BOVIN (Q3MHW0    ), SRGEF_HUMAN (Q9UGK8    ), SRGEF_MOUSE (Q80YD6    ), 
TIRA_DICDI  (Q54HT1    ), TITIN_MOUSE (A2ASS6    ), UVR8_ARATH  (Q9FN03    ), 
YF94_SCHPO  (O42645    )

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PDB
[Detailed view]

7 PDB

1A12; 1I2M; 3MVD; 3OF7; 5HQ2; 5T94; 5TBK