Home  |  Contact
Entry: PS00628

General information about the entry

Entry name [info] RIBOSOMAL_S19E
Accession [info] PS00628
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2001 DATA UPDATE;
10-FEB-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00546

Name and characterization of the entry

Description [info] Ribosomal protein S19e signature.
Pattern [info] 
P-x(6)-[SANG]-x(2)-[LIVMAC]-x-R-x-[ALIV]-[LV]-[QH]-x-L-[EQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_01 which contains 564'277 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.11 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 35 sequences 

RS191_ARATH (Q9SGA6    ), RS192_ARATH (Q9LF30    ), RS193_ARATH (Q9FNP8    ), 

RS19A_DROME (P39018    ), RS19A_SCHPO (P58234    ), RS19A_YEAST (P07280    ), 
RS19B_DROME (Q7KS38    ), RS19B_SCHPO (P79016    ), RS19B_YEAST (P07281    ), 
RS19E_AERPE (Q9YD22    ), RS19E_ARCFU (O28210    ), RS19E_HALMA (P19952    ), 
RS19E_METJA (P54057    ), RS19E_METTH (O27653    ), RS19E_PYRAB (Q9V0G8    ), 
RS19E_PYRHO (O59041    ), RS19G_ASCSU (P24494    ), RS19S_ASCSU (P39698    ), 
RS19_ARGIR  (Q8ITC3    ), RS19_BOVIN  (Q32PD5    ), RS19_BRABE  (Q8T5Z4    ), 
RS19_CAEEL  (O18650    ), RS19_EMENI  (P27073    ), RS19_ENTHI  (O15631    ), 
RS19_GILMI  (Q9DFR5    ), RS19_HUMAN  (P39019    ), RS19_ICTPU  (Q90YQ4    ), 
RS19_MOUSE  (Q9CZX8    ), RS19_MYAAR  (Q94613    ), RS19_MYXGL  (Q9Y0H3    ), 
RS19_ORYSJ  (P40978    ), RS19_PAGMA  (P61155    ), RS19_PIG    (Q29308    ), 
RS19_PONAB  (Q5R8M9    ), RS19_RAT    (P17074    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

RS19E_THEAC (Q9HM21    ), RS19E_THEVO (Q97CU4    ), RS19_DICDI  (Q54X51    )


				
	

	

		PDB
[Detailed view]		
		
			145 PDB
			


			2V7F; 3J6X; 3J6Y; 3J77; 3J78; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 
			
				4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V6I; 
				4V6W; 4V6X; 4V7R; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 
				5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 
				5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 
				5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 6EK0; 6EML; 6FAI; 6G18; 6G4S; 6G4W; 6G51; 
				6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6OLE; 
				6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SNT; 
				6SV4; 6SW9; 6SWC; 6SWE; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6WDR; 6WOO; 
				6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBS; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 
				6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOL; 
				6ZON; 6ZP4; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZVH; 6ZVI; 6ZVJ; 7A09; 7A1G; 
				7K5I
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission