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PROSITE entry PS00635


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General information about the entry

Entry name [info] PILI_CHAPERONE
Accession [info] PS00635
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00552

Name and characterization of the entry

Description [info] Gram-negative pili assembly chaperone signature.
Pattern [info] 
[LIVMFY]-[APN]-x-[DNS]-[KREQ]-E-[STR]-[LIVMAR]-x-[FYWTE]-x-[NCS]-[LIVM]-
x(2)-[LIVM]-P-[PAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 37 in 37 different sequences
Number of true positive hits 37 in 37 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.37 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 37 sequences 

AFAB_ECOLX  (P53516), AGGD_ECOLX  (P46004), CAF1M_YERPE (P26926), 

CLPE_ECOLX  (Q05433), CS31_ECOLX  (P15483), CSSC1_ECOLX (P53518), 
CSSC2_ECOLX (P53519), ELFD_ECO57  (Q8X5E4), ELFD_ECOLI  (P75856), 
FAEE_ECOLX  (P25401), FANE_ECOLX  (P25402), FIMB_BORPE  (P33409), 
FIMC_ECOL6  (P59590), FIMC_ECOLI  (P31697), FIMC_SALTY  (P37923), 
FOCC_ECOL6  (P62610), FOCC_ECOLX  (P62609), HIFB1_HAEIF (P35757), 
HIFB2_HAEIF (P45991), LPFB_ECO57  (Q8X5K6), LPFB_SALTY  (P43661), 
MRKB_KLEPN  (P21646), MYFB_YEREN  (P33407), NFAE_ECOLX  (P46738), 
PAPD_ECOLX  (P15319), PMFD_PROMH  (P53520), PSAB_YERPE  (P69965), 
PSAB_YERPS  (P69966), SEFB_SALEN  (P33387), SFMC_ECOLI  (P77249), 
YADV_ECOLI  (P33128), YBGP_ECOLI  (P75749), YCBF_ECOLI  (P40876), 
YEHC_ECOLI  (P33342), YFCS_ECOLI  (P77599), YQIH_ECOLI  (P77616), 
YRAI_ECOLI  (P42914)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

YHCA_ECOLI  (P28722)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			1 sequence
			


			
PRSD_ECOLX  (P42183)


				
	

	

		PDB
[Detailed view]		
		
			54 PDB
			


			1BF8; 1KIU; 1KLF; 1L4I; 1N0L; 1P5U; 1P5V; 1PDK; 1QPP; 1QPX; 1QUN; 1Z9S; 
			
				1ZE3; 2J2Z; 2J7L; 2OS7; 2UY6; 2UY7; 2W07; 2WMP; 2XG4; 2XG5; 3BWU; 3DOS; 
				3DPA; 3DPB; 3DSN; 3F65; 3F6I; 3F6L; 3GEW; 3GFU; 3JWN; 3ME0; 3RFZ; 3SQB; 
				4AY0; 4AYF; 4AZ8; 4B0M; 4DWH; 4J3O; 5GHU; 5K93; 6CD2; 6E14; 6E15; 6SWH; 
				7B0W; 7B0X; 7LHG; 7LHH; 7LHI; 7SZO
			
			

			» more