PROSITE entry PS00635
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General information about the entry
Entry name [info] | PILI_CHAPERONE |
Accession [info] | PS00635 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00552 |
Name and characterization of the entry
Description [info] | Gram-negative pili assembly chaperone signature. |
Pattern [info] |
[LIVMFY]-[APN]-x-[DNS]-[KREQ]-E-[STR]-[LIVMAR]-x-[FYWTE]-x-[NCS]-[LIVM]- x(2)-[LIVM]-P-[PAS]. |
Numerical results [info]
Total number of hits | 37 in 37 different sequences |
Number of true positive hits | 37 in 37 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 97.37 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
37 sequences
AFAB_ECOLX (P53516 ), AGGD_ECOLX (P46004 ), CAF1M_YERPE (P26926 ), CLPE_ECOLX (Q05433 ), CS31_ECOLX (P15483 ), CSSC1_ECOLX (P53518 ), CSSC2_ECOLX (P53519 ), ELFD_ECO57 (Q8X5E4 ), ELFD_ECOLI (P75856 ), FAEE_ECOLX (P25401 ), FANE_ECOLX (P25402 ), FIMB_BORPE (P33409 ), FIMC_ECOL6 (P59590 ), FIMC_ECOLI (P31697 ), FIMC_SALTY (P37923 ), FOCC_ECOL6 (P62610 ), FOCC_ECOLX (P62609 ), HIFB1_HAEIF (P35757 ), HIFB2_HAEIF (P45991 ), LPFB_ECO57 (Q8X5K6 ), LPFB_SALTY (P43661 ), MRKB_KLEPN (P21646 ), MYFB_YEREN (P33407 ), NFAE_ECOLX (P46738 ), PAPD_ECOLX (P15319 ), PMFD_PROMH (P53520 ), PSAB_YERPE (P69965 ), PSAB_YERPS (P69966 ), SEFB_SALEN (P33387 ), SFMC_ECOLI (P77249 ), YADV_ECOLI (P33128 ), YBGP_ECOLI (P75749 ), YCBF_ECOLI (P40876 ), YEHC_ECOLI (P33342 ), YFCS_ECOLI (P77599 ), YQIH_ECOLI (P77616 ), YRAI_ECOLI (P42914 )» more
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UniProtKB/Swiss-Prot False negative sequences |
1 sequence
YHCA_ECOLI (P28722 ) |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PRSD_ECOLX (P42183 ) |
PDB [Detailed view] |
54 PDB
1BF8; 1KIU; 1KLF; 1L4I; 1N0L; 1P5U; 1P5V; 1PDK; 1QPP; 1QPX; 1QUN; 1Z9S; 1ZE3; 2J2Z; 2J7L; 2OS7; 2UY6; 2UY7; 2W07; 2WMP; 2XG4; 2XG5; 3BWU; 3DOS; 3DPA; 3DPB; 3DSN; 3F65; 3F6I; 3F6L; 3GEW; 3GFU; 3JWN; 3ME0; 3RFZ; 3SQB; 4AY0; 4AYF; 4AZ8; 4B0M; 4DWH; 4J3O; 5GHU; 5K93; 6CD2; 6E14; 6E15; 6SWH; 7B0W; 7B0X; 7LHG; 7LHH; 7LHI; 7SZO » more |