PROSITE logo

PROSITE entry PS00646


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S13_1
Accession [info] PS00646
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00556

Name and characterization of the entry

Description [info] Ribosomal protein S13 signature.
Pattern [info]
[KRQSEAT]-[GS]-x-R-H-x(2)-[GSNHKLCD]-x(2)-[LIVMCT]-[RNH]-G-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 841 in 841 different sequences
Number of true positive hits 833 in 833 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 20
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.05 %
Recall (true positives / (true positives + false negatives)) 97.66 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
833 sequences

RR13_ARATH  (P42732), RR13_CYACA  (Q9TLV0), RR13_CYAM1  (P59758), 
ยป more

UniProtKB/Swiss-Prot
False negative sequences
20 sequences

RS13_BEII9  (B2IF93), RS13_CHLP8  (B3QR95), RS13_CHLPB  (B3EP37), 
ยป more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

RS13_PARDE  (P72180)

		
UniProtKB/Swiss-Prot
False positive sequences
8 sequences

FEH1_CAEEL  (Q9BKZ9), MNMC_BURA4  (B1YQ54), MNMC_BURCH  (A0K2U3), 
ยป more

PDB
[Detailed view]
1312 PDB

1FJG; 1HNW; 1HNX; 1HNZ; 1HR0; 1I94; 1I95; 1I96; 1I97; 1IBK; 1IBL; 1IBM;
ยป more