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PROSITE entry PS00660


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General information about the entry

Entry name [info] FERM_1
Accession [info] PS00660
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2002 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 1.
Pattern [info] 
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]-
x(3,5)-F-[FY]-x(2)-[DENS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 80 in 80 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 101
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 44.20 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 80 sequences 

E41L1_HUMAN (Q9H4G0), E41L1_MOUSE (Q9Z2H5), E41L1_RAT   (Q9WTP0), 

E41L2_HUMAN (O43491), E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), 
E41L3_MOUSE (Q9WV92), E41L5_BOVIN (Q58CU2), E41L5_CANLF (Q9MYU8), 
E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT   (Q5FVG2), 
E41LA_DANRE (O57457), E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), 
EPB41_BOVIN (Q9N179), EPB41_CANLF (Q6Q7P4), EPB41_HUMAN (P11171), 
EPB41_MOUSE (P48193), EPB41_XENLA (P11434), EZRI_BOVIN  (P31976), 
EZRI_HUMAN  (P15311), EZRI_MOUSE  (P26040), EZRI_RABIT  (Q8HZQ5), 
EZRI_RAT(P31977), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), 
FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT   (F1LYQ8), 
FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FRM4A_HUMAN (Q9P2Q2), 
FRM4A_MOUSE (Q8BIE6), FRMA_DICDI  (Q54EW0), FRMD3_HUMAN (A2A2Y4), 
FRMD3_MOUSE (Q8BHD4), FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), 
FRMD5_HUMAN (Q7Z6J6), FRMD5_MOUSE (Q6P5H6), FRMD7_HUMAN (Q6ZUT3), 
FRMD7_MOUSE (A2AD83), MERL_HUMAN  (P35240), MERL_MOUSE  (P46662), 
MERL_PAPAN  (P59750), MERL_RAT(Q63648), MOEH_AEDAE  (Q170J7), 
MOEH_ANOGA  (Q7PS12), MOEH_CULQU  (B0WYY2), MOEH_DROME  (P46150), 
MOEH_DROPS  (Q29GR8), MOES_BOVIN  (Q2HJ49), MOES_HUMAN  (P26038), 
MOES_LYTVA  (P52962), MOES_MOUSE  (P26041), MOES_PIG(P26042), 
MOES_RAT(O35763), PTN14_HUMAN (Q15678), PTN14_MOUSE (Q62130), 
PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), PTN21_RAT   (Q62728), 
PTN3_HUMAN  (P26045), PTN4_HUMAN  (P29074), PTN4_MOUSE  (Q9WU22), 
PTP1_CAEEL  (P28191), RADI_BOVIN  (Q32LP2), RADI_CHICK  (Q9PU45), 
RADI_HUMAN  (P35241), RADI_MOUSE  (P26043), RADI_PIG(P26044), 
TALA1_DICDI (P0CE95), TALA_DICDI  (P0CE94), TALB_DICDI  (Q54K81), 
TLN1_CHICK  (P54939), TLN1_HUMAN  (Q9Y490), TLN1_MOUSE  (P26039), 
TLN_OSCPE   (A0A3G2LGI8), UN112_CAEEL (Q18685)
» more

UniProtKB/Swiss-Prot
False negative sequences		 101 sequences 

E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), E41LB_RAT   (B2RYE5), 

EPB41_DROME (Q9V8R9), EXPA_DROME  (Q07436), FAK1_CHICK  (Q00944), 
FAK1_HUMAN  (Q05397), FAK1_MOUSE  (P34152), FAK1_RAT(O35346), 
FAK1_XENLA  (Q91738), FAK2_HUMAN  (Q14289), FAK2_MOUSE  (Q9QVP9), 
FAK2_RAT(P70600), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), 
FERM1_PONAB (Q5R8M5), FERM2_DANRE (F1Q8X5), FERM2_HUMAN (Q96AC1), 
FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), FRM4B_HUMAN (Q9Y2L6), 
FRMB_DICDI  (Q55E74), FRMC_DICDI  (P0CD60), FRMD1_HUMAN (Q8N878), 
FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), FRMD6_RAT   (Q8VII0), 
FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT   (Q5U2R3), 
FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), 
FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD3_HUMAN (Q5JV73), 
FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR  (Q622K8), 
HUM6_CAEEL  (P91443), JAK1_CYPCA  (Q09178), JAK1_DANRE  (O12990), 
JAK1_HUMAN  (P23458), JAK1_MOUSE  (P52332), JAK2_CHICK  (Q75R65), 
JAK2_HUMAN  (O60674), JAK2_MOUSE  (Q62120), JAK2_PIG(O19064), 
JAK2_PONAB  (Q5RB23), JAK2_RAT(Q62689), JAK3_HUMAN  (P52333), 
JAK3_MOUSE  (Q62137), JAK3_RAT(Q63272), JAK_DROME   (Q24592), 
KIN32_CAEEL (Q95YD4), KN14E_ARATH (Q9FHN8), KN14I_ORYSJ (Q7XPJ0), 
KRIT1_BOVIN (Q6TNJ1), KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), 
KRIT1_MOUSE (Q6S5J6), MERH_DROME  (Q24564), MYLIA_DANRE (Q6TEM9), 
MYLIB_DANRE (Q05AK5), MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), 
MYLIP_RAT   (D3ZDI6), MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), 
MYO10_MOUSE (F8VQB6), MYO10_RAT   (D3ZJP6), MYO15_HUMAN (Q9UKN7), 
MYO15_MOUSE (Q9QZZ4), MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), 
MYO7A_DROPS (Q29P71), MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), 
MYO7B_HUMAN (Q6PIF6), MYO7B_MOUSE (Q99MZ6), MYOG_DICDI  (Q86AC8), 
MYOI_DICDI  (Q9U1M8), PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), 
PKHH1_MOUSE (Q80TI1), PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), 
PKHH3_HUMAN (Q7Z736), PKHH3_MOUSE (Q8VCE9), PKHH3_RAT   (Q3B7L1), 
PTN13_HUMAN (Q12923), PTN13_MOUSE (Q64512), TLN2_HUMAN  (Q9Y4G6), 
TLN2_MOUSE  (Q71LX4), TYK2_HUMAN  (P29597), TYK2_MOUSE  (Q9R117), 
UN112_DROME (Q9VZI3), URP2_BOVIN  (Q32LP0), URP2_HUMAN  (Q86UX7), 
URP2_MOUSE  (Q8K1B8), Y34F_DROME  (Q9W5D0)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

EPB41_CHICK (P12264), EZRI_MESAU  (P86232)


				
	

	

		PDB
[Detailed view]		
		
			99 PDB
			


			1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 
			
				2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; 3U8Z; 
				3WA0; 3X23; 4P7I; 4RM8; 4RM9; 4RMA; 4YL8; 4ZRI; 4ZRJ; 4ZRK; 5RYM; 5RYN; 
				5RYO; 5RYP; 5RYQ; 5RYR; 5RYS; 5RYT; 5RYU; 5RYV; 5RYW; 5RYX; 5RYY; 5RYZ; 
				5RZ0; 5RZ1; 5RZ2; 5RZ3; 5RZ4; 5RZ5; 5RZ6; 5RZ7; 5RZ8; 5RZ9; 5RZA; 5RZB; 
				5RZC; 5RZD; 5RZE; 5RZF; 5RZG; 5RZH; 5RZI; 5RZJ; 5RZK; 5RZL; 5RZM; 5RZN; 
				5RZO; 5RZP; 5RZQ; 5RZR; 5RZS; 5RZT; 5RZU; 5RZV; 5RZW; 5RZX; 5RZY; 5RZZ; 
				5S00; 6CDS; 6D2K; 6IBE; 6MFS; 6R9T; 6T36; 6TXQ; 6TXS; 6VGU; 7LWH; 8CIR; 
				8CIS; 8CIT; 8CIU
			
			

			» more