PROSITE entry PS00660
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General information about the entry
| Entry name [info] | FERM_1 |
| Accession [info] | PS00660 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1992 CREATED;
01-DEC-2002 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00566 |
Name and characterization of the entry
| Description [info] | FERM domain signature 1. |
| Pattern [info] |
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]- x(3,5)-F-[FY]-x(2)-[DENS]. |
Numerical results [info]
| Total number of hits | 81 in 81 different sequences |
| Number of true positive hits | 81 in 81 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 102 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 44.26 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
81 sequences
E41L1_HUMAN (Q9H4G0), E41L1_MOUSE (Q9Z2H5), E41L1_RAT (Q9WTP0), E41L2_HUMAN (O43491), E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), E41L3_MOUSE (Q9WV92), E41L5_BOVIN (Q58CU2), E41L5_CANLF (Q9MYU8), E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT (Q5FVG2), E41LA_DANRE (O57457), E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), EPB41_BOVIN (Q9N179), EPB41_CANLF (Q6Q7P4), EPB41_HUMAN (P11171), EPB41_MOUSE (P48193), EPB41_XENLA (P11434), EZRI_BOVIN (P31976), EZRI_HUMAN (P15311), EZRI_MOUSE (P26040), EZRI_RABIT (Q8HZQ5), EZRI_RAT(P31977), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT (F1LYQ8), FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FRM4A_HUMAN (Q9P2Q2), FRM4A_MOUSE (Q8BIE6), FRMA_DICDI (Q54EW0), FRMD3_HUMAN (A2A2Y4), FRMD3_MOUSE (Q8BHD4), FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), FRMD5_HUMAN (Q7Z6J6), FRMD5_MOUSE (Q6P5H6), FRMD7_HUMAN (Q6ZUT3), FRMD7_MOUSE (A2AD83), MERL_HUMAN (P35240), MERL_MOUSE (P46662), MERL_PAPAN (P59750), MERL_RAT(Q63648), MOEH_AEDAE (Q170J7), MOEH_ANOGA (Q7PS12), MOEH_CULQU (B0WYY2), MOEH_DROME (P46150), MOEH_DROPS (Q29GR8), MOESA_DANRE (Q66I42), MOES_BOVIN (Q2HJ49), MOES_HUMAN (P26038), MOES_LYTVA (P52962), MOES_MOUSE (P26041), MOES_PIG(P26042), MOES_RAT(O35763), PTN14_HUMAN (Q15678), PTN14_MOUSE (Q62130), PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), PTN21_RAT (Q62728), PTN3_HUMAN (P26045), PTN4_HUMAN (P29074), PTN4_MOUSE (Q9WU22), PTP1_CAEEL (P28191), RADI_BOVIN (Q32LP2), RADI_CHICK (Q9PU45), RADI_HUMAN (P35241), RADI_MOUSE (P26043), RADI_PIG(P26044), TALA1_DICDI (P0CE95), TALA_DICDI (P0CE94), TALB_DICDI (Q54K81), TLN1_CHICK (P54939), TLN1_HUMAN (Q9Y490), TLN1_MOUSE (P26039), TLN_OSCPE (A0A3G2LGI8), UN112_CAEEL (Q18685)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
102 sequences
E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), E41LB_RAT (B2RYE5), EPB41_DROME (Q9V8R9), EXPA_DROME (Q07436), FAK1_CHICK (Q00944), FAK1_HUMAN (Q05397), FAK1_MOUSE (P34152), FAK1_RAT(O35346), FAK1_XENLA (Q91738), FAK2_HUMAN (Q14289), FAK2_MOUSE (Q9QVP9), FAK2_RAT(P70600), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), FERM1_PONAB (Q5R8M5), FERM2_DANRE (F1Q8X5), FERM2_HUMAN (Q96AC1), FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), FRM4B_HUMAN (Q9Y2L6), FRMB_DICDI (Q55E74), FRMC_DICDI (P0CD60), FRMD1_HUMAN (Q8N878), FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), FRMD6_RAT (Q8VII0), FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT (Q5U2R3), FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD2_MOUSE (A0A140LI67), FRPD3_HUMAN (Q5JV73), FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR (Q622K8), HUM6_CAEEL (P91443), JAK1_CYPCA (Q09178), JAK1_DANRE (O12990), JAK1_HUMAN (P23458), JAK1_MOUSE (P52332), JAK2_CHICK (Q75R65), JAK2_HUMAN (O60674), JAK2_MOUSE (Q62120), JAK2_PIG(O19064), JAK2_PONAB (Q5RB23), JAK2_RAT(Q62689), JAK3_HUMAN (P52333), JAK3_MOUSE (Q62137), JAK3_RAT(Q63272), JAK_DROME (Q24592), KIN32_CAEEL (Q95YD4), KN14E_ARATH (Q9FHN8), KN14I_ORYSJ (Q7XPJ0), KRIT1_BOVIN (Q6TNJ1), KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), KRIT1_MOUSE (Q6S5J6), MERH_DROME (Q24564), MYLIA_DANRE (Q6TEM9), MYLIB_DANRE (Q05AK5), MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), MYLIP_RAT (D3ZDI6), MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), MYO10_MOUSE (F8VQB6), MYO10_RAT (D3ZJP6), MYO15_HUMAN (Q9UKN7), MYO15_MOUSE (Q9QZZ4), MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), MYO7A_DROPS (Q29P71), MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), MYO7B_HUMAN (Q6PIF6), MYO7B_MOUSE (Q99MZ6), MYOG_DICDI (Q86AC8), MYOI_DICDI (Q9U1M8), PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), PKHH1_MOUSE (Q80TI1), PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), PKHH3_HUMAN (Q7Z736), PKHH3_MOUSE (Q8VCE9), PKHH3_RAT (Q3B7L1), PTN13_HUMAN (Q12923), PTN13_MOUSE (Q64512), TLN2_HUMAN (Q9Y4G6), TLN2_MOUSE (Q71LX4), TYK2_HUMAN (P29597), TYK2_MOUSE (Q9R117), UN112_DROME (Q9VZI3), URP2_BOVIN (Q32LP0), URP2_HUMAN (Q86UX7), URP2_MOUSE (Q8K1B8), Y34F_DROME (Q9W5D0)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
EPB41_CHICK (P12264), EZRI_MESAU (P86232) |
| PDB [Detailed view] |
105 PDB
1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; 3U8Z; 3WA0; 3X23; 4P7I; 4RM8; 4RM9; 4RMA; 4YL8; 4ZRI; 4ZRJ; 4ZRK; 5RYM; 5RYN; 5RYO; 5RYP; 5RYQ; 5RYR; 5RYS; 5RYT; 5RYU; 5RYV; 5RYW; 5RYX; 5RYY; 5RYZ; 5RZ0; 5RZ1; 5RZ2; 5RZ3; 5RZ4; 5RZ5; 5RZ6; 5RZ7; 5RZ8; 5RZ9; 5RZA; 5RZB; 5RZC; 5RZD; 5RZE; 5RZF; 5RZG; 5RZH; 5RZI; 5RZJ; 5RZK; 5RZL; 5RZM; 5RZN; 5RZO; 5RZP; 5RZQ; 5RZR; 5RZS; 5RZT; 5RZU; 5RZV; 5RZW; 5RZX; 5RZY; 5RZZ; 5S00; 6CDS; 6D2K; 6IBE; 6MFS; 6R9T; 6T36; 6TXQ; 6TXS; 6VGU; 7LWH; 8CIR; 8CIS; 8CIT; 8CIU; 8FSE; 8FTB; 8GVL; 8GXE; 8T0D; 8Y8Y » more |