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PROSITE entry PS00661


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General information about the entry

Entry name [info] FERM_2
Accession [info] PS00661
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 2.
Pattern [info] 
[HYW]-x(9)-[DENQSTV]-[SA]-x(3)-[FYC]-[LIVM]-x(2,3)-[ACVWD]-x(2)-[LM]-
x(2)-[FY]-[GM]-x-[DENQSTH]-[LIVMFYS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 83 in 83 different sequences
Number of true positive hits 83 in 83 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 100
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 45.36 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 83 sequences 

E41L1_HUMAN (Q9H4G0), E41L1_MOUSE (Q9Z2H5), E41L1_RAT   (Q9WTP0), 

E41L2_HUMAN (O43491), E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), 
E41L3_MOUSE (Q9WV92), E41L5_BOVIN (Q58CU2), E41L5_CANLF (Q9MYU8), 
E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT   (Q5FVG2), 
E41LA_DANRE (O57457), E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), 
E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), E41LB_RAT   (B2RYE5), 
EPB41_BOVIN (Q9N179), EPB41_CANLF (Q6Q7P4), EPB41_DROME (Q9V8R9), 
EPB41_HUMAN (P11171), EPB41_MOUSE (P48193), EPB41_XENLA (P11434), 
EZRI_BOVIN  (P31976), EZRI_HUMAN  (P15311), EZRI_MOUSE  (P26040), 
EZRI_RABIT  (Q8HZQ5), EZRI_RAT(P31977), FAK1_CHICK  (Q00944), 
FAK1_HUMAN  (Q05397), FAK1_MOUSE  (P34152), FAK1_RAT(O35346), 
FAK1_XENLA  (Q91738), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), 
FERM1_PONAB (Q5R8M5), FRM4A_HUMAN (Q9P2Q2), FRM4A_MOUSE (Q8BIE6), 
FRM4B_HUMAN (Q9Y2L6), FRM4B_MOUSE (Q920B0), MERL_HUMAN  (P35240), 
MERL_MOUSE  (P46662), MERL_PAPAN  (P59750), MERL_RAT(Q63648), 
MOEH_AEDAE  (Q170J7), MOEH_ANOGA  (Q7PS12), MOEH_CULQU  (B0WYY2), 
MOEH_DROME  (P46150), MOEH_DROPS  (Q29GR8), MOES_BOVIN  (Q2HJ49), 
MOES_HUMAN  (P26038), MOES_LYTVA  (P52962), MOES_MOUSE  (P26041), 
MOES_PIG(P26042), MOES_RAT(O35763), PTN14_HUMAN (Q15678), 
PTN14_MOUSE (Q62130), PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), 
PTN21_RAT   (Q62728), PTN3_HUMAN  (P26045), PTN3_MOUSE  (A2ALK8), 
PTN4_HUMAN  (P29074), PTN4_MOUSE  (Q9WU22), PTP1_CAEEL  (P28191), 
RADI_BOVIN  (Q32LP2), RADI_CHICK  (Q9PU45), RADI_HUMAN  (P35241), 
RADI_MOUSE  (P26043), RADI_PIG(P26044), TALA1_DICDI (P0CE95), 
TALA_DICDI  (P0CE94), TLN1_CHICK  (P54939), TLN1_HUMAN  (Q9Y490), 
TLN1_MOUSE  (P26039), TLN2_HUMAN  (Q9Y4G6), TLN2_MOUSE  (Q71LX4), 
TLN_OSCPE   (A0A3G2LGI8), UN112_DROME (Q9VZI3), URP2_BOVIN  (Q32LP0), 
URP2_HUMAN  (Q86UX7), URP2_MOUSE  (Q8K1B8)
» more

UniProtKB/Swiss-Prot
False negative sequences		 100 sequences 

EXPA_DROME  (Q07436), FAK2_HUMAN  (Q14289), FAK2_MOUSE  (Q9QVP9), 

FAK2_RAT(P70600), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), 
FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT   (F1LYQ8), 
FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FERM2_DANRE (F1Q8X5), 
FERM2_HUMAN (Q96AC1), FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), 
FRMA_DICDI  (Q54EW0), FRMB_DICDI  (Q55E74), FRMC_DICDI  (P0CD60), 
FRMD1_HUMAN (Q8N878), FRMD3_HUMAN (A2A2Y4), FRMD3_MOUSE (Q8BHD4), 
FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), FRMD5_HUMAN (Q7Z6J6), 
FRMD5_MOUSE (Q6P5H6), FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), 
FRMD6_RAT   (Q8VII0), FRMD7_HUMAN (Q6ZUT3), FRMD7_MOUSE (A2AD83), 
FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT   (Q5U2R3), 
FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), 
FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD3_HUMAN (Q5JV73), 
FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR  (Q622K8), 
HUM6_CAEEL  (P91443), JAK1_CYPCA  (Q09178), JAK1_DANRE  (O12990), 
JAK1_HUMAN  (P23458), JAK1_MOUSE  (P52332), JAK2_CHICK  (Q75R65), 
JAK2_HUMAN  (O60674), JAK2_MOUSE  (Q62120), JAK2_PIG(O19064), 
JAK2_PONAB  (Q5RB23), JAK2_RAT(Q62689), JAK3_HUMAN  (P52333), 
JAK3_MOUSE  (Q62137), JAK3_RAT(Q63272), JAK_DROME   (Q24592), 
KIN32_CAEEL (Q95YD4), KN14E_ARATH (Q9FHN8), KN14I_ORYSJ (Q7XPJ0), 
KRIT1_BOVIN (Q6TNJ1), KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), 
KRIT1_MOUSE (Q6S5J6), MERH_DROME  (Q24564), MYLIA_DANRE (Q6TEM9), 
MYLIB_DANRE (Q05AK5), MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), 
MYLIP_RAT   (D3ZDI6), MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), 
MYO10_MOUSE (F8VQB6), MYO10_RAT   (D3ZJP6), MYO15_HUMAN (Q9UKN7), 
MYO15_MOUSE (Q9QZZ4), MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), 
MYO7A_DROPS (Q29P71), MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), 
MYO7B_HUMAN (Q6PIF6), MYO7B_MOUSE (Q99MZ6), MYOG_DICDI  (Q86AC8), 
MYOI_DICDI  (Q9U1M8), PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), 
PKHH1_MOUSE (Q80TI1), PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), 
PKHH3_HUMAN (Q7Z736), PKHH3_MOUSE (Q8VCE9), PKHH3_RAT   (Q3B7L1), 
PTN13_HUMAN (Q12923), PTN13_MOUSE (Q64512), TALB_DICDI  (Q54K81), 
TYK2_HUMAN  (P29597), TYK2_MOUSE  (Q9R117), UN112_CAEEL (Q18685), 
Y34F_DROME  (Q9W5D0)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

EPB41_CHICK (P12264), EZRI_MESAU  (P86232)


				
	

	

		PDB
[Detailed view]		
		
			155 PDB
			


			1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1MIX; 1MIZ; 1MK7; 1MK9; 
			
				1MP8; 1NI2; 1SGH; 1Y19; 2D10; 2D11; 2D2Q; 2EMS; 2EMT; 2ETM; 2HE7; 2IJM; 
				2J0J; 2J0K; 2J0L; 2J0M; 2JKK; 2JKM; 2JKO; 2JKQ; 2YVC; 2ZPY; 3BIN; 3BZ3; 
				3G9W; 3IVF; 3PXK; 3QIJ; 3U8Z; 3WA0; 3X23; 4BRX; 4C7T; 4D4R; 4D4S; 4D4V; 
				4D4Y; 4D55; 4D58; 4D5H; 4D5K; 4EBV; 4EBW; 4F7G; 4GU6; 4GU9; 4I4E; 4I4F; 
				4K8A; 4K9Y; 4KAB; 4KAO; 4P7I; 4Q9S; 4RM8; 4RM9; 4RMA; 4YL8; 4ZRI; 4ZRJ; 
				4ZRK; 5RYM; 5RYN; 5RYO; 5RYP; 5RYQ; 5RYR; 5RYS; 5RYT; 5RYU; 5RYV; 5RYW; 
				5RYX; 5RYY; 5RYZ; 5RZ0; 5RZ1; 5RZ2; 5RZ3; 5RZ4; 5RZ5; 5RZ6; 5RZ7; 5RZ8; 
				5RZ9; 5RZA; 5RZB; 5RZC; 5RZD; 5RZE; 5RZF; 5RZG; 5RZH; 5RZI; 5RZJ; 5RZK; 
				5RZL; 5RZM; 5RZN; 5RZO; 5RZP; 5RZQ; 5RZR; 5RZS; 5RZT; 5RZU; 5RZV; 5RZW; 
				5RZX; 5RZY; 5RZZ; 5S00; 6CDS; 6GCR; 6GCW; 6GCX; 6I8Z; 6IBE; 6MFS; 6R9T; 
				6T36; 6TXQ; 6TXS; 6TY3; 6TY4; 6U4K; 6V97; 6V9G; 6VGU; 6YOJ; 6YQ1; 6YR9; 
				6YT6; 6YVS; 6YVY; 6YXV; 7C3M; 7LWH; 7PI4; 8CIR; 8CIS; 8CIT; 8CIU
			
			

			» more