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Entry: PS00664

General information about the entry

Entry name [info] VINCULIN_2
Accession [info] PS00664
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-JUN-1992 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00568

Name and characterization of the entry

Description [info] Vinculin repeated domain signature.
Pattern [info] 
[LIVM]-x-[QA]-A-x(2)-W-[IL]-x-[DN]-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 21 in 10 different sequences
Number of true positive hits 18 in 7 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 85.71 %
Recall (true positives / (true positives + false negatives)) 90.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 7 sequences 

VINC_CAEEL  (P19826    ), VINC_CHICK  (P12003    ), VINC_DROME  (O46037    ), 

VINC_HUMAN  (P18206    ), VINC_MOUSE  (Q64727    ), VINC_PIG    (P26234    ), 
VINC_RAT    (P85972    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

VINC_BRUMA  (Q17162    ), VINC_DICDI  (Q54MH2    )


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			1 sequence
			


			
VINC_XENLA  (Q04615    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			3 sequences
			


			
SEC31_CANAL (Q5AAU3    ), SEC31_LODEL (A5DTX3    ), SPPA_SYNY3  (P73689    )


				
	

	

		PDB
[Detailed view]		
		
			4 PDB
			


			1ST6; 1TR2; 6FUY; 6NR7
				
	





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