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PROSITE entry PS00669


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General information about the entry

Entry name [info] GAS_VESICLE_A_2
Accession [info] PS00669
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE;
24-JAN-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00207

Name and characterization of the entry

Description [info] Gas vesicles protein GVPa signature 2.
Pattern [info]
R-[LIVA](3)-A-[GS]-[LIVMFY]-x-[TK]-x(3)-[YFI]-[AG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_01 which contains 570'830 sequence entries.


Total number of hits 40 in 40 different sequences
Number of true positive hits 40 in 40 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 7
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.11 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
40 sequences

GVPA1_HALSA (P08958), GVPA1_PRIMG (O68680), GVPA1_STRCO (Q9ZC13), 
GVPA2_HALSA (P08959), GVPA2_PRIMG (O68677), GVPA2_STRCO (Q9RJB4), 
GVPA_ANCAQ  (Q9RH31), GVPA_BRASO  (A4YMQ7), GVPA_CERS1  (A3PPT5), 
GVPA_CERS4  (Q3IWB1), GVPA_CERSK  (B9KU72), GVPA_DOLFA  (P10397), 
GVPA_GEOUR  (A5G5E4), GVPA_HALMT  (P23761), GVPA_HALVU  (O33397), 
GVPA_HALWD  (Q18JA1), GVPA_KORVE  (Q1INZ5), GVPA_MICAN  (B0JPK6), 
GVPA_MICBC  (P08412), GVPA_MICDP  (P07060), GVPA_MYCSJ  (A3PZ32), 
GVPA_MYCSK  (A1UFH1), GVPA_MYCSS  (Q1B9J2), GVPA_NOSP7  (B2J663), 
GVPA_NOSS1  (Q8XFU1), GVPA_PLAAG  (P0A3G0), GVPA_PLARU  (P0A3G1), 
GVPA_PSEGP  (P22453), GVPA_STRX0  (A0A1Q5LR04), GVPA_SYNJA  (Q2JW39), 
GVPA_SYNJB  (Q2JKK1), GVPA_THIPN  (P80998), GVPJ1_HALSA (P24374), 
GVPJ2_HALSA (P33956), GVPJ_HALMT  (Q02235), GVPJ_PRIMG  (O68669), 
GVPJ_PSEGP  (Q9AKS3), GVPM1_HALSA (P24377), GVPM2_HALSA (P33957), 
GVPM_HALMT  (Q02238)
» more

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

GVPA_SPICC  (P80997), GVPJ1_STRCO (Q9ZC08), GVPJ2_STRCO (Q9RJA9), 
GVPJ_DOLFA  (P55147), GVPJ_NOSS1  (Q8YUT1), GVPS_PRIMG  (O68671), 
GVPS_STRX0  (A0A1Q5LQW7)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

GVPA_DACSA  (Q9R5H8)

		
PDB
[Detailed view]
1 PDB

8GBS