PROSITE logo

PROSITE entry PS00679


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] BETA_AMYLASE_2
Accession [info] PS00679
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-JUN-1992 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00414
Associated ProRule [info] PRU10050

Name and characterization of the entry

Description [info] Beta-amylase active site 2.
Pattern [info] 
G-x-[SA]-G-E-[LIVM]-R-Y-P-S-Y.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 19 in 19 different sequences
Number of true positive hits 19 in 19 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 76.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 19 sequences 

AMYB_BACCE  (P36924), AMYB_CYTFI  (P96513), AMYB_HORVS  (P82993), 

AMYB_HORVU  (P16098), AMYB_IPOBA  (P10537), AMYB_MAIZE  (P55005), 
AMYB_MEDSA  (O22585), AMYB_NIACI  (P06547), AMYB_PAEPO  (P21543), 
AMYB_SOYBN  (P10538), AMYB_THETU  (P19584), AMYB_TRIRP  (O65015), 
AMYB_VIGUN  (O64407), AMYB_WHEAT  (P93594), BAM1_ARATH  (Q9LIR6), 
BAM5_ARATH  (P25853), BAM6_ARATH  (Q8L762), BAMY1_ORYSJ (Q9AV88), 
BAMY2_ORYSJ (Q10RZ1)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

BAM2_ARATH  (O65258), BAM3_ARATH  (O23553), BAM4_ARATH  (Q9FM68), 

BAM7_ARATH  (O80831), BAM8_ARATH  (Q9FH80), BAM9_ARATH  (Q8VYW2)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

AMYB_SECCE  (P30271)


				
	

	

		PDB
[Detailed view]		
		
			43 PDB
			


			1B1Y; 1B90; 1B9Z; 1BFN; 1BTC; 1BYA; 1BYB; 1BYC; 1BYD; 1FA2; 1J0Y; 1J0Z; 
			
				1J10; 1J11; 1J12; 1J18; 1Q6C; 1Q6D; 1Q6E; 1Q6F; 1Q6G; 1UKO; 1UKP; 1V3I; 
				1VEM; 1VEN; 1VEO; 1VEP; 1WDP; 1WDQ; 1WDR; 1WDS; 2XFF; 2XFR; 2XFY; 2XG9; 
				2XGB; 2XGI; 3VOC; 5BCA; 5WQS; 5WQU; 6GER
			
			

			» more