PROSITE logo

PROSITE entry PS00679


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00679
Entry name [info] BETA_AMYLASE_2
Accession [info] PS00679
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-JUN-1992 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00414
Associated ProRule [info] PRU10050

Name and characterization of the entry

Description [info] Beta-amylase active site 2.
Pattern [info] 
G-x-[SA]-G-E-[LIVM]-R-Y-P-S-Y.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 19 in 19 different sequences
Number of true positive hits 19 in 19 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 76.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 19 sequences 

AMYB_BACCE  (P36924), AMYB_CYTFI  (P96513), AMYB_HORVS  (P82993), 

AMYB_HORVU  (P16098), AMYB_IPOBA  (P10537), AMYB_MAIZE  (P55005), 
AMYB_MEDSA  (O22585), AMYB_NIACI  (P06547), AMYB_PAEPO  (P21543), 
AMYB_SOYBN  (P10538), AMYB_THETU  (P19584), AMYB_TRIRP  (O65015), 
AMYB_VIGUN  (O64407), AMYB_WHEAT  (P93594), BAM1_ARATH  (Q9LIR6), 
BAM5_ARATH  (P25853), BAM6_ARATH  (Q8L762), BAMY1_ORYSJ (Q9AV88), 
BAMY2_ORYSJ (Q10RZ1)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

BAM2_ARATH  (O65258), BAM3_ARATH  (O23553), BAM4_ARATH  (Q9FM68), 

BAM7_ARATH  (O80831), BAM8_ARATH  (Q9FH80), BAM9_ARATH  (Q8VYW2)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

AMYB_SECCE  (P30271)


				
	

	

		PDB
[Detailed view]		
		
			45 PDB
			


			1B1Y; 1B90; 1B9Z; 1BFN; 1BTC; 1BYA; 1BYB; 1BYC; 1BYD; 1FA2; 1J0Y; 1J0Z; 
			
				1J10; 1J11; 1J12; 1J18; 1Q6C; 1Q6D; 1Q6E; 1Q6F; 1Q6G; 1UKO; 1UKP; 1V3I; 
				1VEM; 1VEN; 1VEO; 1VEP; 1WDP; 1WDQ; 1WDR; 1WDS; 2XFF; 2XFR; 2XFY; 2XG9; 
				2XGB; 2XGI; 3VOC; 5BCA; 5WQS; 5WQU; 6GER; 8J5D; 8ZRZ
			
			

			» more