PROSITE entry PS00679
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General information about the entry
Entry name [info] | BETA_AMYLASE_2 |
Accession [info] | PS00679 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1992 CREATED;
01-JUN-1992 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00414 |
Associated ProRule [info] | PRU10050 |
Name and characterization of the entry
Description [info] | Beta-amylase active site 2. |
Pattern [info] |
G-x-[SA]-G-E-[LIVM]-R-Y-P-S-Y. |
Numerical results [info]
Total number of hits | 19 in 19 different sequences |
Number of true positive hits | 19 in 19 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 6 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 76.00 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site at position 5 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
19 sequences
AMYB_BACCE (P36924), AMYB_CYTFI (P96513), AMYB_HORVS (P82993), AMYB_HORVU (P16098), AMYB_IPOBA (P10537), AMYB_MAIZE (P55005), AMYB_MEDSA (O22585), AMYB_NIACI (P06547), AMYB_PAEPO (P21543), AMYB_SOYBN (P10538), AMYB_THETU (P19584), AMYB_TRIRP (O65015), AMYB_VIGUN (O64407), AMYB_WHEAT (P93594), BAM1_ARATH (Q9LIR6), BAM5_ARATH (P25853), BAM6_ARATH (Q8L762), BAMY1_ORYSJ (Q9AV88), BAMY2_ORYSJ (Q10RZ1)» more
|
UniProtKB/Swiss-Prot False negative sequences |
6 sequences
BAM2_ARATH (O65258), BAM3_ARATH (O23553), BAM4_ARATH (Q9FM68), BAM7_ARATH (O80831), BAM8_ARATH (Q9FH80), BAM9_ARATH (Q8VYW2)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
AMYB_SECCE (P30271) |
PDB [Detailed view] |
43 PDB
1B1Y; 1B90; 1B9Z; 1BFN; 1BTC; 1BYA; 1BYB; 1BYC; 1BYD; 1FA2; 1J0Y; 1J0Z; 1J10; 1J11; 1J12; 1J18; 1Q6C; 1Q6D; 1Q6E; 1Q6F; 1Q6G; 1UKO; 1UKP; 1V3I; 1VEM; 1VEN; 1VEO; 1VEP; 1WDP; 1WDQ; 1WDR; 1WDS; 2XFF; 2XFR; 2XFY; 2XG9; 2XGB; 2XGI; 3VOC; 5BCA; 5WQS; 5WQU; 6GER » more |