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Entry: PS00683

General information about the entry

Entry name [info] RHODANESE_2
Accession [info] PS00683
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-JUL-1999 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00322

Name and characterization of the entry

Description [info] Rhodanese C-terminal signature.
Pattern [info] 
[AV]-x(2)-[FY]-[DEAP]-G-[GSA]-[WF]-x-E-[FYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 39 in 39 different sequences
Number of true positive hits 36 in 36 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 27
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 92.31 %
Recall (true positives / (true positives + false negatives)) 57.14 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 36 sequences 

STR1_ARATH  (O64530    ), STR2_ARATH  (Q24JL3    ), THT2_MYCBO  (Q7TWT6    ), 

THT2_MYCLE  (P46700    ), THT2_MYCTO  (P9WHF6    ), THT2_MYCTU  (P9WHF7    ), 
THT3_MYCTO  (P9WHF4    ), THT3_MYCTU  (P9WHF5    ), THTM_ECO57  (P58388    ), 
THTM_ECOLI  (P31142    ), THTM_HUMAN  (P25325    ), THTM_MOUSE  (Q99J99    ), 
THTM_RAT    (P97532    ), THTR1_MYCBO (P59989    ), THTR_AZOVI  (P52197    ), 
THTR_BOVIN  (P00586    ), THTR_CHICK  (P25324    ), THTR_CORGL  (P71121    ), 
THTR_CRIGR  (P46635    ), THTR_DEIRA  (Q9RXT9    ), THTR_HALVD  (D4GYM0    ), 
THTR_HUMAN  (Q16762    ), THTR_METTH  (O26719    ), THTR_MOUSE  (P52196    ), 
THTR_MYCLE  (Q50036    ), THTR_MYCS2  (A0R4C9    ), THTR_MYCTO  (P9WHF8    ), 
THTR_MYCTU  (P9WHF9    ), THTR_PSEAE  (Q9HUK9    ), THTR_RAT    (P24329    ), 
THTR_SACER  (P16385    ), THTR_SYNE7  (P27477    ), THTR_YEAST  (Q08686    ), 
TSTD3_MOUSE (Q9D0B5    ), TTUD_THET2  (Q72JV2    ), YNJE_ECOLI  (P78067    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 27 sequences 

ACR21_ORYSJ (Q336V5    ), ACR22_ORYSJ (Q10SX6    ), CAS_ARATH   (Q9FN48    ), 

CDC25_ARATH (Q8GY31    ), HARC1_ARATH (Q8RUD6    ), MOCS3_ARATH (Q9ZNW0    ), 
RHODA_ALLVD (D3RPB9    ), STR10_ARATH (Q9SR92    ), STR11_ARATH (Q0WWT7    ), 
STR12_ARATH (Q93WI0    ), STR14_ARATH (Q94A65    ), STR15_ARATH (Q38853    ), 
STR16_ARATH (Q39129    ), STR17_ARATH (F4IPI4    ), STR18_ARATH (Q9FKW8    ), 
STR4A_ARATH (Q56XR7    ), STR4_ARATH  (Q9M158    ), STR6_ARATH  (Q94AC1    ), 
STR7_ARATH  (Q1JPN0    ), STR8_ARATH  (F4I933    ), STR9_ARATH  (O48529    ), 
THT1_CAEEL  (P91247    ), THT2_CAEEL  (O17730    ), THTM_PSEAE  (Q9I452    ), 
THTM_SCHPO  (Q9USJ1    ), THTR2_MYCBO (Q7TX80    ), YTWF_BACSU  (O32072    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

CYDK_THEKO  (Q5JEK6    ), FGD_MYCTO   (P9WNE0    ), FGD_MYCTU   (P9WNE1    )


				
	

	

		PDB
[Detailed view]		
		
			26 PDB
			


			1BOH; 1BOI; 1DP2; 1E0C; 1H4K; 1H4M; 1ORB; 1RHD; 1RHS; 1URH; 2ORA; 2WLR; 
			
				2WLX; 3AAX; 3AAY; 3HWI; 3HZU; 3IPO; 3IPP; 3OLH; 3UTN; 4JGT; 5WQJ; 5WQK; 
				8AGF; 8BGQ
			
			

			» more

				
	





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