PROSITE entry PS00686

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General information about the entry

Entry name [info]	NFYA_HAP2_1
Accession [info]	PS00686
Entry type [info]	PATTERN
Date [info]	01-JUN-1992 CREATED; 01-OCT-2005 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00578

Name and characterization of the entry

Description [info]	NF-YA/HAP2 subunit signature.
Pattern [info]	[FY]-V-N-[AS]-K-Q-[FY]-x(2)-I-[ILM]-[KR]-R-R-x(2)-R-A-K-[LA]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	16 in 16 different sequences
Number of true positive hits	16 in 16 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	4
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	80.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

16 sequences

HAP2_KLULA  (P53768), HAP2_SCHPO  (P24488), HAP2_YEAST  (P06774),

NFYA1_ARATH (Q9LXV5), NFYA3_ARATH (Q93ZH2), NFYA4_ARATH (Q8VY64), 
NFYA5_ARATH (Q9SYH4), NFYA6_ARATH (Q9LVJ7), NFYA8_ARATH (Q9LNP6), 
NFYA9_ARATH (Q945M9), NFYAA_ARATH (Q8LFU0), NFYA_BOVIN  (Q5E9S2), 
NFYA_DICDI  (Q54S29), NFYA_HUMAN  (P23511), NFYA_MOUSE  (P23708), 
NFYA_RAT(P18576)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

4 sequences

NFYA1_CAEEL (G5EEG1), NFYA2_ARATH (Q9M9X4), NFYA2_CAEEL (Q5ZEP9),

NFYA7_ARATH (Q84JP1)

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PDB
[Detailed view]

2 PDB

4AWL; 6R2V