PROSITE logo

PROSITE entry PS00689


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] GLYCO_HORMONE_BETA_2
Accession [info] PS00689
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00234

Name and characterization of the entry

Description [info] Glycoprotein hormones beta chain signature 2.
Pattern [info]
[PA]-V-A-x(2)-C-x-C-x(2)-C-x(4)-[STDAI]-[DEY]-C-x(6,8)-[PGSTAVMI]-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 108 in 108 different sequences
Number of true positive hits 108 in 108 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.30 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 5
Site [info] disulfide at position 7
Site [info] disulfide at position 9
Site [info] disulfide at position 13
Site [info] disulfide at position 17
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
108 sequences

CGB1_HUMAN  (A6NKQ9), CGB2_HUMAN  (Q6NT52), CGB3_HUMAN  (P0DN86), 
CGB7_HUMAN  (P0DN87), CGHB_AOTNA  (Q3HRV3), CGHB_CALJA  (P51500), 
CGHB_PAPAN  (P07434), FSHB_AILME  (Q8WN19), FSHB_AOTNA  (Q3HRV4), 
FSHB_AQUCT  (Q9PS36), FSHB_BOVIN  (P04837), FSHB_BUBBU  (Q6SV86), 
FSHB_CAPHI  (Q8HY83), FSHB_CAVPO  (Q9JK69), FSHB_CERNI  (Q8HY84), 
FSHB_GORGO  (A1BN60), FSHB_HORSE  (P01226), FSHB_HUMAN  (P01225), 
FSHB_MACFA  (Q6EV79), FSHB_MASCO  (Q6SI68), FSHB_MERUN  (Q6U830), 
FSHB_MONDO  (Q95J82), FSHB_MOUSE  (Q60687), FSHB_PANTA  (Q9BDJ0), 
FSHB_PANTR  (Q2PUH2), FSHB_PHOSU  (Q9QYB0), FSHB_PIG(P01228), 
FSHB_PONPY  (A1BN61), FSHB_RABIT  (Q6IY73), FSHB_RAT(P18427), 
FSHB_SAIBB  (Q3YC02), FSHB_SHEEP  (P01227), FSHB_STRCA  (P80663), 
FSHB_TRIVU  (O46430), GTHB1_ANGJA (Q9YGK3), GTHB1_CARAU (Q98848), 
GTHB1_CORAU (P48250), GTHB1_CYPCA (O13050), GTHB1_FUNHE (P30971), 
GTHB1_ICTPU (Q9DG81), GTHB1_MORSA (Q91120), GTHB1_ONCKE (P10257), 
GTHB1_ONCMA (P48252), GTHB1_THUOB (P37205), GTHB1_TRITC (Q9PW99), 
GTHB2_ACALA (Q90225), GTHB2_ANGAN (P27767), GTHB2_CARAU (Q98849), 
GTHB2_CLAGA (P53543), GTHB2_CLUPA (Q9YGH2), GTHB2_CORAU (P48251), 
GTHB2_CTEID (P30984), GTHB2_CYPCA (P01235), GTHB2_FUNHE (P30972), 
GTHB2_HYPMO (P37038), GTHB2_ICTPU (Q9DG80), GTHB2_MORSA (Q91121), 
GTHB2_ONCKE (P10256), GTHB2_ONCMA (P48253), GTHB2_ONCTS (P07732), 
GTHB2_THUOB (P37206), GTHB2_TRITC (Q9PW98), GTHB_MURCI  (P12837), 
LSHB_AILFU  (Q8HZR9), LSHB_AILME  (Q8WN18), LSHB_AQUCT  (P80071), 
LSHB_BALAC  (P33088), LSHB_BOVIN  (P04651), LSHB_CANLF  (P18842), 
LSHB_CERSI  (O77835), LSHB_COTJA  (P45657), LSHB_EQUAS  (P19794), 
LSHB_EQUQB  (O46641), LSHB_FELCA  (O77805), LSHB_GORGO  (Q2Q1P1), 
LSHB_HORSE  (P08751), LSHB_HUMAN  (P01229), LSHB_MACFA  (Q6EV78), 
LSHB_MELGA  (P45646), LSHB_MONDO  (Q95J85), LSHB_MOUSE  (O09108), 
LSHB_OSPRU  (O46483), LSHB_PANTA  (Q9BDI9), LSHB_PANTR  (Q2Q1P2), 
LSHB_PHYMC  (P25330), LSHB_PIG(P01232), LSHB_PONPY  (Q2Q1P0), 
LSHB_RABIT  (Q6IY74), LSHB_RAT(P01230), LSHB_SHEEP  (P01231), 
LSHB_STRCA  (P80664), LSHB_TRIVU  (O46482), TSHB_ANGAN  (Q08127), 
TSHB_ANGJA  (Q7ZZV4), TSHB_BOVIN  (P01223), TSHB_CANLF  (P54828), 
TSHB_CHICK  (O57340), TSHB_FELCA  (Q52R90), TSHB_HORSE  (Q28376), 
TSHB_HUMAN  (P01222), TSHB_LAMGL  (P79357), TSHB_MONDO  (Q95J88), 
TSHB_MOUSE  (P12656), TSHB_ONCMY  (P37240), TSHB_PHOSU  (Q62590), 
TSHB_PIG(P01224), TSHB_RAT(P04652), TSHB_SALSA  (O73824)
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CGHB_SAIBB  (Q3S2X5), GPHB5_HUMAN (Q86YW7), GPHB5_MOUSE (Q812B2)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

LSHB_PHOSU  (Q9QYA9)

		
PDB
[Detailed view]
15 PDB

1FL7; 1HCN; 1HRP; 1QFW; 1XWD; 4AY9; 4MQW; 6P57; 7FIG; 7FIH; 7FII; 7T9I; 7UTZ; 7XW5; 8I2G
» more