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PROSITE entry PS00698


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General information about the entry

Entry name [info] GH9_3
Accession [info] PS00698
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-1992 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00511
Associated ProRule [info] PRU10060

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 9 (GH9) active site signature 3.
Pattern [info] 
[FYW]-x-D-x(4)-[FYW]-x(3)-E-x-[STA]-x(3)-N-[STA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 52 in 52 different sequences
Number of true positive hits 50 in 50 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 23
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 96.15 %
Recall (true positives / (true positives + false negatives)) 68.49 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 2
Site [info] active_site at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 50 sequences 

BGH9A_BACO1 (A7LXT3), CELK_ACET2  (A3DCH1), CELK_ACETH  (P0C2S1), 

GUN10_ORYSJ (Q84R49), GUN11_ORYSJ (Q7XTH4), GUN12_ORYSJ (Q7XUK4), 
GUN13_ORYSI (A2XYW8), GUN13_ORYSJ (Q0J930), GUN15_ORYSJ (Q6L4I2), 
GUN17_ARATH (O81416), GUN17_ORYSJ (Q652F9), GUN18_ARATH (Q9SZ90), 
GUN19_ARATH (Q8L7I0), GUN19_ORYSJ (Q6YXT7), GUN1_ARATH  (Q9SRX3), 
GUN1_ORYSJ  (Q5NAT8), GUN1_PERAE  (P05522), GUN1_STRRE  (Q05156), 
GUN20_ARATH (Q9SUS0), GUN21_ARATH (Q9STW8), GUN23_ORYSJ (Q69NF5), 
GUN24_ARATH (Q93YQ7), GUN25_ARATH (Q38890), GUN2_ORYSJ  (Q5NAT0), 
GUN2_PERAE  (P23666), GUN3_ARATH  (Q2V4L8), GUN4_ARATH  (O49296), 
GUN4_BACS5  (P28622), GUN4_ORYSJ  (Q6Z715), GUN4_THEFU  (P26221), 
GUN6_ARATH  (Q42059), GUN6_DICDI  (P22699), GUN6_ORYSJ  (Q6Z2J3), 
GUN7_ARATH  (O04478), GUN8_ARATH  (Q9CAC1), GUN9_ARATH  (Q9C9H5), 
GUN9_ORYSJ  (P0C1U4), GUNA_BACPU  (Q5YLG1), GUNA_CALSA  (P22534), 
GUNA_CELJU  (P10476), GUNB_CELFI  (P26225), GUNC_BUTFI  (P23658), 
GUNC_CELFA  (P14090), GUND_ACET2  (A3DDN1), GUND_ACETH  (P0C2S4), 
GUNF_ACET2  (P26224), GUNG_RUMCH  (P37700), GUNI_ACET2  (Q02934), 
GUNZ_THEST  (P23659), GUN_PHAVU   (P22503)
» more

UniProtKB/Swiss-Prot
False negative sequences		 23 sequences 

GUN10_ARATH (Q8LCP6), GUN11_ARATH (O48766), GUN12_ARATH (O64889), 

GUN13_ARATH (O64890), GUN14_ARATH (Q8S8Q4), GUN14_ORYSJ (P0C1U5), 
GUN15_ARATH (O80497), GUN16_ARATH (Q8VYG3), GUN16_ORYSJ (Q654U4), 
GUN18_ORYSJ (Q5Z9P8), GUN20_ORYSJ (Q6ZA06), GUN21_ORYSJ (Q84Q51), 
GUN22_ARATH (Q9SVJ4), GUN22_ORYSJ (Q6H3Z9), GUN23_ARATH (Q8GY58), 
GUN24_ORYSJ (Q69SG5), GUN2_ARATH  (Q9FXI9), GUN3_ORYSJ  (Q8LQ92), 
GUN5_ARATH  (Q9M995), GUN5_ORYSJ  (Q67UW5), GUN7_ORYSJ  (Q6Z5P2), 
GUN8_ORYSJ  (Q6K7G9), GUNA_FIBSU  (P23665)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

GUNX_PRUPE  (P38534)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
NUSB_BRADU  (Q89K81), NUSB_RHOPB  (Q214H2)


				
	

	

		PDB
[Detailed view]		
		
			13 PDB
			


			1CLC; 1G87; 1GA2; 1JS4; 1K72; 1KFG; 1TF4; 2XFG; 3TF4; 4CJ0; 4CJ1; 4TF4; 
			
				6DHT
			
			

			» more