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PROSITE entry PS00699


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PURL: https://purl.expasy.org/prosite/signature/PS00699

Direct ScanProsite submission
General information about the entry

Entry name [info] NITROGENASE_1_1
Accession [info] PS00699
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-NOV-1995 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00085

Name and characterization of the entry

Description [info] Nitrogenases component 1 alpha and beta subunits signature 1.
Pattern [info] 
[LIVMFYH]-[LIVMFST]-H-[AG]-[AGSP]-[LIVMNQA]-[AG]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 87 in 87 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 1
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 6
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 91.86 %
Recall (true positives / (true positives + false negatives)) 92.94 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur(?) at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 79 sequences 

ANFD_AZOVI  (P16266), ANFD_HELGE  (O68955), ANFD_RHOCA  (Q07933), 

ANFD_RUMHU  (Q46082), ANFK_AZOVI  (P16267), ANFK_RHOCA  (Q07935), 
ANFK_RUMHU  (Q46084), NIFD_ACIFI  (P06662), NIFD_ALCFA  (Q44045), 
NIFD_AZOBR  (P25313), NIFD_AZOVI  (P07328), NIFD_BRADU  (P06121), 
NIFD_BRASP  (P06120), NIFD_CLOPA  (P00467), NIFD_CROS5  (O07642), 
NIFD_FRAAL  (Q02452), NIFD_HERSE  (P77874), NIFD_KLEPN  (P00466), 
NIFD_LEPBY  (Q00239), NIFD_METBA  (P55170), NIFD_METTL  (P20620), 
NIFD_NOSCO  (P52337), NIFD_NOSS1  (P00464), NIFD_RHICP  (P06769), 
NIFD_RHILT  (P00465), NIFD_RHOCA  (P08717), NIFD_RIPO1  (Q55029), 
NIFD_SINFN  (P19066), NIFE_AZOVI  (P08293), NIFE_BRADU  (P26506), 
NIFE_CLOPA  (P10996), NIFE_KLEPN  (P08737), NIFE_METBA  (P51755), 
NIFE_METMI  (P0CW54), NIFE_METMP  (P0CW55), NIFE_METTH  (O27607), 
NIFE_METTM  (P95297), NIFE_NOSS1  (Q44144), NIFE_RHILO  (Q98AP4), 
NIFE_RHIME  (Q92ZL2), NIFE_RHOCA  (P19055), NIFE_RIPO1  (O07355), 
NIFE_SINFN  (P55673), NIFK_ACIFI  (P15052), NIFK_AZOBR  (P25314), 
NIFK_AZOVI  (P07329), NIFK_BRADU  (P20621), NIFK_BRASP  (P06122), 
NIFK_CLOPA  (P11347), NIFK_CROS5  (O07643), NIFK_FRAAL  (Q57118), 
NIFK_HERSE  (P77875), NIFK_KLEPN  (P09772), NIFK_METBA  (P51754), 
NIFK_METMI  (P0CW52), NIFK_METMP  (P0CW53), NIFK_METTH  (O27606), 
NIFK_METTM  (P95296), NIFK_RIPO1  (Q55030), NIFK_SINFN  (P19067), 
NIFN_AZOVI  (P10336), NIFN_BRADU  (P26507), NIFN_HERSE  (O87627), 
NIFN_KLEPN  (P08738), NIFN_NOSS1  (Q44145), NIFN_RHILO  (Q98AP3), 
NIFN_RHIME  (P12781), NIFN_RHOCA  (P19077), NIFN_RIPO1  (O07356), 
NIFN_SINFN  (P55674), VNFD_AZOCH  (P15332), VNFD_AZOPA  (O68953), 
VNFD_AZOSA  (O68954), VNFD_AZOVI  (P16855), VNFK_AZOCH  (P15334), 
VNFK_AZOPA  (O68949), VNFK_AZOSA  (O68952), VNFK_AZOVI  (P16856), 
VNFK_TRIV2  (Q57302)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

NIFD_METMI  (P0CW50), NIFD_METMP  (P0CW51), NIFD_METTH  (O27605), 

NIFD_METTM  (Q50788), NIFK_METTL  (P20622), NIFK_NOSS1  (P00468)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

NIFD_ANASL  (P33177), NIFD_METIV  (P51605)


				
	

	

		UniProtKB/Swiss-Prot
'Unknown' sequences		
		
			1 sequence
			


			
Y584_MYCTU  (O86365)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			7 sequences
			


			
CETP_CHICK  (Q3V6R6), MDGA1_CHICK (Q0WYX8), MDGA1_HUMAN (Q8NFP4), 

			
MDGA1_MOUSE (Q0PMG2), MDGA1_RAT   (P85171), NAGA_VIBFU  (P96166), 
Y025_OSHVF  (Q6R7J8)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			87 PDB
			


			pdb_00001fp4; pdb_00001g20; pdb_00001g21; pdb_00001h1l; pdb_00001l5h; pdb_00001m1n; pdb_00001m1y; pdb_00001m34; pdb_00001mio; pdb_00001n2c; pdb_00001qgu; pdb_00001qh1; 
			
				pdb_00001qh8; pdb_00002afh; pdb_00002afi; pdb_00002min; pdb_00003k1a; pdb_00003min; pdb_00003u7q; pdb_00004nd8; pdb_00004tku; pdb_00004tkv; pdb_00004wes; pdb_00004wn9; 
				pdb_00004wna; pdb_00004wza; pdb_00004wzb; pdb_00004xpi; pdb_00005bvg; pdb_00005bvh; pdb_00005cx1; pdb_00005n6y; pdb_00005vpw; pdb_00005vq3; pdb_00005vq4; pdb_00006bbl; 
				pdb_00006cdk; pdb_00006o7l; pdb_00006o7m; pdb_00006o7n; pdb_00006o7o; pdb_00006o7p; pdb_00006o7q; pdb_00006o7r; pdb_00006o7s; pdb_00006op1; pdb_00006op2; pdb_00006op3; 
				pdb_00006op4; pdb_00006ug0; pdb_00006vxt; pdb_00007adr; pdb_00007ady; pdb_00007aiz; pdb_00007jrf; pdb_00007mci; pdb_00007ut6; pdb_00007ut7; pdb_00007ut8; pdb_00007ut9; 
				pdb_00007uta; pdb_00008boq; pdb_00008bts; pdb_00008crs; pdb_00008dbx; pdb_00008dby; pdb_00008dfc; pdb_00008dfd; pdb_00008dpn; pdb_00008e3t; pdb_00008e3u; pdb_00008e3v; 
				pdb_00008enl; pdb_00008enm; pdb_00008enn; pdb_00008eno; pdb_00008p8g; pdb_00008rhp; pdb_00009cjb; pdb_00009cjc; pdb_00009cjd; pdb_00009cje; pdb_00009cjf; pdb_00009ctz; 
				pdb_00009cu0; pdb_00009cu1; pdb_00009cu2
			
			

			» more