Home  |  Contact
Entry: PS00700

General information about the entry

Entry name [info] RIBOSOMAL_L6_2
Accession [info] PS00700
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
18-SEP-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00454

Name and characterization of the entry

Description [info] Ribosomal protein L6 signature 2.
Pattern [info] 
[QLS]-x(3)-[LIVM]-x(2)-[KRWYF]-x(2)-R-x-F-x-D-G-[LIVM]-[YF]-[LIVM]-x(2)-
[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_08 which contains 560'823 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 54 sequences 

RL6_AERPE   (Q9YF91    ), RL6_ARCFU   (O28370    ), RL6_HALMA   (P14135    ), 

RL6_HALSA   (Q9HPB8    ), RL6_HALWD   (Q18GG5    ), RL6_HYPBU   (A2BMD5    ), 
RL6_IGNH4   (A8AC04    ), RL6_META3   (A6UWV4    ), RL6_METAC   (Q8TRT1    ), 
RL6_METAR   (Q0W1X2    ), RL6_METBF   (Q46GB1    ), RL6_METBU   (Q12ZT5    ), 
RL6_METJA   (P54042    ), RL6_METKA   (Q8TW14    ), RL6_METM5   (A4FWA5    ), 
RL6_METM6   (A9A9P8    ), RL6_METM7   (A6VH01    ), RL6_METMA   (Q8PV34    ), 
RL6_METMP   (Q6LXD7    ), RL6_METS3   (A5UL72    ), RL6_METST   (Q2NFX3    ), 
RL6_METTH   (O26127    ), RL6_METTP   (A0B9V4    ), RL6_METVA   (P14030    ), 
RL6_METVS   (A6UQ60    ), RL6_PYRAB   (Q9V1V1    ), RL6_PYRFU   (Q8U015    ), 
RL6_PYRHO   (O59433    ), RL6_SACS2   (Q9UX91    ), RL6_SULAC   (O05637    ), 
RL6_SULTO   (Q975J6    ), RL6_THEGJ   (C5A269    ), RL6_THEKO   (Q5JJG4    ), 
RL6_THEON   (B6YSN0    ), RL91_ARATH  (P49209    ), RL92_ARATH  (Q9SZX9    ), 
RL9A_SCHPO  (Q10232    ), RL9A_YEAST  (P05738    ), RL9B_SCHPO  (O74905    ), 
RL9B_YEAST  (P51401    ), RL9_BOVIN   (Q3SYR7    ), RL9_CAEEL   (Q95Y90    ), 
RL9_DICDI   (Q54XI5    ), RL9_DROME   (P50882    ), RL9_HUMAN   (P32969    ), 
RL9_ICTPU   (Q90YW0    ), RL9_MACFA   (Q5IFJ7    ), RL9_MOUSE   (P51410    ), 
RL9_ORYSJ   (P49210    ), RL9_PEA     (P30707    ), RL9_PONAB   (Q5R9Q7    ), 
RL9_RAT     (P17077    ), RL9_SPOFR   (Q963B7    ), RL9_TETTS   (Q22AX5    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL6_DESA1   (B8D5V4    ), RL6_METHJ   (Q2FSG5    ), RL6_NANEQ   (Q74MR6    ), 

RL6_NATPD   (Q3IMX2    ), RL6_PICTO   (Q6L1B1    ), RL6_PYRAE   (Q8ZVA7    ), 
RL6_STAMF   (A3DNC3    ), RL6_THEAC   (Q9HIS3    ), RL6_THEVO   (Q97BW0    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

RL9_HAECO   (O02376    )


				
	

	

		PDB
[Detailed view]		
		
			74 PDB
			


			1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 
			
				1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 
				1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 
				1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 
				3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 
				3G4S; 3G6E; 3G71; 3I55; 3I56; 3J16; 3OW2; 4ADX; 5AN9; 5ANB; 5ANC; 5Z3G; 
				6EM5; 6QKL
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission