PROSITE logo

PROSITE entry PS00700


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L6_2
Accession [info] PS00700
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00454

Name and characterization of the entry

Description [info] Ribosomal protein L6 signature 2.
Pattern [info] 
[QLS]-x(3)-[LIVM]-x(2)-[KRWYF]-x(2)-R-x-F-x-D-G-[LIVM]-[YF]-[LIVM]-x(2)-
[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 55 in 55 different sequences
Number of true positive hits 55 in 55 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.94 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 55 sequences 

RL6_AERPE   (Q9YF91), RL6_ARCFU   (O28370), RL6_HALMA   (P14135), 

RL6_HALSA   (Q9HPB8), RL6_HALWD   (Q18GG5), RL6_HYPBU   (A2BMD5), 
RL6_IGNH4   (A8AC04), RL6_META3   (A6UWV4), RL6_METAC   (Q8TRT1), 
RL6_METAR   (Q0W1X2), RL6_METBF   (Q46GB1), RL6_METBU   (Q12ZT5), 
RL6_METJA   (P54042), RL6_METKA   (Q8TW14), RL6_METM5   (A4FWA5), 
RL6_METM6   (A9A9P8), RL6_METM7   (A6VH01), RL6_METMA   (Q8PV34), 
RL6_METMP   (Q6LXD7), RL6_METS3   (A5UL72), RL6_METST   (Q2NFX3), 
RL6_METTH   (O26127), RL6_METTP   (A0B9V4), RL6_METVA   (P14030), 
RL6_METVS   (A6UQ60), RL6_PYRAB   (Q9V1V1), RL6_PYRFU   (Q8U015), 
RL6_PYRHO   (O59433), RL6_SACS2   (Q9UX91), RL6_SULAC   (O05637), 
RL6_SULTO   (Q975J6), RL6_THEGJ   (C5A269), RL6_THEKO   (Q5JJG4), 
RL6_THEON   (B6YSN0), RL91_ARATH  (P49209), RL92_ARATH  (Q9SZX9), 
RL9A_SCHPO  (Q10232), RL9A_YEAST  (P05738), RL9B_CANAL  (Q5AEN2), 
RL9B_SCHPO  (O74905), RL9B_YEAST  (P51401), RL9_BOVIN   (Q3SYR7), 
RL9_CAEEL   (Q95Y90), RL9_DICDI   (Q54XI5), RL9_DROME   (P50882), 
RL9_HUMAN   (P32969), RL9_ICTPU   (Q90YW0), RL9_MACFA   (Q5IFJ7), 
RL9_MOUSE   (P51410), RL9_ORYSJ   (P49210), RL9_PEA (P30707), 
RL9_PONAB   (Q5R9Q7), RL9_RAT (P17077), RL9_SPOFR   (Q963B7), 
RL9_TETTS   (Q22AX5)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL6_DESA1   (B8D5V4), RL6_METHJ   (Q2FSG5), RL6_NANEQ   (Q74MR6), 

RL6_NATPD   (Q3IMX2), RL6_PICTO   (Q6L1B1), RL6_PYRAE   (Q8ZVA7), 
RL6_STAMF   (A3DNC3), RL6_THEAC   (Q9HIS3), RL6_THEVO   (Q97BW0)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

RL9_HAECO   (O02376)


				
	

	

		PDB
[Detailed view]		
		
			311 PDB
			


			1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 
			
				1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 
				1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 
				1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 
				3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 
				3G4S; 3G6E; 3G71; 3I55; 3I56; 3J16; 3J6X; 3J6Y; 3J77; 3J78; 3JCT; 3OW2; 
				4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 
				4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4B; 4V4N; 4V6I; 4V6U; 4V6W; 
				4V6X; 4V7F; 4V7R; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5AJ0; 5AN9; 
				5ANB; 5ANC; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 
				5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 
				5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 
				5Z3G; 6ELZ; 6EM1; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 
				6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 
				6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QKL; 
				6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SKF; 6SKG; 
				6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 
				6XA1; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 
				6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 7AZY; 7B7D; 7BHP; 
				7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 7NRC; 
				7NRD; 7OF1; 7OH3; 7OHP; 7OHQ; 7OHR; 7OHS; 7OHT; 7OHU; 7OHV; 7OHW; 7OHX; 
				7OHY; 7OSA; 7OSM; 7OW7; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QVP; 7R7A; 
				7RR5; 7TOO; 7TOP; 7U0H; 7UG6; 7UOO; 7UQB; 7UQZ; 7V08; 7XNX; 7XNY; 7Z34; 
				7ZPQ; 7ZRS; 7ZS5; 7ZUX; 7ZW0; 8A3D; 8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 
				8AGZ; 8BIP; 8BJQ; 8BQX; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 8ETI; 8ETJ; 8EUG; 
				8EUI; 8EUP; 8EUY; 8EV3; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 8GLP; 8HFR
			
			

			» more